BLASTX nr result
ID: Cinnamomum24_contig00030110
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Cinnamomum24_contig00030110
(280 letters)
Database: ./nr
77,306,371 sequences; 28,104,191,420 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_010651494.1| PREDICTED: protein CHROMATIN REMODELING 5 is... 83 9e-14
ref|XP_010651493.1| PREDICTED: protein CHROMATIN REMODELING 5 is... 83 9e-14
ref|XP_010651492.1| PREDICTED: protein CHROMATIN REMODELING 5 is... 83 9e-14
ref|XP_002275100.1| PREDICTED: protein CHROMATIN REMODELING 5 is... 83 9e-14
emb|CAN76895.1| hypothetical protein VITISV_009954 [Vitis vinifera] 83 9e-14
gb|KDO44944.1| hypothetical protein CISIN_1g0002412mg, partial [... 80 5e-13
ref|XP_006446246.1| hypothetical protein CICLE_v100140192mg, par... 80 5e-13
ref|XP_010273267.1| PREDICTED: protein CHROMATIN REMODELING 5 [N... 80 8e-13
ref|XP_010557504.1| PREDICTED: protein CHROMATIN REMODELING 5 is... 78 2e-12
ref|XP_010557503.1| PREDICTED: protein CHROMATIN REMODELING 5 is... 78 2e-12
ref|XP_006470732.1| PREDICTED: chromodomain-helicase-DNA-binding... 77 5e-12
ref|XP_007015201.1| Chromatin remodeling complex subunit isoform... 75 2e-11
ref|XP_007015200.1| Chromatin remodeling complex subunit isoform... 75 2e-11
ref|XP_011622955.1| PREDICTED: protein CHROMATIN REMODELING 5 [A... 74 4e-11
gb|ERN05059.1| hypothetical protein AMTR_s00053p00100210 [Ambore... 74 4e-11
ref|XP_009342615.1| PREDICTED: chromodomain-helicase-DNA-binding... 71 3e-10
ref|XP_009342612.1| PREDICTED: chromodomain-helicase-DNA-binding... 71 3e-10
ref|XP_009356095.1| PREDICTED: chromodomain-helicase-DNA-binding... 71 3e-10
ref|XP_008363421.1| PREDICTED: chromodomain-helicase-DNA-binding... 71 3e-10
ref|XP_010094255.1| Chromodomain-helicase-DNA-binding protein 1 ... 71 4e-10
>ref|XP_010651494.1| PREDICTED: protein CHROMATIN REMODELING 5 isoform X4 [Vitis
vinifera]
Length = 1761
Score = 82.8 bits (203), Expect = 9e-14
Identities = 44/95 (46%), Positives = 60/95 (63%), Gaps = 4/95 (4%)
Frame = +3
Query: 6 LMDVKSEGSGVGRVHSPVDANY---SLIDKDVV-KMDGQYQSDEEPTGDDDGRLQDGAVG 173
++D K +G + RVHS V Y + +KD K+DGQYQSD + +D LQ+ A
Sbjct: 16 VLDEKGQGQNIDRVHSSVANEYVDATSSEKDFESKVDGQYQSDGDT---NDAGLQNEAAA 72
Query: 174 SNNSGREMQNSQLSGRRTGLVGKWGSSFWKDCQPM 278
+++ G + N Q SGRRT + GKWGS+FWKDCQPM
