BLASTX nr result
ID: Cinnamomum24_contig00030558
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Cinnamomum24_contig00030558
(514 letters)
Database: ./nr
77,306,371 sequences; 28,104,191,420 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_010023817.1| PREDICTED: DNA mismatch repair protein MSH1,... 72 1e-10
ref|XP_010023816.1| PREDICTED: DNA mismatch repair protein MSH1,... 72 1e-10
gb|KCW60181.1| hypothetical protein EUGRSUZ_H02905 [Eucalyptus g... 72 1e-10
gb|AIU48198.1| MSH1, partial [Cinnamomum camphora] 72 2e-10
ref|XP_010918844.1| PREDICTED: DNA mismatch repair protein MSH1,... 70 5e-10
ref|XP_008809666.1| PREDICTED: DNA mismatch repair protein MSH1,... 69 1e-09
gb|AIU48204.1| MSH1, partial [Trachycarpus fortunei] 68 2e-09
ref|XP_010264855.1| PREDICTED: DNA mismatch repair protein MSH1,... 68 3e-09
ref|XP_010264854.1| PREDICTED: DNA mismatch repair protein MSH1,... 68 3e-09
ref|XP_010264853.1| PREDICTED: DNA mismatch repair protein MSH1,... 68 3e-09
ref|XP_002448138.1| hypothetical protein SORBIDRAFT_06g021950 [S... 67 4e-09
gb|AIU48188.1| MSH1, partial [Dioscorea oppositifolia] 67 5e-09
ref|XP_011462423.1| PREDICTED: DNA mismatch repair protein MSH1,... 66 9e-09
gb|AIU48201.1| MSH1, partial [Houttuynia cordata] 66 9e-09
gb|AIU48193.1| MSH1, partial [Fragaria vesca] 66 9e-09
ref|XP_009341626.1| PREDICTED: DNA mismatch repair protein MSH1,... 66 9e-09
gb|AFW58800.1| DNA mismatch repair protein [Zea mays] 66 9e-09
ref|NP_001105898.1| DNA mismatch repair protein [Zea mays] gi|61... 66 9e-09
ref|XP_010326799.1| PREDICTED: DNA mismatch repair protein MSH1,... 66 1e-08
gb|AIU48178.1| MSH1, partial [Aristolochia tagala] 66 1e-08
>ref|XP_010023817.1| PREDICTED: DNA mismatch repair protein MSH1, mitochondrial isoform X2
[Eucalyptus grandis]
Length = 1148
Score = 72.4 bits (176), Expect = 1e-10
Identities = 35/46 (76%), Positives = 40/46 (86%)
Frame = -2
Query: 513 GKSVAG*LETLLINQLPNRGFRLVNKADGKHRNFGTSNLTSGNLIL 376
GKSVA LETLLINQLPNRGFRL N ADGKHRNFG+S L +GN+++
Sbjct: 1102 GKSVACQLETLLINQLPNRGFRLSNVADGKHRNFGSSTLHAGNMVV 1147
>ref|XP_010023816.1| PREDICTED: DNA mismatch repair protein MSH1, mitochondrial isoform X1
[Eucalyptus grandis]
Length = 1152
Score = 72.4 bits (176), Expect = 1e-10
Identities = 35/46 (76%), Positives = 40/46 (86%)
Frame = -2
Query: 513 GKSVAG*LETLLINQLPNRGFRLVNKADGKHRNFGTSNLTSGNLIL 376
