BLASTX nr result

ID: Cinnamomum24_contig00030753 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cinnamomum24_contig00030753
         (231 letters)

Database: ./nr 
           77,306,371 sequences; 28,104,191,420 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_010257503.1| PREDICTED: pentatricopeptide repeat-containi...   119   1e-24
ref|XP_008448023.1| PREDICTED: pentatricopeptide repeat-containi...   101   3e-19
ref|XP_004148551.1| PREDICTED: pentatricopeptide repeat-containi...   100   4e-19
emb|CDX75017.1| BnaA05g07630D [Brassica napus]                         99   2e-18
gb|KFK36547.1| hypothetical protein AALP_AA4G138000 [Arabis alpina]    99   2e-18
gb|KFK36546.1| hypothetical protein AALP_AA4G138000 [Arabis alpina]    99   2e-18
ref|XP_012084708.1| PREDICTED: ATP-dependent zinc metalloproteas...    98   3e-18
ref|XP_002881465.1| pentatricopeptide repeat-containing protein ...    98   3e-18
ref|XP_009143560.1| PREDICTED: LOW QUALITY PROTEIN: pentatricope...    97   4e-18
ref|XP_006410847.1| hypothetical protein EUTSA_v10017676mg [Eutr...    97   4e-18
ref|XP_006295397.1| hypothetical protein CARUB_v10024492mg [Caps...    97   5e-18
ref|XP_006431157.1| hypothetical protein CICLE_v10011507mg [Citr...    96   8e-18
ref|XP_002283393.2| PREDICTED: ATP-dependent zinc metalloproteas...    96   8e-18
emb|CAN80116.1| hypothetical protein VITISV_032528 [Vitis vinifera]    96   8e-18
ref|XP_010553997.1| PREDICTED: pentatricopeptide repeat-containi...    95   2e-17
ref|XP_013752267.1| PREDICTED: pentatricopeptide repeat-containi...    94   3e-17
ref|XP_013634335.1| PREDICTED: pentatricopeptide repeat-containi...    94   3e-17
emb|CDY33187.1| BnaC04g08520D [Brassica napus]                         94   3e-17
ref|XP_002885008.1| hypothetical protein ARALYDRAFT_478816 [Arab...    94   3e-17
ref|XP_006482602.1| PREDICTED: ATP-dependent zinc metalloproteas...    94   4e-17

>ref|XP_010257503.1| PREDICTED: pentatricopeptide repeat-containing protein At2g36730
           [Nelumbo nucifera]
          Length = 515

 Score =  119 bits (297), Expect = 1e-24
 Identities = 56/76 (73%), Positives = 65/76 (85%)
 Frame = -1

Query: 228 PREAVALFVEMKRRRTRPNKLTFPFLLKACSQLSDLQRGKQIQADVVKNGVDSDIYIQNT 49
           PREA+A+F+EM+ R  +PNKLTFPFLLKAC+ LS LQ G+QIQAD VK+GVDSDIY+QNT
Sbjct: 110 PREAIAVFLEMRSRGVKPNKLTFPFLLKACAHLSALQEGRQIQADAVKHGVDSDIYVQNT 169

Query: 48  LIRFYGSCKEIFDARR 1
           LI  YGSC EI DARR
Sbjct: 170 LIHLYGSCGEISDARR 185


>ref|XP_008448023.1| PREDICTED: pentatricopeptide repeat-containing protein At2g36730
           isoform X1 [Cucumis melo]
          Length = 516

 Score =  101 bits (251), Expect = 3e-19
 Identities = 47/76 (61%), Positives = 59/76 (77%)
 Frame = -1

Query: 228 PREAVALFVEMKRRRTRPNKLTFPFLLKACSQLSDLQRGKQIQADVVKNGVDSDIYIQNT 49
           PREA++LF EM+RR   PN LTFPFLLKAC+ L+ LQ GKQ  A V+K G+D D+Y++NT
Sbjct: 112 PREAISLFGEMRRRGVIPNNLTFPFLLKACATLATLQEGKQFHAIVIKCGLDLDVYVRNT 171

Query: 48  LIRFYGSCKEIFDARR 1
           LI FYGSCK +  AR+
Sbjct: 172 LIHFYGSCKRMSGARK 187


>ref|XP_004148551.1| PREDICTED: pentatricopeptide repeat-containing protein At2g36730
           isoform X1 [Cucumis sativus] gi|700187960|gb|KGN43193.1|
           hypothetical protein Csa_7G007910 [Cucumis sativus]
          Length = 516

