BLASTX nr result

ID: Cinnamomum24_contig00029588 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cinnamomum24_contig00029588
         (361 letters)

Database: ./nr 
           77,306,371 sequences; 28,104,191,420 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_008799534.1| PREDICTED: pentatricopeptide repeat-containi...   163   4e-38
ref|XP_010919253.1| PREDICTED: pentatricopeptide repeat-containi...   162   7e-38
ref|XP_010264719.1| PREDICTED: pentatricopeptide repeat-containi...   162   7e-38
ref|XP_010653713.1| PREDICTED: pentatricopeptide repeat-containi...   159   8e-37
emb|CAN67654.1| hypothetical protein VITISV_038410 [Vitis vinifera]   159   8e-37
ref|XP_011628757.1| PREDICTED: pentatricopeptide repeat-containi...   154   3e-35
ref|XP_011094741.1| PREDICTED: pentatricopeptide repeat-containi...   147   2e-33
ref|XP_009771913.1| PREDICTED: pentatricopeptide repeat-containi...   147   3e-33
ref|XP_012858083.1| PREDICTED: pentatricopeptide repeat-containi...   146   5e-33
gb|ACD56648.1| putative pentatricopeptide repeat protein [Gossyp...   146   5e-33
gb|EYU19813.1| hypothetical protein MIMGU_mgv1a024453mg, partial...   146   5e-33
gb|AAT64016.1| putative pentatricopeptide repeat protein [Gossyp...   146   7e-33
ref|XP_012440013.1| PREDICTED: pentatricopeptide repeat-containi...   145   9e-33
ref|XP_009624280.1| PREDICTED: pentatricopeptide repeat-containi...   145   9e-33
ref|XP_011620442.1| PREDICTED: pentatricopeptide repeat-containi...   145   1e-32
gb|ACD56662.1| putative pentatricopeptide [Gossypium arboreum]        145   2e-32
ref|XP_012456795.1| PREDICTED: pentatricopeptide repeat-containi...   144   2e-32
gb|ACD56635.1| putative pentatricopeptide repeat protein [Gossyp...   144   2e-32
gb|AHB18405.1| pentatricopeptide repeat-containing protein [Goss...   144   2e-32
gb|AAT64030.1| putative pentatricopeptide repeat protein [Gossyp...   144   2e-32

>ref|XP_008799534.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g02750-like [Phoenix dactylifera]
           gi|672159542|ref|XP_008799536.1| PREDICTED:
           pentatricopeptide repeat-containing protein
           At4g02750-like [Phoenix dactylifera]
           gi|672159544|ref|XP_008799537.1| PREDICTED:
           pentatricopeptide repeat-containing protein
           At4g02750-like [Phoenix dactylifera]
          Length = 502

 Score =  163 bits (413), Expect = 4e-38
 Identities = 75/120 (62%), Positives = 94/120 (78%)
 Frame = -1

Query: 361 FTSMPHLDMVTWNSMVTGYGQHGSGAEAIIVFNQMEEAGFQPDEISFLGVLQGCSHSGLV 182
           F S+   DM TWN+M++GYGQHG   EAI+VF+QM++AGF PD ISFLGVLQGCSH G +
Sbjct: 280 FNSIYQPDMFTWNAMISGYGQHGYAVEAILVFHQMQKAGFHPDRISFLGVLQGCSHRGFL 339

Query: 181 EQGWRYFTSMVKDYGISPKIEHYSCLVDLLARSGLLREAAEIIDRMPFNPVAIFWRTLLN 2
           ++G  YF  M KD+G+    EHY C+VD+LAR+GLL+EAA II +MPF P +IFWRTLLN
Sbjct: 340 KEGILYFDCMQKDFGVHRGPEHYVCMVDILARAGLLKEAAMIILKMPFEPTSIFWRTLLN 399


>ref|XP_010919253.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g02750-like isoform X1 [Elaeis guineensis]
          Length = 503

 Score =  162 bits (411), Expect = 7e-38
 Identities = 74/120 (61%), Positives = 94/120 (78%)
 Frame = -1

Query: 361 FTSMPHLDMVTWNSMVTGYGQHGSGAEAIIVFNQMEEAGFQPDEISFLGVLQGCSHSGLV 182
           F S+   DM TWN+M++GYGQHG   EAI+VF+QM++AGF PD ISFLGVLQGCSH G V
Sbjct: 280 FNSIHQPDMFTWNAMISGYGQHGYAIEAILVFHQMQKAGFHPDRISFLGVLQGCSHCGFV 339