GKSVA LETLLINQLPNRGFRL N ADGKHRNFG+S L +GN+++
Sbjct: 1106 GKSVACQLETLLINQLPNRGFRLSNVADGKHRNFGSSTLHAGNMVV 1151
>gb|KCW60181.1| hypothetical protein EUGRSUZ_H02905 [Eucalyptus grandis]
Length = 1057
Score = 72.4 bits (176), Expect = 1e-10
Identities = 35/46 (76%), Positives = 40/46 (86%)
Frame = -2
Query: 513 GKSVAG*LETLLINQLPNRGFRLVNKADGKHRNFGTSNLTSGNLIL 376
GKSVA LETLLINQLPNRGFRL N ADGKHRNFG+S L +GN+++
Sbjct: 1011 GKSVACQLETLLINQLPNRGFRLSNVADGKHRNFGSSTLHAGNMVV 1056
>gb|AIU48198.1| MSH1, partial [Cinnamomum camphora]
Length = 577
Score = 72.0 bits (175), Expect = 2e-10
Identities = 35/37 (94%), Positives = 35/37 (94%)
Frame = -2
Query: 513 GKSVAG*LETLLINQLPNRGFRLVNKADGKHRNFGTS 403
GKSVA LETLLINQLPNRGFRLVNKADGKHRNFGTS
Sbjct: 541 GKSVASQLETLLINQLPNRGFRLVNKADGKHRNFGTS 577
>ref|XP_010918844.1| PREDICTED: DNA mismatch repair protein MSH1, mitochondrial [Elaeis
guineensis]
Length = 1134
Score = 70.5 bits (171), Expect = 5e-10
Identities = 35/48 (72%), Positives = 38/48 (79%)
Frame = -2
Query: 513 GKSVAG*LETLLINQLPNRGFRLVNKADGKHRNFGTSNLTSGNLILQQ 370
GKS+A LETLL+NQLP RGFRLVNKADGKHRNFGTS L + L Q
Sbjct: 1087 GKSIASQLETLLVNQLPLRGFRLVNKADGKHRNFGTSRLPIEAITLHQ 1134
>ref|XP_008809666.1| PREDICTED: DNA mismatch repair protein MSH1, mitochondrial [Phoenix
dactylifera]
Length = 1138
Score = 69.3 bits (168), Expect = 1e-09
Identities = 35/48 (72%), Positives = 38/48 (79%)
Frame = -2
Query: 513 GKSVAG*LETLLINQLPNRGFRLVNKADGKHRNFGTSNLTSGNLILQQ 370
GKS+A LETLLIN+LP RGFRLVNKADGKHRNFGTS L + L Q
Sbjct: 1091 GKSIASQLETLLINELPLRGFRLVNKADGKHRNFGTSRLPKEPVKLHQ 1138
>gb|AIU48204.1| MSH1, partial [Trachycarpus fortunei]
Length = 848
Score = 68.2 bits (165), Expect = 2e-09
Identities = 33/37 (89%), Positives = 34/37 (91%)
Frame = -2
Query: 513 GKSVAG*LETLLINQLPNRGFRLVNKADGKHRNFGTS 403
GKS+A LETLLINQLP RGFRLVNKADGKHRNFGTS
Sbjct: 812 GKSIASQLETLLINQLPLRGFRLVNKADGKHRNFGTS 848
>ref|XP_010264855.1| PREDICTED: DNA mismatch repair protein MSH1, mitochondrial isoform X3
[Nelumbo nucifera]
Length = 1062
Score = 67.8 bits (164), Expect = 3e-09
Identities = 32/46 (69%), Positives = 40/46 (86%)
Frame = -2
Query: 513 GKSVAG*LETLLINQLPNRGFRLVNKADGKHRNFGTSNLTSGNLIL 376
GKS+A LETLLINQLP++GFRL N ADGKHRNFGTS+L+ +++L
Sbjct: 1017 GKSIASQLETLLINQLPHQGFRLTNIADGKHRNFGTSSLSLESVVL 1062
>ref|XP_010264854.1| PREDICTED: DNA mismatch repair protein MSH1, mitochondrial isoform X2
