BLASTX nr result

ID: Cinnamomum24_contig00030448 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cinnamomum24_contig00030448
         (375 letters)

Database: ./nr 
           77,306,371 sequences; 28,104,191,420 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002275085.1| PREDICTED: pentatricopeptide repeat-containi...    62   2e-07
ref|XP_011465956.1| PREDICTED: pentatricopeptide repeat-containi...    61   4e-07
ref|XP_006471681.1| PREDICTED: pentatricopeptide repeat-containi...    60   6e-07
ref|XP_006432926.1| hypothetical protein CICLE_v10000494mg [Citr...    60   6e-07
ref|XP_008218268.1| PREDICTED: pentatricopeptide repeat-containi...    57   7e-06

>ref|XP_002275085.1| PREDICTED: pentatricopeptide repeat-containing protein At3g04750,
           mitochondrial [Vitis vinifera]
           gi|731416358|ref|XP_010659871.1| PREDICTED:
           pentatricopeptide repeat-containing protein At3g04750,
           mitochondrial [Vitis vinifera]
           gi|731416361|ref|XP_010659872.1| PREDICTED:
           pentatricopeptide repeat-containing protein At3g04750,
           mitochondrial [Vitis vinifera]
          Length = 654

 Score = 61.6 bits (148), Expect = 2e-07
 Identities = 27/42 (64%), Positives = 33/42 (78%)
 Frame = +2

Query: 2   KKAGRSSVVVDGVAHEFIAADKRHSRWLEISHMLKCLNGDMR 127
           K AG SSVVVDG+ HEF+AADKRH RW+EI  +L CL  +M+
Sbjct: 597 KTAGCSSVVVDGIIHEFVAADKRHPRWIEIQSILFCLKSEMK 638


>ref|XP_011465956.1| PREDICTED: pentatricopeptide repeat-containing protein At3g04750,
           mitochondrial [Fragaria vesca subsp. vesca]
           gi|764595948|ref|XP_011465957.1| PREDICTED:
           pentatricopeptide repeat-containing protein At3g04750,
           mitochondrial [Fragaria vesca subsp. vesca]
          Length = 670

 Score = 60.8 bits (146), Expect = 4e-07
 Identities = 27/42 (64%), Positives = 33/42 (78%)
 Frame = +2

Query: 2   KKAGRSSVVVDGVAHEFIAADKRHSRWLEISHMLKCLNGDMR 127
           K AG SSVVVDGV H+F+AADKRH RW +I H+L CL  +M+
Sbjct: 615 KTAGCSSVVVDGVIHDFVAADKRHPRWEDIFHILLCLKSEMK 656


>ref|XP_006471681.1| PREDICTED: pentatricopeptide repeat-containing protein At3g04750,
           mitochondrial-like [Citrus sinensis]
          Length = 655

 Score = 60.1 bits (144), Expect = 6e-07
 Identities = 27/42 (64%), Positives = 33/42 (78%)
 Frame = +2

Query: 2   KKAGRSSVVVDGVAHEFIAADKRHSRWLEISHMLKCLNGDMR 127
           K AGRSSVVVDG+ H+F+AADK+H RWL+I   L  LN +MR
Sbjct: 597 KTAGRSSVVVDGINHDFVAADKQHPRWLDIQSTLISLNSEMR 638


>ref|XP_006432926.1| hypothetical protein CICLE_v10000494mg [Citrus clementina]
           gi|557535048|gb|ESR46166.1| hypothetical protein
           CICLE_v10000494mg [Citrus clementina]
          Length = 681

 Score = 60.1 bits (144), Expect = 6e-07
 Identities = 27/42 (64%), Positives = 33/42 (78%)
 Frame = +2

Query: 2   KKAGRSSVVVDGVAHEFIAADKRHSRWLEISHMLKCLNGDMR 127
           K AGRSSVVVDG+ H+F+AADK+H RWL+I   L  LN +MR
Sbjct: 597 KTAGRSSVVVDGINHDFVAADKQHPRWLDIQSTLISLNSEMR 638


>ref|XP_008218268.1| PREDICTED: pentatricopeptide repeat-containing protein At3g04750,
           mitochondrial [Prunus mume]
          Length = 655

 Score = 56.6 bits (135), Expect = 7e-06
 Identities = 24/42 (57%), Positives = 32/42 (76%)
 Frame = +2

Query: 2   KKAGRSSVVVDGVAHEFIAADKRHSRWLEISHMLKCLNGDMR 127
           K AG SSV+VDGV H+F+ ADKRH RW++I  +L CL  +M+
Sbjct: 597 KTAGCSSVIVDGVIHDFVVADKRHPRWVDIFLVLHCLKSEMK 638


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