Query: 181 EQGWRYFTSMVKDYGISPKIEHYSCLVDLLARSGLLREAAEIIDRMPFNPVAIFWRTLLN 2
           ++G  YF  M KD+G+    EHY C+VD++AR+GLL+EAA II ++PF P +IFWRTLLN
Sbjct: 340 KEGILYFDRMQKDFGVHRGPEHYVCMVDIVARAGLLKEAAMIIFKLPFEPTSIFWRTLLN 399


>ref|XP_010264719.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g02750-like [Nelumbo nucifera]
          Length = 499

 Score =  162 bits (411), Expect = 7e-38
 Identities = 73/120 (60%), Positives = 94/120 (78%)
 Frame = -1

Query: 361 FTSMPHLDMVTWNSMVTGYGQHGSGAEAIIVFNQMEEAGFQPDEISFLGVLQGCSHSGLV 182
           F  +P  D +TWNSM++GY QHG G EAI+ F+QM++A   PD +SFLGVLQGCSH G V
Sbjct: 269 FVVIPRPDTITWNSMLSGYAQHGYGLEAIMTFHQMQKAHIFPDGVSFLGVLQGCSHCGFV 328

Query: 181 EQGWRYFTSMVKDYGISPKIEHYSCLVDLLARSGLLREAAEIIDRMPFNPVAIFWRTLLN 2
           E+ W YF SM  D+GI P  EHY+C+VD+LAR+GL++EA ++I +MPF PVAIFW+TLLN
Sbjct: 329 EEAWLYFDSMEIDHGIPPLPEHYACMVDVLARAGLIKEALDMILKMPFEPVAIFWKTLLN 388



 Score = 58.2 bits (139), Expect = 2e-06
 Identities = 31/120 (25%), Positives = 60/120 (50%)
 Frame = -1

Query: 361 FTSMPHLDMVTWNSMVTGYGQHGSGAEAIIVFNQMEEAGFQPDEISFLGVLQGCSHSGLV 182
           F  MP  + ++W+S+++G+ Q+G  AE +I+F +M  AG  P   SF   L   +    +
Sbjct: 168 FKQMPEPNSISWSSVISGFQQNGLAAETLILFKEMLSAGIHPTPHSFTSALTATADLAAL 227

Query: 181 EQGWRYFTSMVKDYGISPKIEHYSCLVDLLARSGLLREAAEIIDRMPFNPVAIFWRTLLN 2
             G + ++ ++K  G    I   +  + +  +SG   +A  +   +P  P  I W ++L+
Sbjct: 228 SIGQQLYSQLIK-RGFEINIHVGNSAISMFIKSGSFYDARHVFVVIP-RPDTITWNSMLS 285


>ref|XP_010653713.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g02750-like [Vitis vinifera]
          Length = 492

 Score =  159 bits (402), Expect = 8e-37
 Identities = 72/117 (61%), Positives = 92/117 (78%)
 Frame = -1

Query: 352 MPHLDMVTWNSMVTGYGQHGSGAEAIIVFNQMEEAGFQPDEISFLGVLQGCSHSGLVEQG 173
           +P  D+VTWN+MV GYGQ+G G EAI+ F+QM++A F PD +SFLG+L GCSH G VE+G
Sbjct: 268 LPQPDIVTWNAMVVGYGQNGYGIEAIMSFHQMQKAKFLPDRVSFLGLLHGCSHCGYVEKG 327

Query: 172 WRYFTSMVKDYGISPKIEHYSCLVDLLARSGLLREAAEIIDRMPFNPVAIFWRTLLN 2
            +YF SM  +YGISP  EHY+C+VDLL+R+G L+EA ++I  MPF P  IFWRTLLN
Sbjct: 328 KQYFRSMESNYGISPGPEHYACMVDLLSRAGFLKEAHKLIKEMPFEPTCIFWRTLLN 384


>emb|CAN67654.1| hypothetical protein VITISV_038410 [Vitis vinifera]
          Length = 492

 Score =  159 bits (402), Expect = 8e-37
 Identities = 72/117 (61%), Positives = 92/117 (78%)
 Frame = -1

Query: 352 MPHLDMVTWNSMVTGYGQHGSGAEAIIVFNQMEEAGFQPDEISFLGVLQGCSHSGLVEQG 173
           +P  D+VTWN+MV GYGQ+G G EAI+ F+QM++A F PD +SFLG+L GCSH G VE+G
Sbjct: 268 LPQPDIVTWNAMVVGYGQNGYGIEAIMSFHQMQKAKFLPDRVSFLGLLHGCSHCGYVEKG 327

Query: 172 WRYFTSMVKDYGISPKIEHYSCLVDLLARSGLLREAAEIIDRMPFNPVAIFWRTLLN 2
            +YF SM  +YGISP  EHY+C+VDLL+R+G L+EA ++I  MPF P  IFWRTLLN
Sbjct: 328 KQYFRSMESNYGISPGPEHYACMVDLLSRAGFLKEAHKLIKEMPFEPTCIFWRTLLN 384