[Nelumbo nucifera]
Length = 1139
Score = 67.8 bits (164), Expect = 3e-09
Identities = 32/46 (69%), Positives = 40/46 (86%)
Frame = -2
Query: 513 GKSVAG*LETLLINQLPNRGFRLVNKADGKHRNFGTSNLTSGNLIL 376
GKS+A LETLLINQLP++GFRL N ADGKHRNFGTS+L+ +++L
Sbjct: 1094 GKSIASQLETLLINQLPHQGFRLTNIADGKHRNFGTSSLSLESVVL 1139
>ref|XP_010264853.1| PREDICTED: DNA mismatch repair protein MSH1, mitochondrial isoform X1
[Nelumbo nucifera]
Length = 1142
Score = 67.8 bits (164), Expect = 3e-09
Identities = 32/46 (69%), Positives = 40/46 (86%)
Frame = -2
Query: 513 GKSVAG*LETLLINQLPNRGFRLVNKADGKHRNFGTSNLTSGNLIL 376
GKS+A LETLLINQLP++GFRL N ADGKHRNFGTS+L+ +++L
Sbjct: 1097 GKSIASQLETLLINQLPHQGFRLTNIADGKHRNFGTSSLSLESVVL 1142
>ref|XP_002448138.1| hypothetical protein SORBIDRAFT_06g021950 [Sorghum bicolor]
gi|241939321|gb|EES12466.1| hypothetical protein
SORBIDRAFT_06g021950 [Sorghum bicolor]
Length = 1059
Score = 67.4 bits (163), Expect = 4e-09
Identities = 35/48 (72%), Positives = 39/48 (81%)
Frame = -2
Query: 513 GKSVAG*LETLLINQLPNRGFRLVNKADGKHRNFGTSNLTSGNLILQQ 370
GKSVA LETLLINQLP+RGF+L+NKADGKHRNFG S + SG I Q
Sbjct: 1011 GKSVACQLETLLINQLPSRGFKLINKADGKHRNFGISRI-SGEAIATQ 1057
>gb|AIU48188.1| MSH1, partial [Dioscorea oppositifolia]
Length = 949
Score = 67.0 bits (162), Expect = 5e-09
Identities = 33/37 (89%), Positives = 34/37 (91%)
Frame = -2
Query: 513 GKSVAG*LETLLINQLPNRGFRLVNKADGKHRNFGTS 403
GKSVA LETLLINQLP +GFRLVNKADGKHRNFGTS
Sbjct: 913 GKSVASQLETLLINQLPLQGFRLVNKADGKHRNFGTS 949
>ref|XP_011462423.1| PREDICTED: DNA mismatch repair protein MSH1, mitochondrial [Fragaria
vesca subsp. vesca]
Length = 1141
Score = 66.2 bits (160), Expect = 9e-09
Identities = 32/41 (78%), Positives = 36/41 (87%)
Frame = -2
Query: 513 GKSVAG*LETLLINQLPNRGFRLVNKADGKHRNFGTSNLTS 391
GKS+A LETLLINQLPN+GF L N ADGKHRNFGTSN++S
Sbjct: 1094 GKSLACQLETLLINQLPNQGFHLSNVADGKHRNFGTSNISS 1134
>gb|AIU48201.1| MSH1, partial [Houttuynia cordata]
Length = 796
Score = 66.2 bits (160), Expect = 9e-09
Identities = 31/39 (79%), Positives = 35/39 (89%)
Frame = -2
Query: 513 GKSVAG*LETLLINQLPNRGFRLVNKADGKHRNFGTSNL 397
GKSVA LETLLINQLP++GF+L NKADGKHRNFGTS +
Sbjct: 666 GKSVASELETLLINQLPSQGFQLANKADGKHRNFGTSKI 704
Score = 65.5 bits (158), Expect = 2e-08
Identities = 31/37 (83%), Positives = 34/37 (91%)
Frame = -2
Query: 513 GKSVAG*LETLLINQLPNRGFRLVNKADGKHRNFGTS 403