 Score =  100 bits (249), Expect = 4e-19
 Identities = 46/76 (60%), Positives = 59/76 (77%)
 Frame = -1

Query: 228 PREAVALFVEMKRRRTRPNKLTFPFLLKACSQLSDLQRGKQIQADVVKNGVDSDIYIQNT 49
           P+EA++LF EM+RR  RPN LTFPFLLKAC+ L+ LQ GKQ  A  +K G+D D+Y++NT
Sbjct: 112 PQEAISLFGEMRRRGVRPNNLTFPFLLKACATLATLQEGKQFHAIAIKCGLDLDVYVRNT 171

Query: 48  LIRFYGSCKEIFDARR 1
           LI FYGSCK +  AR+
Sbjct: 172 LIYFYGSCKRMSGARK 187


>emb|CDX75017.1| BnaA05g07630D [Brassica napus]
          Length = 473

 Score = 98.6 bits (244), Expect = 2e-18
 Identities = 44/76 (57%), Positives = 57/76 (75%)
 Frame = -1

Query: 228 PREAVALFVEMKRRRTRPNKLTFPFLLKACSQLSDLQRGKQIQADVVKNGVDSDIYIQNT 49
           P E++ ++ EMKRRR +PNKLTFPFLL AC+    L  G+QIQ DV+K+G DSD+Y+ N 
Sbjct: 90  PVESIRIYSEMKRRRIKPNKLTFPFLLNACASFLGLTAGRQIQVDVLKHGFDSDVYVGNN 149

Query: 48  LIRFYGSCKEIFDARR 1
           LI  YGSCK+  DAR+
Sbjct: 150 LIHLYGSCKKTSDARK 165


>gb|KFK36547.1| hypothetical protein AALP_AA4G138000 [Arabis alpina]
          Length = 429

 Score = 98.6 bits (244), Expect = 2e-18
 Identities = 44/76 (57%), Positives = 58/76 (76%)
 Frame = -1

Query: 228 PREAVALFVEMKRRRTRPNKLTFPFLLKACSQLSDLQRGKQIQADVVKNGVDSDIYIQNT 49
           P E++ ++ EMKRRR +PNKLTFPFLLKAC+    L  G+QIQ +V+K+G DSD+Y+ N 
Sbjct: 27  PVESILVYSEMKRRRIKPNKLTFPFLLKACASFFGLTAGRQIQVEVLKHGFDSDVYVGNN 86

Query: 48  LIRFYGSCKEIFDARR 1
           LI  YGSCK+  DAR+
Sbjct: 87  LIHLYGSCKKTSDARK 102


>gb|KFK36546.1| hypothetical protein AALP_AA4G138000 [Arabis alpina]
          Length = 430

 Score = 98.6 bits (244), Expect = 2e-18
 Identities = 44/76 (57%), Positives = 58/76 (76%)
 Frame = -1

Query: 228 PREAVALFVEMKRRRTRPNKLTFPFLLKACSQLSDLQRGKQIQADVVKNGVDSDIYIQNT 49
           P E++ ++ EMKRRR +PNKLTFPFLLKAC+    L  G+QIQ +V+K+G DSD+Y+ N 
Sbjct: 28  PVESILVYSEMKRRRIKPNKLTFPFLLKACASFFGLTAGRQIQVEVLKHGFDSDVYVGNN 87

Query: 48  LIRFYGSCKEIFDARR 1
           LI  YGSCK+  DAR+
Sbjct: 88  LIHLYGSCKKTSDARK 103


>ref|XP_012084708.1| PREDICTED: ATP-dependent zinc metalloprotease FTSH 6, chloroplastic
           [Jatropha curcas]
          Length = 1159

 Score = 97.8 bits (242), Expect = 3e-18
 Identities = 42/76 (55%), Positives = 57/76 (75%)
 Frame = -1

Query: 228 PREAVALFVEMKRRRTRPNKLTFPFLLKACSQLSDLQRGKQIQADVVKNGVDSDIYIQNT 49
           P+EA+ +F  M+R   RPN LT+PFLLKAC+    ++ GKQ+  DVVKNG+D D+Y+ N 
Sbjct: 753 PKEAIWVFRRMRREEIRPNYLTYPFLLKACATCFAIKEGKQVHVDVVKNGLDCDVYVNNN 812