Sbjct: 73 ADDIGLRISNLQPSGRRTAMAGKWGSTFWKDCQPM 107
>ref|XP_010651493.1| PREDICTED: protein CHROMATIN REMODELING 5 isoform X3 [Vitis
vinifera]
Length = 1762
Score = 82.8 bits (203), Expect = 9e-14
Identities = 44/95 (46%), Positives = 60/95 (63%), Gaps = 4/95 (4%)
Frame = +3
Query: 6 LMDVKSEGSGVGRVHSPVDANY---SLIDKDVV-KMDGQYQSDEEPTGDDDGRLQDGAVG 173
++D K +G + RVHS V Y + +KD K+DGQYQSD + +D LQ+ A
Sbjct: 16 VLDEKGQGQNIDRVHSSVANEYVDATSSEKDFESKVDGQYQSDGDT---NDAGLQNEAAA 72
Query: 174 SNNSGREMQNSQLSGRRTGLVGKWGSSFWKDCQPM 278
+++ G + N Q SGRRT + GKWGS+FWKDCQPM
Sbjct: 73 ADDIGLRISNLQPSGRRTAMAGKWGSTFWKDCQPM 107
>ref|XP_010651492.1| PREDICTED: protein CHROMATIN REMODELING 5 isoform X2 [Vitis
vinifera]
Length = 1763
Score = 82.8 bits (203), Expect = 9e-14
Identities = 44/95 (46%), Positives = 60/95 (63%), Gaps = 4/95 (4%)
Frame = +3
Query: 6 LMDVKSEGSGVGRVHSPVDANY---SLIDKDVV-KMDGQYQSDEEPTGDDDGRLQDGAVG 173
++D K +G + RVHS V Y + +KD K+DGQYQSD + +D LQ+ A
Sbjct: 16 VLDEKGQGQNIDRVHSSVANEYVDATSSEKDFESKVDGQYQSDGDT---NDAGLQNEAAA 72
Query: 174 SNNSGREMQNSQLSGRRTGLVGKWGSSFWKDCQPM 278
+++ G + N Q SGRRT + GKWGS+FWKDCQPM
Sbjct: 73 ADDIGLRISNLQPSGRRTAMAGKWGSTFWKDCQPM 107
>ref|XP_002275100.1| PREDICTED: protein CHROMATIN REMODELING 5 isoform X1 [Vitis
vinifera] gi|731393466|ref|XP_010651491.1| PREDICTED:
protein CHROMATIN REMODELING 5 isoform X1 [Vitis
vinifera]
Length = 1764
Score = 82.8 bits (203), Expect = 9e-14
Identities = 44/95 (46%), Positives = 60/95 (63%), Gaps = 4/95 (4%)
Frame = +3
Query: 6 LMDVKSEGSGVGRVHSPVDANY---SLIDKDVV-KMDGQYQSDEEPTGDDDGRLQDGAVG 173
++D K +G + RVHS V Y + +KD K+DGQYQSD + +D LQ+ A
Sbjct: 16 VLDEKGQGQNIDRVHSSVANEYVDATSSEKDFESKVDGQYQSDGDT---NDAGLQNEAAA 72
Query: 174 SNNSGREMQNSQLSGRRTGLVGKWGSSFWKDCQPM 278
+++ G + N Q SGRRT + GKWGS+FWKDCQPM
Sbjct: 73 ADDIGLRISNLQPSGRRTAMAGKWGSTFWKDCQPM 107
>emb|CAN76895.1| hypothetical protein VITISV_009954 [Vitis vinifera]
Length = 626
Score = 82.8 bits (203), Expect = 9e-14
Identities = 44/95 (46%), Positives = 60/95 (63%), Gaps = 4/95 (4%)
Frame = +3
Query: 6 LMDVKSEGSGVGRVHSPVDANY---SLIDKDVV-KMDGQYQSDEEPTGDDDGRLQDGAVG 173
++D K +G + RVHS V Y + +KD K+DGQYQSD + +D LQ+ A
Sbjct: 57 VLDEKGQGQNIDRVHSSVANEYVDATSSEKDFESKVDGQYQSDGDT---NDAGLQNEAAA 113
Query: 174 SNNSGREMQNSQLSGRRTGLVGKWGSSFWKDCQPM 278
