BLASTX nr result

ID: Cinnamomum24_contig00030269 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cinnamomum24_contig00030269
         (310 letters)

Database: ./nr 
           77,306,371 sequences; 28,104,191,420 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|KNA25232.1| hypothetical protein SOVF_008380 [Spinacia oleracea]    59   2e-06
ref|XP_010695302.1| PREDICTED: 50S ribosomal protein L12, cyanel...    57   4e-06

>gb|KNA25232.1| hypothetical protein SOVF_008380 [Spinacia oleracea]
          Length = 218

 Score = 58.5 bits (140), Expect = 2e-06
 Identities = 32/71 (45%), Positives = 35/71 (49%)
 Frame = -3

Query: 215 MSFLSRFRPHLSNGFCPKPLSTSPIPSKPLNLNWVFFNSTPTAKXXXXXXXXXEMIDQRK 36
           MS   + R H   GF PKP  +S I SKPLN  WV+   T                D RK
Sbjct: 1   MSLFLKLRQHFPTGFLPKPYISSLISSKPLNSTWVY--RTYAQPALQEQEFEEVEFDPRK 58

Query: 35  LPADYDPSNFD 3
           LPADYDPS FD
Sbjct: 59  LPADYDPSKFD 69


>ref|XP_010695302.1| PREDICTED: 50S ribosomal protein L12, cyanelle [Beta vulgaris
           subsp. vulgaris] gi|870844872|gb|KMS97734.1|
           hypothetical protein BVRB_5g124090 [Beta vulgaris subsp.
           vulgaris]
          Length = 217

 Score = 57.4 bits (137), Expect = 4e-06
 Identities = 33/71 (46%), Positives = 38/71 (53%)
 Frame = -3

Query: 215 MSFLSRFRPHLSNGFCPKPLSTSPIPSKPLNLNWVFFNSTPTAKXXXXXXXXXEMIDQRK 36
           MS + R R H   GF PKP  +S I SK LN N ++     +A            ID RK
Sbjct: 1   MSLILRLRQHFPTGFLPKPNLSSIITSKTLNPNLIYRTYAQSALQEEVEEVE---IDPRK 57

Query: 35  LPADYDPSNFD 3
           LPADYDPSNFD
Sbjct: 58  LPADYDPSNFD 68


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