Query: 48  LIRFYGSCKEIFDARR 1
           L+ FYGSCK+I DAR+
Sbjct: 813 LVHFYGSCKKIRDARK 828


>ref|XP_002881465.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata] gi|297327304|gb|EFH57724.1|
           pentatricopeptide repeat-containing protein [Arabidopsis
           lyrata subsp. lyrata]
          Length = 507

 Score = 97.8 bits (242), Expect = 3e-18
 Identities = 44/76 (57%), Positives = 58/76 (76%)
 Frame = -1

Query: 228 PREAVALFVEMKRRRTRPNKLTFPFLLKACSQLSDLQRGKQIQADVVKNGVDSDIYIQNT 49
           P E++ ++ EMKRRR +PNKLTFPFLLKAC+    L  G+QIQ +V+K+G DSD+Y+ N 
Sbjct: 94  PVESIWVYSEMKRRRIKPNKLTFPFLLKACASFLGLTAGRQIQVEVLKHGFDSDVYVGNN 153

Query: 48  LIRFYGSCKEIFDARR 1
           LI  YGSCK+  DAR+
Sbjct: 154 LIHLYGSCKKTSDARK 169


>ref|XP_009143560.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
           protein At2g36730 [Brassica rapa]
          Length = 502

 Score = 97.4 bits (241), Expect = 4e-18
 Identities = 43/76 (56%), Positives = 57/76 (75%)
 Frame = -1

Query: 228 PREAVALFVEMKRRRTRPNKLTFPFLLKACSQLSDLQRGKQIQADVVKNGVDSDIYIQNT 49
           P +++ ++ EMKRRR +PNKLTFPFLL AC+    L  G+QIQ DV+K+G DSD+Y+ N 
Sbjct: 90  PVDSIRIYSEMKRRRIKPNKLTFPFLLNACASFLGLTAGRQIQVDVLKHGFDSDVYVGNN 149

Query: 48  LIRFYGSCKEIFDARR 1
           LI  YGSCK+  DAR+
Sbjct: 150 LIHLYGSCKKTSDARK 165


>ref|XP_006410847.1| hypothetical protein EUTSA_v10017676mg [Eutrema salsugineum]
           gi|557112016|gb|ESQ52300.1| hypothetical protein
           EUTSA_v10017676mg [Eutrema salsugineum]
          Length = 514

 Score = 97.4 bits (241), Expect = 4e-18
 Identities = 44/76 (57%), Positives = 57/76 (75%)
 Frame = -1

Query: 228 PREAVALFVEMKRRRTRPNKLTFPFLLKACSQLSDLQRGKQIQADVVKNGVDSDIYIQNT 49
           P E++ ++ EMKRR   PNKLTFPFLLKAC+    L  G+QIQ +V+K+G DSD+Y+ N 
Sbjct: 101 PVESIWVYSEMKRRGIEPNKLTFPFLLKACASFFGLTAGRQIQVEVLKHGFDSDVYVGNN 160

Query: 48  LIRFYGSCKEIFDARR 1
           LI  YGSCK+ FDAR+
Sbjct: 161 LIHLYGSCKKAFDARK 176


>ref|XP_006295397.1| hypothetical protein CARUB_v10024492mg [Capsella rubella]
           gi|482564105|gb|EOA28295.1| hypothetical protein
           CARUB_v10024492mg [Capsella rubella]
          Length = 505

 Score = 97.1 bits (240), Expect = 5e-18
 Identities = 44/76 (57%), Positives = 57/76 (75%)
 Frame = -1

Query: 228 PREAVALFVEMKRRRTRPNKLTFPFLLKACSQLSDLQRGKQIQADVVKNGVDSDIYIQNT 49
           P E++ ++ EMKRRR  PNKLTFPFLLKAC+    L  G+QIQ +V+K+G DSD+Y+ N 
Sbjct: 94  PVESIWVYSEMKRRRINPNKLTFPFLLKACASFLGLTAGRQIQVEVLKHGFDSDVYVGNN 153

Query: 48  LIRFYGSCKEIFDARR 1
           LI  YGSCK+  DAR+
Sbjct: 154 LIHLYGSCKKTSDARK 169


>ref|XP_006431157.1| hypothetical protein CICLE_v10011507mg [Citrus clementina]
           gi|557533214|gb|ESR44397.1| hypothetical protein
           CICLE_v10011507mg [Citrus clementina]
           gi|641853762|gb|KDO72580.1| hypothetical protein
           CISIN_1g046312mg [Citrus sinensis]
          Length = 514

