BLASTX nr result

ID: Cinnamomum24_contig00030764 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cinnamomum24_contig00030764
         (241 letters)

Database: ./nr 
           77,306,371 sequences; 28,104,191,420 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_010257692.1| PREDICTED: uncharacterized protein LOC104597...    68   3e-09
ref|XP_010276397.1| PREDICTED: uncharacterized protein LOC104611...    64   3e-08
ref|XP_010276396.1| PREDICTED: uncharacterized protein LOC104611...    64   3e-08
ref|XP_010276395.1| PREDICTED: uncharacterized protein LOC104611...    64   3e-08
ref|XP_010276394.1| PREDICTED: uncharacterized protein LOC104611...    64   3e-08
ref|XP_002523406.1| RNA binding protein, putative [Ricinus commu...    59   1e-06
ref|XP_006368531.1| hypothetical protein POPTR_0001s03990g [Popu...    58   3e-06
ref|XP_009339193.1| PREDICTED: pumilio homolog 12-like [Pyrus x ...    57   7e-06
ref|XP_008384371.1| PREDICTED: pumilio homolog 12 [Malus domesti...    57   7e-06
gb|KDO54470.1| hypothetical protein CISIN_1g004281mg [Citrus sin...    56   9e-06
ref|XP_006445575.1| hypothetical protein CICLE_v10017802mg [Citr...    56   9e-06

>ref|XP_010257692.1| PREDICTED: uncharacterized protein LOC104597686 [Nelumbo nucifera]
          Length = 874

 Score = 67.8 bits (164), Expect = 3e-09
 Identities = 35/79 (44%), Positives = 53/79 (67%), Gaps = 2/79 (2%)
 Frame = +2

Query: 11  GSNPAFYSSLNFQRPSS--MNSFTSPFNQRLHSDGSPDKVKISEQNEYKTPIADINQVES 184
           GSN  FY  L F+R S+  +N      NQ+L  +G+ D  KI  ++ +++P+ +++Q +S
Sbjct: 72  GSNSTFYDGLAFERTSANCVNPSQCSTNQKLQINGNLDGGKIIVKSAHQSPVKNVDQDDS 131

Query: 185 NLPDDQSLTSAFAGMSFKE 241
           NLPDDQSL SAFA +SFK+
Sbjct: 132 NLPDDQSLNSAFADLSFKD 150


>ref|XP_010276397.1| PREDICTED: uncharacterized protein LOC104611153 isoform X4 [Nelumbo
           nucifera] gi|720065921|ref|XP_010276398.1| PREDICTED:
           uncharacterized protein LOC104611153 isoform X4 [Nelumbo
           nucifera]
          Length = 871

 Score = 64.3 bits (155), Expect = 3e-08
 Identities = 34/79 (43%), Positives = 53/79 (67%), Gaps = 2/79 (2%)
 Frame = +2

Query: 11  GSNPAFYSSLNFQRPSS--MNSFTSPFNQRLHSDGSPDKVKISEQNEYKTPIADINQVES 184
           GSN AFY  L F+RPS+  +N      +++L  + +    KI  +N +++P+ +++  +S
Sbjct: 71  GSNSAFYDGLAFERPSTTCLNYSQVLTDEKLQPNRNLSGGKIILKNAHQSPVKNVDHDDS 130

Query: 185 NLPDDQSLTSAFAGMSFKE 241
           NLPDDQSLTSAFA +SFK+
Sbjct: 131 NLPDDQSLTSAFAELSFKD 149


>ref|XP_010276396.1| PREDICTED: uncharacterized protein LOC104611153 isoform X3 [Nelumbo
           nucifera]
          Length = 908

 Score = 64.3 bits (155), Expect = 3e-08
 Identities = 34/79 (43%), Positives = 53/79 (67%), Gaps = 2/79 (2%)
 Frame = +2

Query: 11  GSNPAFYSSLNFQRPSS--MNSFTSPFNQRLHSDGSPDKVKISEQNEYKTPIADINQVES 184
           GSN AFY  L F+RPS+  +N      +++L  + +    KI  +N +++P+ +++  +S
Sbjct: 108 GSNSAFYDGLAFERPSTTCLNYSQVLTDEKLQPNRNLSGGKIILKNAHQSPVKNVDHDDS 167

