BLASTX nr result

ID: Cinnamomum24_contig00029730 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cinnamomum24_contig00029730
         (244 letters)

Database: ./nr 
           77,306,371 sequences; 28,104,191,420 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AFW86827.1| hypothetical protein ZEAMMB73_415054 [Zea mays]         70   7e-18
emb|CAA65519.1| unnamed protein product [Nicotiana sylvestris]         88   3e-15
emb|CDY45488.1| BnaCnng12470D [Brassica napus] gi|674896161|emb|...    53   2e-09
ref|XP_009385754.1| PREDICTED: NADH-ubiquinone oxidoreductase ch...    62   2e-07

>gb|AFW86827.1| hypothetical protein ZEAMMB73_415054 [Zea mays]
          Length = 161

 Score = 69.7 bits (169), Expect(2) = 7e-18
 Identities = 31/33 (93%), Positives = 31/33 (93%)
 Frame = -3

Query: 125 KWVCAAGVERSTLHRCGLTGLGLINPFFHSSIG 27
           KWVCAAGVERSTLHRCGLTGLGLINP FHSS G
Sbjct: 116 KWVCAAGVERSTLHRCGLTGLGLINPLFHSSRG 148



 Score = 47.4 bits (111), Expect(2) = 7e-18
 Identities = 27/40 (67%), Positives = 27/40 (67%)
 Frame = -2

Query: 243 LLYLFAISSLGVYGIITAXXXXXXXXXXSVAYDTRTNGSK 124
           LLYLFAISSLGVYGII A          SVAYD RTN SK
Sbjct: 77  LLYLFAISSLGVYGIIIAGWSSKTGGGRSVAYDIRTNWSK 116


>emb|CAA65519.1| unnamed protein product [Nicotiana sylvestris]
          Length = 42

 Score = 87.8 bits (216), Expect = 3e-15
 Identities = 39/42 (92%), Positives = 40/42 (95%)
 Frame = -3

Query: 149 MILGPMGQKWVCAAGVERSTLHRCGLTGLGLINPFFHSSIGP 24
           MILGP+G KWVCAAGVERSTLHRCGLTGLGLINPFFH SIGP
Sbjct: 1   MILGPIGSKWVCAAGVERSTLHRCGLTGLGLINPFFHLSIGP 42


>emb|CDY45488.1| BnaCnng12470D [Brassica napus] gi|674896161|emb|CDY36712.1|
           BnaC02g31330D [Brassica napus]
          Length = 159

 Score = 53.1 bits (126), Expect(2) = 2e-09
 Identities = 24/28 (85%), Positives = 25/28 (89%)
 Frame = -3

Query: 110 AGVERSTLHRCGLTGLGLINPFFHSSIG 27
           + VERSTLHRCGLTGLGL NPFFHSS G
Sbjct: 97  SSVERSTLHRCGLTGLGLRNPFFHSSRG 124



 Score = 35.0 bits (79), Expect(2) = 2e-09
 Identities = 17/18 (94%), Positives = 17/18 (94%)
 Frame = -2

Query: 243 LLYLFAISSLGVYGIITA 190
           LLYLFAISSLGVYGII A
Sbjct: 77  LLYLFAISSLGVYGIIIA 94


>ref|XP_009385754.1| PREDICTED: NADH-ubiquinone oxidoreductase chain 1 [Musa acuminata
           subsp. malaccensis]
          Length = 123

 Score = 62.0 bits (149), Expect = 2e-07
 Identities = 33/47 (70%), Positives = 33/47 (70%)
 Frame = -2

Query: 243 LLYLFAISSLGVYGIITAXXXXXXXXXXSVAYDTRTNGSKMGLCRRC 103
           LLYLFAISSLGVYGII A          SVAYD RTN S MGLCRRC
Sbjct: 77  LLYLFAISSLGVYGIIIAGWSSNIGSGRSVAYDRRTNWSNMGLCRRC 123


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