 Score = 96.3 bits (238), Expect = 8e-18
 Identities = 41/74 (55%), Positives = 58/74 (78%)
 Frame = -1

Query: 228 PREAVALFVEMKRRRTRPNKLTFPFLLKACSQLSDLQRGKQIQADVVKNGVDSDIYIQNT 49
           PREAV +F++MKRR  +P + T+PF+LKAC+++S L  G Q+QA+V K+G+DSD+Y  N 
Sbjct: 110 PREAVWVFIDMKRRGIKPTEFTYPFVLKACAEISGLNEGMQVQANVTKSGLDSDVYTNNN 169

Query: 48  LIRFYGSCKEIFDA 7
           L+RFYGSC+   DA
Sbjct: 170 LVRFYGSCRRKRDA 183


>ref|XP_002283393.2| PREDICTED: ATP-dependent zinc metalloprotease FTSH 6,
           chloroplastic-like [Vitis vinifera]
          Length = 1146

 Score = 96.3 bits (238), Expect = 8e-18
 Identities = 42/76 (55%), Positives = 58/76 (76%)
 Frame = -1

Query: 228 PREAVALFVEMKRRRTRPNKLTFPFLLKACSQLSDLQRGKQIQADVVKNGVDSDIYIQNT 49
           PREA+  ++EM+     P+KLTFP LLKAC+ +S    G++IQ DV+K+G+D ++Y+QNT
Sbjct: 741 PREAIGAYLEMRSLGISPDKLTFPILLKACAAISAFNEGRKIQVDVMKHGLDCNVYVQNT 800

Query: 48  LIRFYGSCKEIFDARR 1
           +I FYGSCK I DARR
Sbjct: 801 MIHFYGSCKRIRDARR 816


>emb|CAN80116.1| hypothetical protein VITISV_032528 [Vitis vinifera]
          Length = 505

 Score = 96.3 bits (238), Expect = 8e-18
 Identities = 42/76 (55%), Positives = 58/76 (76%)
 Frame = -1

Query: 228 PREAVALFVEMKRRRTRPNKLTFPFLLKACSQLSDLQRGKQIQADVVKNGVDSDIYIQNT 49
           PREA+  ++EM+     P+KLTFP LLKAC+ +S    G++IQ DV+K+G+D ++Y+QNT
Sbjct: 100 PREAIGAYLEMRSLGISPDKLTFPILLKACAXISAFNEGRKIQVDVMKHGLDCNVYVQNT 159

Query: 48  LIRFYGSCKEIFDARR 1
           +I FYGSCK I DARR
Sbjct: 160 MIHFYGSCKRIRDARR 175


>ref|XP_010553997.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g36730-like [Tarenaya hassleriana]
          Length = 506

 Score = 95.1 bits (235), Expect = 2e-17
 Identities = 43/76 (56%), Positives = 56/76 (73%)
 Frame = -1

Query: 228 PREAVALFVEMKRRRTRPNKLTFPFLLKACSQLSDLQRGKQIQADVVKNGVDSDIYIQNT 49
           P E++ ++ EMK+R  RPNKLTFPFLLKAC+    L  G+QIQ +V+K G DSD+Y+ N 
Sbjct: 101 PVESIRVYCEMKKRGIRPNKLTFPFLLKACASFFGLAAGRQIQVEVLKLGFDSDVYVGNN 160

Query: 48  LIRFYGSCKEIFDARR 1
           LI FYGSC +  DAR+
Sbjct: 161 LIHFYGSCNKTSDARK 176


>ref|XP_013752267.1| PREDICTED: pentatricopeptide repeat-containing protein At2g36730
           [Brassica napus]
          Length = 502

 Score = 94.4 bits (233), Expect = 3e-17
 Identities = 42/76 (55%), Positives = 56/76 (73%)
 Frame = -1

Query: 228 PREAVALFVEMKRRRTRPNKLTFPFLLKACSQLSDLQRGKQIQADVVKNGVDSDIYIQNT 49
           P +++ ++ EMKRRR +PNKLTFPFLL AC+    L  G+QIQ DV+K+G  SD+Y+ N 
Sbjct: 90  PVDSIRIYSEMKRRRIKPNKLTFPFLLNACASFLGLTAGRQIQVDVLKHGFASDVYVGNN 149