Query: 185 NLPDDQSLTSAFAGMSFKE 241
           NLPDDQSLTSAFA +SFK+
Sbjct: 168 NLPDDQSLTSAFAELSFKD 186


>ref|XP_010276395.1| PREDICTED: uncharacterized protein LOC104611153 isoform X2 [Nelumbo
           nucifera]
          Length = 918

 Score = 64.3 bits (155), Expect = 3e-08
 Identities = 34/79 (43%), Positives = 53/79 (67%), Gaps = 2/79 (2%)
 Frame = +2

Query: 11  GSNPAFYSSLNFQRPSS--MNSFTSPFNQRLHSDGSPDKVKISEQNEYKTPIADINQVES 184
           GSN AFY  L F+RPS+  +N      +++L  + +    KI  +N +++P+ +++  +S
Sbjct: 118 GSNSAFYDGLAFERPSTTCLNYSQVLTDEKLQPNRNLSGGKIILKNAHQSPVKNVDHDDS 177

Query: 185 NLPDDQSLTSAFAGMSFKE 241
           NLPDDQSLTSAFA +SFK+
Sbjct: 178 NLPDDQSLTSAFAELSFKD 196


>ref|XP_010276394.1| PREDICTED: uncharacterized protein LOC104611153 isoform X1 [Nelumbo
           nucifera]
          Length = 929

 Score = 64.3 bits (155), Expect = 3e-08
 Identities = 34/79 (43%), Positives = 53/79 (67%), Gaps = 2/79 (2%)
 Frame = +2

Query: 11  GSNPAFYSSLNFQRPSS--MNSFTSPFNQRLHSDGSPDKVKISEQNEYKTPIADINQVES 184
           GSN AFY  L F+RPS+  +N      +++L  + +    KI  +N +++P+ +++  +S
Sbjct: 129 GSNSAFYDGLAFERPSTTCLNYSQVLTDEKLQPNRNLSGGKIILKNAHQSPVKNVDHDDS 188

Query: 185 NLPDDQSLTSAFAGMSFKE 241
           NLPDDQSLTSAFA +SFK+
Sbjct: 189 NLPDDQSLTSAFAELSFKD 207


>ref|XP_002523406.1| RNA binding protein, putative [Ricinus communis]
           gi|223537356|gb|EEF38985.1| RNA binding protein,
           putative [Ricinus communis]
          Length = 771

 Score = 58.9 bits (141), Expect = 1e-06
 Identities = 28/61 (45%), Positives = 39/61 (63%)
 Frame = +2

Query: 53  PSSMNSFTSPFNQRLHSDGSPDKVKISEQNEYKTPIADINQVESNLPDDQSLTSAFAGMS 232
           P  MNSF     ++L S+GSP++ K+      ++PI  +   E+NLPDDQSLTSAF  +S
Sbjct: 42  PICMNSFEGRLTEKLQSNGSPNERKLLISKNQESPIKRVQSEEANLPDDQSLTSAFTDLS 101

Query: 233 F 235
           F
Sbjct: 102 F 102


>ref|XP_006368531.1| hypothetical protein POPTR_0001s03990g [Populus trichocarpa]
           gi|550346467|gb|ERP65100.1| hypothetical protein
           POPTR_0001s03990g [Populus trichocarpa]
          Length = 756

 Score = 57.8 bits (138), Expect = 3e-06
 Identities = 29/61 (47%), Positives = 39/61 (63%)
 Frame = +2

Query: 53  PSSMNSFTSPFNQRLHSDGSPDKVKISEQNEYKTPIADINQVESNLPDDQSLTSAFAGMS 232
           P S+NSF  PF ++L S+GS D  +I      ++P  +    E+NLPDDQSLT AFA +S
Sbjct: 46  PVSVNSFKGPFIEKLESNGSLDDRQILANKTQQSPTTNAQSEEANLPDDQSLTLAFAELS 105

Query: 233 F 235
           F
Sbjct: 106 F 106


>ref|XP_009339193.1| PREDICTED: pumilio homolog 12-like [Pyrus x bretschneideri]
           gi|694422738|ref|XP_009339194.1| PREDICTED: pumilio
           homolog 12-like [Pyrus x bretschneideri]
          Length = 779

