BLASTX nr result

ID: Cinnamomum24_contig00030206 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cinnamomum24_contig00030206
         (453 letters)

Database: ./nr 
           77,306,371 sequences; 28,104,191,420 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_010940859.1| PREDICTED: pentatricopeptide repeat-containi...    61   3e-07
ref|XP_010267483.1| PREDICTED: pentatricopeptide repeat-containi...    58   3e-06
ref|XP_009412701.1| PREDICTED: pentatricopeptide repeat-containi...    57   4e-06
ref|XP_008803058.1| PREDICTED: LOW QUALITY PROTEIN: pentatricope...    57   4e-06

>ref|XP_010940859.1| PREDICTED: pentatricopeptide repeat-containing protein At5g08510
           [Elaeis guineensis]
          Length = 510

 Score = 61.2 bits (147), Expect = 3e-07
 Identities = 26/43 (60%), Positives = 37/43 (86%)
 Frame = -1

Query: 450 VHKFIVEDRSHPWSDEIFAVLDEITVMMKHFGYVPDIDLELEN 322
           +HKF+VED+SHP   EI+A+LDEIT +MK  GYVP++DL++E+
Sbjct: 468 MHKFLVEDKSHPRFKEIYALLDEITAIMKLLGYVPNLDLQVES 510


>ref|XP_010267483.1| PREDICTED: pentatricopeptide repeat-containing protein At5g08510
           [Nelumbo nucifera]
          Length = 509

 Score = 57.8 bits (138), Expect = 3e-06
 Identities = 26/44 (59%), Positives = 34/44 (77%)
 Frame = -1

Query: 450 VHKFIVEDRSHPWSDEIFAVLDEITVMMKHFGYVPDIDLELENH 319
           +HKFIVEDRSHP S EI+ +LDEI+  M+  G V ++D E+ENH
Sbjct: 465 MHKFIVEDRSHPRSTEIYVLLDEISSKMRLHGSVAELDAEIENH 508


>ref|XP_009412701.1| PREDICTED: pentatricopeptide repeat-containing protein At5g08510
           [Musa acuminata subsp. malaccensis]
           gi|695000625|ref|XP_009412709.1| PREDICTED:
           pentatricopeptide repeat-containing protein At5g08510
           [Musa acuminata subsp. malaccensis]
           gi|695000627|ref|XP_009412717.1| PREDICTED:
           pentatricopeptide repeat-containing protein At5g08510
           [Musa acuminata subsp. malaccensis]
          Length = 507

 Score = 57.4 bits (137), Expect = 4e-06
 Identities = 22/42 (52%), Positives = 35/42 (83%)
 Frame = -1

Query: 450 VHKFIVEDRSHPWSDEIFAVLDEITVMMKHFGYVPDIDLELE 325
           +HKF+VED+SHP  +EI+ +LDEIT+ M+H  Y P+++L++E
Sbjct: 465 MHKFLVEDKSHPQFEEIYVLLDEITMRMRHLSYKPNLNLQIE 506


>ref|XP_008803058.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
           protein At5g08510-like [Phoenix dactylifera]
          Length = 510

 Score = 57.4 bits (137), Expect = 4e-06
 Identities = 24/43 (55%), Positives = 35/43 (81%)
 Frame = -1

Query: 450 VHKFIVEDRSHPWSDEIFAVLDEITVMMKHFGYVPDIDLELEN 322
           +HKF+VED+ HP   EI+ +LDEIT +MK  GYVP++DL++E+
Sbjct: 468 MHKFLVEDKXHPRFKEIYKLLDEITAIMKLLGYVPNLDLQVES 510


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