Query: 48  LIRFYGSCKEIFDARR 1
           LI  YGSCK+  DAR+
Sbjct: 150 LIHLYGSCKKTSDARK 165


>ref|XP_013634335.1| PREDICTED: pentatricopeptide repeat-containing protein At2g36730
           [Brassica oleracea var. oleracea]
           gi|923736352|ref|XP_013669889.1| PREDICTED:
           pentatricopeptide repeat-containing protein At2g36730
           [Brassica napus]
          Length = 502

 Score = 94.4 bits (233), Expect = 3e-17
 Identities = 42/76 (55%), Positives = 56/76 (73%)
 Frame = -1

Query: 228 PREAVALFVEMKRRRTRPNKLTFPFLLKACSQLSDLQRGKQIQADVVKNGVDSDIYIQNT 49
           P +++ ++ EMKRRR +PNKLTFPFLL AC+    L  G+QIQ DV+K+G  SD+Y+ N 
Sbjct: 90  PVDSIRIYSEMKRRRIKPNKLTFPFLLNACASFLGLTAGRQIQVDVLKHGFASDVYVGNN 149

Query: 48  LIRFYGSCKEIFDARR 1
           LI  YGSCK+  DAR+
Sbjct: 150 LIHLYGSCKKTSDARK 165


>emb|CDY33187.1| BnaC04g08520D [Brassica napus]
          Length = 473

 Score = 94.4 bits (233), Expect = 3e-17
 Identities = 42/76 (55%), Positives = 56/76 (73%)
 Frame = -1

Query: 228 PREAVALFVEMKRRRTRPNKLTFPFLLKACSQLSDLQRGKQIQADVVKNGVDSDIYIQNT 49
           P +++ ++ EMKRRR +PNKLTFPFLL AC+    L  G+QIQ DV+K+G  SD+Y+ N 
Sbjct: 90  PVDSIRIYSEMKRRRIKPNKLTFPFLLNACASFLGLTAGRQIQVDVLKHGFASDVYVGNN 149

Query: 48  LIRFYGSCKEIFDARR 1
           LI  YGSCK+  DAR+
Sbjct: 150 LIHLYGSCKKTSDARK 165


>ref|XP_002885008.1| hypothetical protein ARALYDRAFT_478816 [Arabidopsis lyrata subsp.
           lyrata] gi|297330848|gb|EFH61267.1| hypothetical protein
           ARALYDRAFT_478816, partial [Arabidopsis lyrata subsp.
           lyrata]
          Length = 369

 Score = 94.4 bits (233), Expect = 3e-17
 Identities = 42/76 (55%), Positives = 56/76 (73%)
 Frame = -1

Query: 228 PREAVALFVEMKRRRTRPNKLTFPFLLKACSQLSDLQRGKQIQADVVKNGVDSDIYIQNT 49
           P E++  + EM+RR   PNKLTFPFLLKAC+    L  G+QIQ +V+K+G DSD+Y+ N 
Sbjct: 88  PVESIWFYSEMERRGINPNKLTFPFLLKACASFLGLTAGRQIQVEVLKHGFDSDVYVGNN 147

Query: 48  LIRFYGSCKEIFDARR 1
           LI  YGSCK+ +DAR+
Sbjct: 148 LIHLYGSCKKTYDARK 163


>ref|XP_006482602.1| PREDICTED: ATP-dependent zinc metalloprotease FTSH 6,
            chloroplastic-like [Citrus sinensis]
          Length = 1197

 Score = 94.0 bits (232), Expect = 4e-17
 Identities = 40/74 (54%), Positives = 57/74 (77%)
 Frame = -1

Query: 228  PREAVALFVEMKRRRTRPNKLTFPFLLKACSQLSDLQRGKQIQADVVKNGVDSDIYIQNT 49
            PREAV + ++MKRR  +P + T+PF+LKAC+++S L  G Q+QA+V K+G+DSD+Y  N 
Sbjct: 793  PREAVWVLIDMKRRGIKPTEFTYPFVLKACAEISGLNEGMQVQANVTKSGLDSDVYTNNN 852

Query: 48   LIRFYGSCKEIFDA 7
            L+RFYGSC+   DA
Sbjct: 853  LVRFYGSCRRKRDA 866


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