 Score = 56.6 bits (135), Expect = 7e-06
 Identities = 27/61 (44%), Positives = 40/61 (65%)
 Frame = +2

Query: 53  PSSMNSFTSPFNQRLHSDGSPDKVKISEQNEYKTPIADINQVESNLPDDQSLTSAFAGMS 232
           P  +NS   P + +LH++G  D+ K S +   K+P+  + +  +NLPDDQSLTSA AG+S
Sbjct: 42  PICVNSCKGPLSDKLHNNGRLDEGKNSAKKIQKSPVKRVQREVTNLPDDQSLTSALAGLS 101

Query: 233 F 235
           F
Sbjct: 102 F 102


>ref|XP_008384371.1| PREDICTED: pumilio homolog 12 [Malus domestica]
           gi|657984554|ref|XP_008384372.1| PREDICTED: pumilio
           homolog 12 [Malus domestica]
           gi|657984556|ref|XP_008384373.1| PREDICTED: pumilio
           homolog 12 [Malus domestica]
           gi|657984558|ref|XP_008384374.1| PREDICTED: pumilio
           homolog 12 [Malus domestica]
          Length = 776

 Score = 56.6 bits (135), Expect = 7e-06
 Identities = 27/61 (44%), Positives = 40/61 (65%)
 Frame = +2

Query: 53  PSSMNSFTSPFNQRLHSDGSPDKVKISEQNEYKTPIADINQVESNLPDDQSLTSAFAGMS 232
           P  +NS   P + +LH++G  D+ K S +   K+P+  + +  +NLPDDQSLTSA AG+S
Sbjct: 42  PICVNSCKGPLSDKLHNNGRLDEGKNSAKKIQKSPVKRVQREVTNLPDDQSLTSALAGLS 101

Query: 233 F 235
           F
Sbjct: 102 F 102


>gb|KDO54470.1| hypothetical protein CISIN_1g004281mg [Citrus sinensis]
          Length = 764

 Score = 56.2 bits (134), Expect = 9e-06
 Identities = 31/76 (40%), Positives = 45/76 (59%)
 Frame = +2

Query: 8   QGSNPAFYSSLNFQRPSSMNSFTSPFNQRLHSDGSPDKVKISEQNEYKTPIADINQVESN 187
           + + P   SS     P ++NS   P  ++L ++G+ D+ KI      ++PI  I Q E+N
Sbjct: 31  EDTGPKRVSSNYILPPITVNSSKGPLAEKLKNNGNLDEGKILVNKSQQSPIKRIPQEEAN 90

Query: 188 LPDDQSLTSAFAGMSF 235
           LPDDQSLTSAFA + F
Sbjct: 91  LPDDQSLTSAFAELRF 106


>ref|XP_006445575.1| hypothetical protein CICLE_v10017802mg [Citrus clementina]
           gi|568871549|ref|XP_006488946.1| PREDICTED: pumilio
           homolog 12-like isoform X1 [Citrus sinensis]
           gi|568871551|ref|XP_006488947.1| PREDICTED: pumilio
           homolog 12-like isoform X2 [Citrus sinensis]
           gi|557548186|gb|ESR58815.1| hypothetical protein
           CICLE_v10017802mg [Citrus clementina]
          Length = 769

 Score = 56.2 bits (134), Expect = 9e-06
 Identities = 31/76 (40%), Positives = 45/76 (59%)
 Frame = +2

Query: 8   QGSNPAFYSSLNFQRPSSMNSFTSPFNQRLHSDGSPDKVKISEQNEYKTPIADINQVESN 187
           + + P   SS     P ++NS   P  ++L ++G+ D+ KI      ++PI  I Q E+N
Sbjct: 31  EDTGPKRVSSNYILPPITVNSSKGPLAEKLKNNGNLDEGKILVNKSQQSPIKRIPQEEAN 90

Query: 188 LPDDQSLTSAFAGMSF 235
           LPDDQSLTSAFA + F
Sbjct: 91  LPDDQSLTSAFAELRF 106


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