>ref|XP_011628757.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g08070-like [Amborella trichopoda]
          Length = 516

 Score =  154 bits (388), Expect = 3e-35
 Identities = 69/120 (57%), Positives = 87/120 (72%)
 Frame = -1

Query: 361 FTSMPHLDMVTWNSMVTGYGQHGSGAEAIIVFNQMEEAGFQPDEISFLGVLQGCSHSGLV 182
           F  MP  ++ TWN+M++GY  HG   EAI+VF  M +A  +PD I+F+ VL  C+H+GLV
Sbjct: 283 FNKMPEKNLTTWNAMMSGYSMHGHAREAIVVFMAMIDASIEPDSITFVAVLSACAHAGLV 342

Query: 181 EQGWRYFTSMVKDYGISPKIEHYSCLVDLLARSGLLREAAEIIDRMPFNPVAIFWRTLLN 2
           E G+R+F SMVKDYGI PKIEHY C+VDLL RSG L+EA   I+RMPF P  I W +LLN
Sbjct: 343 EDGFRFFDSMVKDYGIKPKIEHYGCIVDLLGRSGRLKEAMIFIERMPFQPNIIIWGSLLN 402



 Score = 56.6 bits (135), Expect = 7e-06
 Identities = 33/122 (27%), Positives = 64/122 (52%), Gaps = 2/122 (1%)
 Frame = -1

Query: 361 FTSMPHLDMVTWNSMVTGYGQHGSGAEAIIVFNQMEEAGFQPDEISFLGVLQGCSHSGLV 182
           F      D+V WNSM++GY + G   +A+ +   +E    +P+E++ + ++  C+ S  +
Sbjct: 80  FDEFTDKDLVFWNSMISGYVKCGRYLDALNLLKDLESRCVRPNEVTIIHLISACTLSRDL 139

Query: 181 EQGWRYFTSMVKDYGI--SPKIEHYSCLVDLLARSGLLREAAEIIDRMPFNPVAIFWRTL 8
           E G RY  +   + G   +  ++  S L+D+ A+ G L  + E+  RMP     I W ++
Sbjct: 140 EMG-RYIHNYAVNSGCINTMSMKLGSSLIDMYAKCGCLESSRELFHRMP-QRNTIVWNSM 197

Query: 7   LN 2
           ++
Sbjct: 198 IS 199


>ref|XP_011094741.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g02750-like [Sesamum indicum]
          Length = 425

 Score =  147 bits (372), Expect = 2e-33
 Identities = 68/120 (56%), Positives = 87/120 (72%)
 Frame = -1

Query: 361 FTSMPHLDMVTWNSMVTGYGQHGSGAEAIIVFNQMEEAGFQPDEISFLGVLQGCSHSGLV 182
           F  +   D VTWN+M+ G+ QHG G EA+++F+QM++A   PD IS++GVL GCSH G V
Sbjct: 192 FLDLDKPDRVTWNAMIVGFAQHGYGLEAMMIFHQMQKAQVLPDGISYMGVLHGCSHCGFV 251

Query: 181 EQGWRYFTSMVKDYGISPKIEHYSCLVDLLARSGLLREAAEIIDRMPFNPVAIFWRTLLN 2
           ++G  YF SM  DYGISP  EH+S +VDL AR+G L+EA EII  +PF P  IFWRTLLN
Sbjct: 252 QEGREYFQSMKMDYGISPGPEHFSAMVDLYARAGKLKEAYEIILELPFKPTTIFWRTLLN 311


>ref|XP_009771913.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g62890-like [Nicotiana sylvestris]
          Length = 602

 Score =  147 bits (371), Expect = 3e-33
 Identities = 64/119 (53%), Positives = 88/119 (73%)
 Frame = -1

Query: 361 FTSMPHLDMVTWNSMVTGYGQHGSGAEAIIVFNQMEEAGFQPDEISFLGVLQGCSHSGLV 182
           F SM   ++V+W S++ G   HG GAEA+ +F +M++ G  PD++SF+G+L  CSHSGLV
Sbjct: 288 FRSMSQRNIVSWTSVIDGMAMHGRGAEAVSLFEEMKKDGVVPDDVSFIGLLTACSHSGLV 347

Query: 181 EQGWRYFTSMVKDYGISPKIEHYSCLVDLLARSGLLREAAEIIDRMPFNPVAIFWRTLL 5
           EQG  YF SM K++GISPKIEHY C+VDLL R+GL++EA + + RMP  P  + WRTL+
Sbjct: 348 EQGKGYFYSMTKEFGISPKIEHYGCMVDLLCRAGLVQEALDFVQRMPIKPNPVIWRTLI 406