+++ G + N Q SGRRT + GKWGS+FWKDCQPM
Sbjct: 114 ADDIGLRISNLQPSGRRTAMAGKWGSTFWKDCQPM 148
>gb|KDO44944.1| hypothetical protein CISIN_1g0002412mg, partial [Citrus sinensis]
Length = 571
Score = 80.5 bits (197), Expect = 5e-13
Identities = 45/95 (47%), Positives = 57/95 (60%), Gaps = 5/95 (5%)
Frame = +3
Query: 6 LMDVKSEGSGVGRVHS-----PVDANYSLIDKDVVKMDGQYQSDEEPTGDDDGRLQDGAV 170
+++ K++G VG + S VD Y D D+ MD QYQSD EP DD RLQ+ A
Sbjct: 16 ILEDKAQGQSVGGISSVGNEEDVDGTYGERDFDI-NMDVQYQSDGEP--DDANRLQNEAA 72
Query: 171 GSNNSGREMQNSQLSGRRTGLVGKWGSSFWKDCQP 275
++ G N Q SGRRT L G+WGS+FWKDCQP
Sbjct: 73 AVDHGGVRDLNMQPSGRRTALAGRWGSTFWKDCQP 107
>ref|XP_006446246.1| hypothetical protein CICLE_v100140192mg, partial [Citrus
clementina] gi|557548857|gb|ESR59486.1| hypothetical
protein CICLE_v100140192mg, partial [Citrus clementina]
Length = 572
Score = 80.5 bits (197), Expect = 5e-13
Identities = 45/95 (47%), Positives = 57/95 (60%), Gaps = 5/95 (5%)
Frame = +3
Query: 6 LMDVKSEGSGVGRVHS-----PVDANYSLIDKDVVKMDGQYQSDEEPTGDDDGRLQDGAV 170
+++ K++G VG + S VD Y D D+ MD QYQSD EP DD RLQ+ A
Sbjct: 16 ILEDKAQGQSVGGISSVGNEEDVDGTYGERDFDI-NMDVQYQSDGEP--DDANRLQNEAA 72
Query: 171 GSNNSGREMQNSQLSGRRTGLVGKWGSSFWKDCQP 275
++ G N Q SGRRT L G+WGS+FWKDCQP
Sbjct: 73 AVDHGGVRDLNMQPSGRRTALAGRWGSTFWKDCQP 107
>ref|XP_010273267.1| PREDICTED: protein CHROMATIN REMODELING 5 [Nelumbo nucifera]
gi|720055101|ref|XP_010273268.1| PREDICTED: protein
CHROMATIN REMODELING 5 [Nelumbo nucifera]
gi|720055104|ref|XP_010273269.1| PREDICTED: protein
CHROMATIN REMODELING 5 [Nelumbo nucifera]
Length = 1761
Score = 79.7 bits (195), Expect = 8e-13
Identities = 45/95 (47%), Positives = 58/95 (61%), Gaps = 4/95 (4%)
Frame = +3
Query: 6 LMDVKSEGSGVGRVHSPV---DANYSLIDKD-VVKMDGQYQSDEEPTGDDDGRLQDGAVG 173
++D K V RV++ V D + S +KD +KM+ YQS++EP DD R +D G
Sbjct: 16 VLDDKGHDHSVERVNNSVGDEDLDASSSEKDGELKMEEHYQSEDEP--DDTNRPRDDRSG 73
Query: 174 SNNSGREMQNSQLSGRRTGLVGKWGSSFWKDCQPM 278
N + QN Q SGRR +VGKWGSSFWKDCQPM
Sbjct: 74 ENGIAGQKQNFQPSGRRNAVVGKWGSSFWKDCQPM 108
>ref|XP_010557504.1| PREDICTED: protein CHROMATIN REMODELING 5 isoform X2 [Tarenaya
hassleriana]
Length = 1745
Score = 78.2 bits (191), Expect = 2e-12
Identities = 43/78 (55%), Positives = 49/78 (62%)
Frame = +3
Query: 45 VHSPVDANYSLIDKDVVKMDGQYQSDEEPTGDDDGRLQDGAVGSNNSGREMQNSQLSGRR 224