GKSVA LETLLINQLP++GF+L NKADGKHRNFGTS
Sbjct: 760 GKSVASELETLLINQLPSQGFQLANKADGKHRNFGTS 796
>gb|AIU48193.1| MSH1, partial [Fragaria vesca]
Length = 1398
Score = 66.2 bits (160), Expect = 9e-09
Identities = 32/41 (78%), Positives = 36/41 (87%)
Frame = -2
Query: 513 GKSVAG*LETLLINQLPNRGFRLVNKADGKHRNFGTSNLTS 391
GKS+A LETLLINQLPN+GF L N ADGKHRNFGTSN++S
Sbjct: 1351 GKSLACQLETLLINQLPNQGFHLSNVADGKHRNFGTSNISS 1391
>ref|XP_009341626.1| PREDICTED: DNA mismatch repair protein MSH1, mitochondrial [Pyrus x
bretschneideri]
Length = 1140
Score = 66.2 bits (160), Expect = 9e-09
Identities = 31/40 (77%), Positives = 36/40 (90%)
Frame = -2
Query: 513 GKSVAG*LETLLINQLPNRGFRLVNKADGKHRNFGTSNLT 394
GKS+A LETLLINQLPN+G+ L+N ADGKHRNFGTSNL+
Sbjct: 1093 GKSLACQLETLLINQLPNQGYHLINVADGKHRNFGTSNLS 1132
>gb|AFW58800.1| DNA mismatch repair protein [Zea mays]
Length = 1131
Score = 66.2 bits (160), Expect = 9e-09
Identities = 31/40 (77%), Positives = 36/40 (90%)
Frame = -2
Query: 513 GKSVAG*LETLLINQLPNRGFRLVNKADGKHRNFGTSNLT 394
GKSVA LETLLINQLP+RGF+L+NKADGKHRNFG S ++
Sbjct: 1083 GKSVACQLETLLINQLPSRGFKLINKADGKHRNFGISRIS 1122
>ref|NP_001105898.1| DNA mismatch repair protein [Zea mays] gi|61696671|gb|AAX53096.1| DNA
mismatch repair protein [Zea mays]
Length = 1131
Score = 66.2 bits (160), Expect = 9e-09
Identities = 31/40 (77%), Positives = 36/40 (90%)
Frame = -2
Query: 513 GKSVAG*LETLLINQLPNRGFRLVNKADGKHRNFGTSNLT 394
GKSVA LETLLINQLP+RGF+L+NKADGKHRNFG S ++
Sbjct: 1083 GKSVACQLETLLINQLPSRGFKLINKADGKHRNFGISRIS 1122
>ref|XP_010326799.1| PREDICTED: DNA mismatch repair protein MSH1, mitochondrial isoform X2
[Solanum lycopersicum] gi|723732684|ref|XP_010326800.1|
PREDICTED: DNA mismatch repair protein MSH1,
mitochondrial isoform X2 [Solanum lycopersicum]
Length = 1062
Score = 65.9 bits (159), Expect = 1e-08
Identities = 31/40 (77%), Positives = 35/40 (87%)
Frame = -2
Query: 513 GKSVAG*LETLLINQLPNRGFRLVNKADGKHRNFGTSNLT 394
GKS+A LETLLINQLPN GF+L N ADGKHRNFGT+NL+
Sbjct: 1015 GKSIACQLETLLINQLPNHGFQLTNVADGKHRNFGTTNLS 1054
>gb|AIU48178.1| MSH1, partial [Aristolochia tagala]
Length = 769
Score = 65.9 bits (159), Expect = 1e-08
Identities = 31/37 (83%), Positives = 34/37 (91%)
Frame = -2
Query: 513 GKSVAG*LETLLINQLPNRGFRLVNKADGKHRNFGTS 403
GKS+A LETLLINQLP+RG RLVNKADGKHRNFG+S
Sbjct: 733 GKSIASELETLLINQLPSRGLRLVNKADGKHRNFGSS 769