 Score = 59.3 bits (142), Expect = 1e-06
 Identities = 30/120 (25%), Positives = 65/120 (54%)
 Frame = -1

Query: 361 FTSMPHLDMVTWNSMVTGYGQHGSGAEAIIVFNQMEEAGFQPDEISFLGVLQGCSHSGLV 182
           F  MP  + V W++M+ GY + G  +EA+ +F +M+ A   PDE++ + +L  C+  G +
Sbjct: 187 FDEMPKWNSVGWSAMIGGYVRWGLSSEAVELFREMQVARVAPDEVTMVCLLSACTDLGAL 246

Query: 181 EQGWRYFTSMVKDYGISPKIEHYSCLVDLLARSGLLREAAEIIDRMPFNPVAIFWRTLLN 2
           E G ++  + +K   +      ++ L+D+ A+ G + +A  +   M    + + W ++++
Sbjct: 247 ELG-KWLEAYIKRENVPKSAVLWNALIDMFAKCGDVDKALSLFRSMSQRNI-VSWTSVID 304


>ref|XP_012858083.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g02750-like [Erythranthe guttatus]
          Length = 457

 Score =  146 bits (369), Expect = 5e-33
 Identities = 65/120 (54%), Positives = 87/120 (72%)
 Frame = -1

Query: 361 FTSMPHLDMVTWNSMVTGYGQHGSGAEAIIVFNQMEEAGFQPDEISFLGVLQGCSHSGLV 182
           F+ M   D VTWNSM+ G+ QHG G EA ++F+QM++A F PD IS++GVL GCSH G +
Sbjct: 223 FSEMDKPDRVTWNSMIMGFSQHGYGLEATMLFHQMQKARFLPDSISYVGVLHGCSHCGFL 282

Query: 181 EQGWRYFTSMVKDYGISPKIEHYSCLVDLLARSGLLREAAEIIDRMPFNPVAIFWRTLLN 2
           E+G RYF SM++D GISP +EH+S +VDL AR G + EA  ++  MPF P  +FWR LL+
Sbjct: 283 EEGIRYFNSMIRDSGISPGVEHFSTMVDLYARGGKIEEAYRLMVAMPFEPTIVFWRALLS 342


>gb|ACD56648.1| putative pentatricopeptide repeat protein [Gossypioides kirkii]
          Length = 805

 Score =  146 bits (369), Expect = 5e-33
 Identities = 63/119 (52%), Positives = 85/119 (71%)
 Frame = -1

Query: 361 FTSMPHLDMVTWNSMVTGYGQHGSGAEAIIVFNQMEEAGFQPDEISFLGVLQGCSHSGLV 182
           F  +P  D+V+W  M++GYG HG G EAI  FN+M +AG +PDE+SF+ +L  CSHSGL+
Sbjct: 490 FDMIPSKDLVSWTVMISGYGMHGYGNEAIATFNEMRDAGIEPDEVSFISILYACSHSGLL 549

Query: 181 EQGWRYFTSMVKDYGISPKIEHYSCLVDLLARSGLLREAAEIIDRMPFNPVAIFWRTLL 5
           EQGWR+F  M  D+ I PK+EHY+C+VDLL+R+G L +A E I+ +P  P A  W  LL
Sbjct: 550 EQGWRFFYIMKNDFNIEPKLEHYACMVDLLSRTGNLSKAYEFIETLPIAPDATIWGALL 608


>gb|EYU19813.1| hypothetical protein MIMGU_mgv1a024453mg, partial [Erythranthe
           guttata]
          Length = 438

 Score =  146 bits (369), Expect = 5e-33
 Identities = 65/120 (54%), Positives = 87/120 (72%)
 Frame = -1

Query: 361 FTSMPHLDMVTWNSMVTGYGQHGSGAEAIIVFNQMEEAGFQPDEISFLGVLQGCSHSGLV 182
           F+ M   D VTWNSM+ G+ QHG G EA ++F+QM++A F PD IS++GVL GCSH G +
Sbjct: 223 FSEMDKPDRVTWNSMIMGFSQHGYGLEATMLFHQMQKARFLPDSISYVGVLHGCSHCGFL 282

Query: 181 EQGWRYFTSMVKDYGISPKIEHYSCLVDLLARSGLLREAAEIIDRMPFNPVAIFWRTLLN 2
           E+G RYF SM++D GISP +EH+S +VDL AR G + EA  ++  MPF P  +FWR LL+
Sbjct: 283 EEGIRYFNSMIRDSGISPGVEHFSTMVDLYARGGKIEEAYRLMVAMPFEPTIVFWRALLS 342


>gb|AAT64016.1| putative pentatricopeptide repeat protein [Gossypium hirsutum]
          Length = 805