V+ VD YS D+ MD QYQSD EP D RLQ+GA N G + Q SGRR
Sbjct: 34 VNEDVDGTYSDRGFDI-NMDVQYQSDAEPECSD--RLQNGATSDNVVGYADPSFQASGRR 90
Query: 225 TGLVGKWGSSFWKDCQPM 278
TG+ GKWGS+FWKDCQPM
Sbjct: 91 TGVSGKWGSTFWKDCQPM 108
>ref|XP_010557503.1| PREDICTED: protein CHROMATIN REMODELING 5 isoform X1 [Tarenaya
hassleriana]
Length = 1746
Score = 78.2 bits (191), Expect = 2e-12
Identities = 43/78 (55%), Positives = 49/78 (62%)
Frame = +3
Query: 45 VHSPVDANYSLIDKDVVKMDGQYQSDEEPTGDDDGRLQDGAVGSNNSGREMQNSQLSGRR 224
V+ VD YS D+ MD QYQSD EP D RLQ+GA N G + Q SGRR
Sbjct: 34 VNEDVDGTYSDRGFDI-NMDVQYQSDAEPECSD--RLQNGATSDNVVGYADPSFQASGRR 90
Query: 225 TGLVGKWGSSFWKDCQPM 278
TG+ GKWGS+FWKDCQPM
Sbjct: 91 TGVSGKWGSTFWKDCQPM 108
>ref|XP_006470732.1| PREDICTED: chromodomain-helicase-DNA-binding protein 1-like isoform
X1 [Citrus sinensis] gi|568833055|ref|XP_006470733.1|
PREDICTED: chromodomain-helicase-DNA-binding protein
1-like isoform X2 [Citrus sinensis]
Length = 1777
Score = 77.0 bits (188), Expect = 5e-12
Identities = 44/95 (46%), Positives = 56/95 (58%), Gaps = 5/95 (5%)
Frame = +3
Query: 6 LMDVKSEGSGVGRVHS-----PVDANYSLIDKDVVKMDGQYQSDEEPTGDDDGRLQDGAV 170
+++ K++G VG + S VD Y D D+ MD QYQSD E DD RLQ+ A
Sbjct: 16 ILEDKAQGQSVGGISSVGNEEDVDGTYGERDFDI-NMDVQYQSDGEL--DDANRLQNEAA 72
Query: 171 GSNNSGREMQNSQLSGRRTGLVGKWGSSFWKDCQP 275
++ G N Q SGRRT L G+WGS+FWKDCQP
Sbjct: 73 AVDHGGMRDLNLQPSGRRTALAGRWGSTFWKDCQP 107
>ref|XP_007015201.1| Chromatin remodeling complex subunit isoform 2 [Theobroma cacao]
gi|508785564|gb|EOY32820.1| Chromatin remodeling complex
subunit isoform 2 [Theobroma cacao]
Length = 1810
Score = 75.1 bits (183), Expect = 2e-11
Identities = 42/94 (44%), Positives = 56/94 (59%), Gaps = 3/94 (3%)
Frame = +3
Query: 6 LMDVKSEGSGVGRVHSPV---DANYSLIDKDVVKMDGQYQSDEEPTGDDDGRLQDGAVGS 176
+++ KS+G +GR+HS V D + + + + MD QYQSD EP DD RL +
Sbjct: 16 VLEEKSQGQNIGRIHSTVGNEDVDGTYEREFDINMDAQYQSDGEP--DDAVRLHNEVPAD 73
Query: 177 NNSGREMQNSQLSGRRTGLVGKWGSSFWKDCQPM 278
N +G N Q +GRR GKWGS+FWKDCQPM
Sbjct: 74 NVAGVSNSNFQPAGRRIA-PGKWGSTFWKDCQPM 106
>ref|XP_007015200.1| Chromatin remodeling complex subunit isoform 1 [Theobroma cacao]
gi|590584532|ref|XP_007015202.1| Chromatin remodeling
complex subunit isoform 1 [Theobroma cacao]
gi|508785563|gb|EOY32819.1| Chromatin remodeling complex
subunit isoform 1 [Theobroma cacao]