 Score =  146 bits (368), Expect = 7e-33
 Identities = 63/119 (52%), Positives = 84/119 (70%)
 Frame = -1

Query: 361 FTSMPHLDMVTWNSMVTGYGQHGSGAEAIIVFNQMEEAGFQPDEISFLGVLQGCSHSGLV 182
           F  +P  D+V+W  M+ GYG HG G EAI  FN+M +AG +PDE+SF+ +L  CSHSGL+
Sbjct: 490 FDMIPSKDLVSWTVMIAGYGMHGYGNEAIATFNEMRDAGIEPDEVSFISILYACSHSGLL 549

Query: 181 EQGWRYFTSMVKDYGISPKIEHYSCLVDLLARSGLLREAAEIIDRMPFNPVAIFWRTLL 5
           EQGWR+F  M  D+ I PK+EHY+C+VDLL+R+G L +A E I+ +P  P A  W  LL
Sbjct: 550 EQGWRFFYIMKNDFNIEPKLEHYACMVDLLSRTGNLSKAYEFIETLPIAPDATIWGALL 608



 Score = 56.6 bits (135), Expect = 7e-06
 Identities = 31/119 (26%), Positives = 58/119 (48%)
 Frame = -1

Query: 361 FTSMPHLDMVTWNSMVTGYGQHGSGAEAIIVFNQMEEAGFQPDEISFLGVLQGCSHSGLV 182
           F  M   ++V+W SM+ GY + G    AI +  QME+ G + D ++   +L  C+ SG +
Sbjct: 309 FEKMGERNVVSWTSMIAGYTRDGRSDGAIKLLQQMEKEGVKLDVVAITSILHACARSGSL 368

Query: 181 EQGWRYFTSMVKDYGISPKIEHYSCLVDLLARSGLLREAAEIIDRMPFNPVAIFWRTLL 5
           + G +     +K   +   +   + L+D+ A+ G +  A  +   M    + I W T++
Sbjct: 369 DNG-KDVHDYIKANNMESNLFVCNALMDMYAKCGSMEAANSVFSTMVVKDI-ISWNTMI 425


>ref|XP_012440013.1| PREDICTED: pentatricopeptide repeat-containing protein At3g49170,
           chloroplastic [Gossypium raimondii]
           gi|763785523|gb|KJB52594.1| hypothetical protein
           B456_008G269700 [Gossypium raimondii]
          Length = 859

 Score =  145 bits (367), Expect = 9e-33
 Identities = 62/119 (52%), Positives = 90/119 (75%)
 Frame = -1

Query: 361 FTSMPHLDMVTWNSMVTGYGQHGSGAEAIIVFNQMEEAGFQPDEISFLGVLQGCSHSGLV 182
           F  M   +++TW SM+TG+ +HG  A A+ +F++M +AG +P+EI+++ VL  CSH+GLV
Sbjct: 545 FNEMGDRNVITWTSMITGFAKHGFAARALEIFHEMLKAGIRPNEITYIAVLSACSHAGLV 604

Query: 181 EQGWRYFTSMVKDYGISPKIEHYSCLVDLLARSGLLREAAEIIDRMPFNPVAIFWRTLL 5
            +GW  F SM K++GI+P++EHY+C+VDLL RSGLLREA E I++MP  P A+ WRT L
Sbjct: 605 SEGWEIFKSMHKEHGIAPRMEHYACMVDLLGRSGLLREAIEFINKMPCTPDALVWRTFL 663


>ref|XP_009624280.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g21065-like [Nicotiana tomentosiformis]
          Length = 602

 Score =  145 bits (367), Expect = 9e-33
 Identities = 63/119 (52%), Positives = 87/119 (73%)
 Frame = -1

Query: 361 FTSMPHLDMVTWNSMVTGYGQHGSGAEAIIVFNQMEEAGFQPDEISFLGVLQGCSHSGLV 182
           F SM   ++V+W S++ G   HG G EA+ +F +M++ G  PD++SF+G+L  CSHSGLV
Sbjct: 288 FRSMSQRNIVSWTSVIDGMAMHGRGTEAVSLFEEMKKDGVVPDDVSFIGLLTACSHSGLV 347

Query: 181 EQGWRYFTSMVKDYGISPKIEHYSCLVDLLARSGLLREAAEIIDRMPFNPVAIFWRTLL 5
           EQG  YF SM K++GISPKIEHY C+VDLL R+GL++EA + + RMP  P  + WRTL+
Sbjct: 348 EQGKGYFYSMTKEFGISPKIEHYGCMVDLLCRAGLVQEALDFVQRMPIKPNPVIWRTLI 406



 Score = 62.4 bits (150), Expect = 1e-07
 Identities = 32/120 (26%), Positives = 65/120 (54%)
 Frame = -1

Query: 361 FTSMPHLDMVTWNSMVTGYGQHGSGAEAIIVFNQMEEAGFQPDEISFLGVLQGCSHSGLV 182
           F  MP  D V W++M+ GY + G   EA+ +F +M+ AG  PDE++ + +L  C+  G +
Sbjct: 187 FDEMPKWDSVGWSAMIGGYVRWGLSCEAVELFREMQVAGVAPDEVTMVCLLSACTDLGAL 246

Query: 181 EQGWRYFTSMVKDYGISPKIEHYSCLVDLLARSGLLREAAEIIDRMPFNPVAIFWRTLLN 2
           E G ++  + ++   I      ++ L+D+ A+ G + +A  +   M    + + W ++++
Sbjct: 247 ELG-KWLEAYIERENILKSAVLWNALIDMFAKCGDVDKALSLFRSMSQRNI-VSWTSVID 304


>ref|XP_011620442.1| PREDICTED: pentatricopeptide repeat-containing protein At5g16860
           [Amborella trichopoda]
          Length = 786

 Score =  145 bits (366), Expect = 1e-32
 Identities = 64/120 (53%), Positives = 82/120 (68%)
 Frame = -1

Query: 361 FTSMPHLDMVTWNSMVTGYGQHGSGAEAIIVFNQMEEAGFQPDEISFLGVLQGCSHSGLV 182
           F  MPH + ++W +M+TGYG HG G EA+  F  M  AG  PD+I+FL VL  CSH+GLV
Sbjct: 472 FDYMPHKNSISWTTMMTGYGLHGRGVEALATFESMRRAGLPPDDITFLVVLYACSHAGLV 531

Query: 181 EQGWRYFTSMVKDYGISPKIEHYSCLVDLLARSGLLREAAEIIDRMPFNPVAIFWRTLLN 2
           + GW YF SM KD G+ P +EHY+C+VDLLAR+G L EA  +I  MP  P A+ W  LL+
Sbjct: 532 DHGWLYFNSMTKDSGVRPGVEHYACMVDLLARAGRLNEAQVLIGSMPMEPSAVVWVALLS 591



 Score = 60.1 bits (144), Expect = 6e-07
 Identities = 28/102 (27%), Positives = 56/102 (54%)
 Frame = -1

Query: 343 LDMVTWNSMVTGYGQHGSGAEAIIVFNQMEEAGFQPDEISFLGVLQGCSHSGLVEQGWRY 164
           L+++TW+++++GY Q G G EA+ VF +M+ A  +P+ ++ + +L  CS +G +  G R 
Sbjct: 274 LNVITWSAVISGYAQRGRGTEALRVFREMQVARAEPNHVTLISLLSACSSAGALLHG-RE 332

Query: 163 FTSMVKDYGISPKIEHYSCLVDLLARSGLLREAAEIIDRMPF 38
             + +  +G    +   + L+D  A+      A  + D + F
Sbjct: 333 IHAYITKFGWCDNLMVKNALIDTYAKCRDYEHALRLFDSVAF 374


>gb|ACD56662.1| putative pentatricopeptide [Gossypium arboreum]
          Length = 805

 Score =  145 bits (365), Expect = 2e-32
 Identities = 62/119 (52%), Positives = 84/119 (70%)
 Frame = -1

Query: 361 FTSMPHLDMVTWNSMVTGYGQHGSGAEAIIVFNQMEEAGFQPDEISFLGVLQGCSHSGLV 182
           F  +P  D+V+W  M+ GYG HG G EAI  FN+M +AG +PDE+SF+ +L  CSHSGL+
Sbjct: 490 FDMIPSKDLVSWTVMIAGYGMHGYGNEAIATFNEMRDAGIEPDEVSFISILYACSHSGLL 549

Query: 181 EQGWRYFTSMVKDYGISPKIEHYSCLVDLLARSGLLREAAEIIDRMPFNPVAIFWRTLL 5
           EQGWR+F  M  D+ I PK+EHY+C+VDLL+R+G L +A E ++ +P  P A  W  LL
Sbjct: 550 EQGWRFFYIMKNDFNIEPKLEHYACMVDLLSRTGNLSKAYEFMETLPIAPDATIWGALL 608



 Score = 56.6 bits (135), Expect = 7e-06
 Identities = 31/119 (26%), Positives = 58/119 (48%)
 Frame = -1

Query: 361 FTSMPHLDMVTWNSMVTGYGQHGSGAEAIIVFNQMEEAGFQPDEISFLGVLQGCSHSGLV 182
           F  M   ++V+W SM+ GY + G    AI +  QME+ G + D ++   +L  C+ SG +
Sbjct: 309 FEKMGERNVVSWTSMIAGYTRDGRSDGAIKLLQQMEKEGVKLDVVAITSILHACARSGSL 368