gi|508785565|gb|EOY32821.1| Chromatin remodeling complex
subunit isoform 1 [Theobroma cacao]
Length = 1768
Score = 75.1 bits (183), Expect = 2e-11
Identities = 42/94 (44%), Positives = 56/94 (59%), Gaps = 3/94 (3%)
Frame = +3
Query: 6 LMDVKSEGSGVGRVHSPV---DANYSLIDKDVVKMDGQYQSDEEPTGDDDGRLQDGAVGS 176
+++ KS+G +GR+HS V D + + + + MD QYQSD EP DD RL +
Sbjct: 16 VLEEKSQGQNIGRIHSTVGNEDVDGTYEREFDINMDAQYQSDGEP--DDAVRLHNEVPAD 73
Query: 177 NNSGREMQNSQLSGRRTGLVGKWGSSFWKDCQPM 278
N +G N Q +GRR GKWGS+FWKDCQPM
Sbjct: 74 NVAGVSNSNFQPAGRRIA-PGKWGSTFWKDCQPM 106
>ref|XP_011622955.1| PREDICTED: protein CHROMATIN REMODELING 5 [Amborella trichopoda]
Length = 1804
Score = 73.9 bits (180), Expect = 4e-11
Identities = 40/65 (61%), Positives = 46/65 (70%), Gaps = 1/65 (1%)
Frame = +3
Query: 81 DKDVV-KMDGQYQSDEEPTGDDDGRLQDGAVGSNNSGREMQNSQLSGRRTGLVGKWGSSF 257
DKDVV K D +YQS+EE GDDD D +G+N G+ QN Q GRR+ LVGKWGSSF
Sbjct: 47 DKDVVGKADDRYQSEEE-VGDDDHVQVD--LGNNTIGKRSQNFQQPGRRSALVGKWGSSF 103
Query: 258 WKDCQ 272
WKDCQ
Sbjct: 104 WKDCQ 108
>gb|ERN05059.1| hypothetical protein AMTR_s00053p00100210 [Amborella trichopoda]
Length = 193
Score = 73.9 bits (180), Expect = 4e-11
Identities = 40/65 (61%), Positives = 46/65 (70%), Gaps = 1/65 (1%)
Frame = +3
Query: 81 DKDVV-KMDGQYQSDEEPTGDDDGRLQDGAVGSNNSGREMQNSQLSGRRTGLVGKWGSSF 257
DKDVV K D +YQS+EE GDDD D +G+N G+ QN Q GRR+ LVGKWGSSF
Sbjct: 47 DKDVVGKADDRYQSEEE-VGDDDHVQVD--LGNNTIGKRSQNFQQPGRRSALVGKWGSSF 103
Query: 258 WKDCQ 272
WKDCQ
Sbjct: 104 WKDCQ 108
>ref|XP_009342615.1| PREDICTED: chromodomain-helicase-DNA-binding protein 1-like isoform
X2 [Pyrus x bretschneideri]
Length = 1740
Score = 71.2 bits (173), Expect = 3e-10
Identities = 39/95 (41%), Positives = 56/95 (58%), Gaps = 4/95 (4%)
Frame = +3
Query: 6 LMDVKSEGSGVGRVHSPV---DANYSLIDKDV-VKMDGQYQSDEEPTGDDDGRLQDGAVG 173
+++ K+ G V R+HS D + + +K+ + MD QYQS+ E +D RL + A
Sbjct: 16 VLEEKTLGQSVERIHSSTGNEDMDVNSYEKECDINMDVQYQSEGEH--EDASRLHNEAAE 73
Query: 174 SNNSGREMQNSQLSGRRTGLVGKWGSSFWKDCQPM 278
G ++ N SGRRT + GKWGS+FWKDCQPM
Sbjct: 74 DEVIGTKVSNLPTSGRRTAVAGKWGSTFWKDCQPM 108
>ref|XP_009342612.1| PREDICTED: chromodomain-helicase-DNA-binding protein 1-like isoform
X1 [Pyrus x bretschneideri]
gi|694430246|ref|XP_009342613.1| PREDICTED:
chromodomain-helicase-DNA-binding protein 1-like isoform