Query: 181 EQGWRYFTSMVKDYGISPKIEHYSCLVDLLARSGLLREAAEIIDRMPFNPVAIFWRTLL 5
           + G +     +K   +   +   + L+D+ A+ G +  A  +   M    + I W T++
Sbjct: 369 DNG-KDVHDYIKANNMESNLFVCNALMDMYAKCGSMEAANSVFSTMVVKDI-ISWNTMI 425


>ref|XP_012456795.1| PREDICTED: pentatricopeptide repeat-containing protein DOT4,
           chloroplastic [Gossypium raimondii]
           gi|763802760|gb|KJB69698.1| hypothetical protein
           B456_011G038100 [Gossypium raimondii]
          Length = 875

 Score =  144 bits (364), Expect = 2e-32
 Identities = 62/119 (52%), Positives = 84/119 (70%)
 Frame = -1

Query: 361 FTSMPHLDMVTWNSMVTGYGQHGSGAEAIIVFNQMEEAGFQPDEISFLGVLQGCSHSGLV 182
           F  +P  D+V+W  M+ GYG HG G EAI  FN+M +AG +PDE+SF+ +L  CSHSGL+
Sbjct: 560 FDMIPSKDLVSWTVMIAGYGMHGYGNEAIATFNEMRDAGIEPDEVSFISILYACSHSGLL 619

Query: 181 EQGWRYFTSMVKDYGISPKIEHYSCLVDLLARSGLLREAAEIIDRMPFNPVAIFWRTLL 5
           EQGWR+F  M  D+ I PK+EHY+C+VDLL+R+G L +A + I+ +P  P A  W  LL
Sbjct: 620 EQGWRFFYIMKNDFNIEPKLEHYACMVDLLSRTGNLSKAYKFIETLPIAPDATIWGALL 678



 Score = 58.2 bits (139), Expect = 2e-06
 Identities = 32/119 (26%), Positives = 60/119 (50%)
 Frame = -1

Query: 361 FTSMPHLDMVTWNSMVTGYGQHGSGAEAIIVFNQMEEAGFQPDEISFLGVLQGCSHSGLV 182
           F  M   ++V+W SM+ GY + G    AII+  QME+ G + D ++   +L  C+ SG +
Sbjct: 359 FEKMGERNVVSWTSMIAGYTRDGWSDGAIILLQQMEKEGVKLDVVAITSILHACARSGSL 418

Query: 181 EQGWRYFTSMVKDYGISPKIEHYSCLVDLLARSGLLREAAEIIDRMPFNPVAIFWRTLL 5
           + G +     +K   ++  +   + L+D+ A+ G +  A  +   M    + I W T++
Sbjct: 419 DNG-KDVHDYIKANNMASNLFVCNALMDMYAKCGSMEGANSVFSTMVVKDI-ISWNTMV 475


>gb|ACD56635.1| putative pentatricopeptide repeat protein [Gossypium raimondii]
          Length = 667

 Score =  144 bits (364), Expect = 2e-32
 Identities = 62/119 (52%), Positives = 84/119 (70%)
 Frame = -1

Query: 361 FTSMPHLDMVTWNSMVTGYGQHGSGAEAIIVFNQMEEAGFQPDEISFLGVLQGCSHSGLV 182
           F  +P  D+V+W  M+ GYG HG G EAI  FN+M +AG +PDE+SF+ +L  CSHSGL+
Sbjct: 352 FDMIPSKDLVSWTVMIAGYGMHGYGNEAIATFNEMRDAGIEPDEVSFISILYACSHSGLL 411

Query: 181 EQGWRYFTSMVKDYGISPKIEHYSCLVDLLARSGLLREAAEIIDRMPFNPVAIFWRTLL 5
           EQGWR+F  M  D+ I PK+EHY+C+VDLL+R+G L +A + I+ +P  P A  W  LL
Sbjct: 412 EQGWRFFYIMKNDFNIEPKLEHYACMVDLLSRTGNLSKAYKFIETLPIAPDATIWGALL 470



 Score = 58.2 bits (139), Expect = 2e-06
 Identities = 32/119 (26%), Positives = 60/119 (50%)
 Frame = -1

Query: 361 FTSMPHLDMVTWNSMVTGYGQHGSGAEAIIVFNQMEEAGFQPDEISFLGVLQGCSHSGLV 182
           F  M   ++V+W SM+ GY + G    AII+  QME+ G + D ++   +L  C+ SG +
Sbjct: 171 FEKMGERNVVSWTSMIAGYTRDGWSDGAIILLQQMEKEGVKLDVVAITSILHACARSGSL 230

Query: 181 EQGWRYFTSMVKDYGISPKIEHYSCLVDLLARSGLLREAAEIIDRMPFNPVAIFWRTLL 5
           + G +     +K   ++  +   + L+D+ A+ G +  A  +   M    + I W T++
Sbjct: 231 DNG-KDVHDYIKANNMASNLFVCNALMDMYAKCGSMEGANSVFSTMVVKDI-ISWNTMV 287


>gb|AHB18405.1| pentatricopeptide repeat-containing protein [Gossypium hirsutum]
          Length = 875

 Score =  144 bits (364), Expect = 2e-32
 Identities = 62/119 (52%), Positives = 84/119 (70%)
 Frame = -1

Query: 361 FTSMPHLDMVTWNSMVTGYGQHGSGAEAIIVFNQMEEAGFQPDEISFLGVLQGCSHSGLV 182
           F  +P  D+V+W  M+ GYG HG G EAI  FN+M +AG +PDE+SF+ +L  CSHSGL+
Sbjct: 560 FDMIPSKDLVSWTVMIAGYGMHGYGNEAIATFNEMRDAGIEPDEVSFISILYACSHSGLL 619

Query: 181 EQGWRYFTSMVKDYGISPKIEHYSCLVDLLARSGLLREAAEIIDRMPFNPVAIFWRTLL 5
           EQGWR+F  M  D+ I PK+EHY+C+VDLL+R+G L +A + I+ +P  P A  W  LL
Sbjct: 620 EQGWRFFYIMKNDFNIEPKLEHYACMVDLLSRTGNLSKAYKFIETLPIAPDATIWGALL 678



 Score = 58.2 bits (139), Expect = 2e-06
 Identities = 32/119 (26%), Positives = 60/119 (50%)
 Frame = -1

Query: 361 FTSMPHLDMVTWNSMVTGYGQHGSGAEAIIVFNQMEEAGFQPDEISFLGVLQGCSHSGLV 182
           F  M   ++V+W SM+ GY + G    AII+  QME+ G + D ++   +L  C+ SG +
Sbjct: 359 FEKMGERNVVSWTSMIAGYTRDGWSDGAIILLQQMEKEGVKLDVVAITSILHACARSGSL 418

Query: 181 EQGWRYFTSMVKDYGISPKIEHYSCLVDLLARSGLLREAAEIIDRMPFNPVAIFWRTLL 5
           + G +     +K   ++  +   + L+D+ A+ G +  A  +   M    + I W T++
Sbjct: 419 DNG-KDVHDYIKANNMASNLFVCNALMDMYAKCGSMEGANSVFSTMVVKDI-ISWNTMV 475


>gb|AAT64030.1| putative pentatricopeptide repeat protein [Gossypium hirsutum]
          Length = 805

 Score =  144 bits (364), Expect = 2e-32
 Identities = 62/119 (52%), Positives = 84/119 (70%)
 Frame = -1

Query: 361 FTSMPHLDMVTWNSMVTGYGQHGSGAEAIIVFNQMEEAGFQPDEISFLGVLQGCSHSGLV 182
           F  +P  D+V+W  M+ GYG HG G EAI  FN+M +AG +PDE+SF+ +L  CSHSGL+
Sbjct: 490 FDMIPSKDLVSWTVMIAGYGMHGYGNEAIATFNEMRDAGIEPDEVSFISILYACSHSGLL 549

Query: 181 EQGWRYFTSMVKDYGISPKIEHYSCLVDLLARSGLLREAAEIIDRMPFNPVAIFWRTLL 5
           EQGWR+F  M  D+ I PK+EHY+C+VDLL+R+G L +A + I+ +P  P A  W  LL
Sbjct: 550 EQGWRFFYIMKNDFNIEPKLEHYACMVDLLSRTGNLSKAYKFIETLPIAPDATIWGALL 608



 Score = 58.2 bits (139), Expect = 2e-06
 Identities = 32/119 (26%), Positives = 60/119 (50%)
 Frame = -1

Query: 361 FTSMPHLDMVTWNSMVTGYGQHGSGAEAIIVFNQMEEAGFQPDEISFLGVLQGCSHSGLV 182
           F  M   ++V+W SM+ GY + G    AII+  QME+ G + D ++   +L  C+ SG +
Sbjct: 309 FEKMGERNVVSWTSMIAGYTRDGWSDGAIILLQQMEKEGVKLDVVAITSILHACARSGSL 368

Query: 181 EQGWRYFTSMVKDYGISPKIEHYSCLVDLLARSGLLREAAEIIDRMPFNPVAIFWRTLL 5
           + G +     +K   ++  +   + L+D+ A+ G +  A  +   M    + I W T++
Sbjct: 369 DNG-KDVHDYIKANNMASNLFVCNALMDMYAKCGSMEGANSVFSTMVVKDI-ISWNTMV 425


Top