X1 [Pyrus x bretschneideri]
gi|694430248|ref|XP_009342614.1| PREDICTED:
chromodomain-helicase-DNA-binding protein 1-like isoform
X1 [Pyrus x bretschneideri]
Length = 1741
Score = 71.2 bits (173), Expect = 3e-10
Identities = 39/95 (41%), Positives = 56/95 (58%), Gaps = 4/95 (4%)
Frame = +3
Query: 6 LMDVKSEGSGVGRVHSPV---DANYSLIDKDV-VKMDGQYQSDEEPTGDDDGRLQDGAVG 173
+++ K+ G V R+HS D + + +K+ + MD QYQS+ E +D RL + A
Sbjct: 16 VLEEKTLGQSVERIHSSTGNEDMDVNSYEKECDINMDVQYQSEGEH--EDASRLHNEAAE 73
Query: 174 SNNSGREMQNSQLSGRRTGLVGKWGSSFWKDCQPM 278
G ++ N SGRRT + GKWGS+FWKDCQPM
Sbjct: 74 DEVIGTKVSNLPTSGRRTAVAGKWGSTFWKDCQPM 108
>ref|XP_009356095.1| PREDICTED: chromodomain-helicase-DNA-binding protein 1-like,
partial [Pyrus x bretschneideri]
Length = 564
Score = 71.2 bits (173), Expect = 3e-10
Identities = 38/95 (40%), Positives = 54/95 (56%), Gaps = 4/95 (4%)
Frame = +3
Query: 6 LMDVKSEGSGVGRVHSPV---DANYSLIDKDV-VKMDGQYQSDEEPTGDDDGRLQDGAVG 173
+++ K++G V R+HS D + +K+ + MD QYQS+ E D+ RL +
Sbjct: 16 VLEEKTQGKSVERIHSSTGNDDVDVKSCEKEFDINMDVQYQSEGEH--DNATRLHNEVAA 73
Query: 174 SNNSGREMQNSQLSGRRTGLVGKWGSSFWKDCQPM 278
G + N SGRRT + GKWGS+FWKDCQPM
Sbjct: 74 DEGMGTRVSNLPSSGRRTTVAGKWGSTFWKDCQPM 108
>ref|XP_008363421.1| PREDICTED: chromodomain-helicase-DNA-binding protein 1-like [Malus
domestica]
Length = 792
Score = 71.2 bits (173), Expect = 3e-10
Identities = 39/95 (41%), Positives = 55/95 (57%), Gaps = 4/95 (4%)
Frame = +3
Query: 6 LMDVKSEGSGVGRVHSPV---DANYSLIDKDV-VKMDGQYQSDEEPTGDDDGRLQDGAVG 173
+++ K+ G V R+HS D + + +K+ + MD QYQS+ E +D RL + A
Sbjct: 16 VLEEKTLGQSVERIHSSTGNEDVDVNSYEKEFDINMDVQYQSEGEH--EDASRLHNEAAE 73
Query: 174 SNNSGREMQNSQLSGRRTGLVGKWGSSFWKDCQPM 278
G + N SGRRT + GKWGS+FWKDCQPM
Sbjct: 74 DEVIGTKFSNLPTSGRRTAVAGKWGSTFWKDCQPM 108
>ref|XP_010094255.1| Chromodomain-helicase-DNA-binding protein 1 [Morus notabilis]
gi|587866002|gb|EXB55506.1|
Chromodomain-helicase-DNA-binding protein 1 [Morus
notabilis]
Length = 1754
Score = 70.9 bits (172), Expect = 4e-10
Identities = 36/62 (58%), Positives = 43/62 (69%)
Frame = +3
Query: 93 VKMDGQYQSDEEPTGDDDGRLQDGAVGSNNSGREMQNSQLSGRRTGLVGKWGSSFWKDCQ 272
+ MD Q QS+ EP DD RLQ+ A N+ GR + N Q SGRRT + GKWGS+FWKDCQ
Sbjct: 1 MNMDAQEQSEGEP--DDASRLQNEAT-VNDDGRTVGNLQPSGRRTAMAGKWGSTFWKDCQ 57
Query: 273 PM 278
PM
Sbjct: 58 PM 59