BLASTX nr result

ID: Cinnamomum24_contig00029393 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cinnamomum24_contig00029393
         (351 letters)

Database: ./nr 
           77,306,371 sequences; 28,104,191,420 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_008787518.1| PREDICTED: pentatricopeptide repeat-containi...    65   3e-08
ref|XP_010934787.1| PREDICTED: pentatricopeptide repeat-containi...    59   1e-06
ref|XP_006583812.1| PREDICTED: pentatricopeptide repeat-containi...    59   1e-06
ref|XP_006583811.1| PREDICTED: pentatricopeptide repeat-containi...    59   1e-06

>ref|XP_008787518.1| PREDICTED: pentatricopeptide repeat-containing protein At5g14770,
           mitochondrial [Phoenix dactylifera]
           gi|672128082|ref|XP_008787520.1| PREDICTED:
           pentatricopeptide repeat-containing protein At5g14770,
           mitochondrial [Phoenix dactylifera]
          Length = 998

 Score = 64.7 bits (156), Expect = 3e-08
 Identities = 39/80 (48%), Positives = 52/80 (65%), Gaps = 5/80 (6%)
 Frame = -2

Query: 227 MRNLRNMQKLTSFKPNSLPFLFRPSSHFSSNHQNPTTNIPSLPFSSPPHCTHQQ-----I 63
           M+ L+ ++ L S  P+SLP L   SS FSS+  +    +PSLP S  PH TH+      I
Sbjct: 1   MKPLKRIKTLASPNPHSLPSL---SSLFSSSPSDQKPLLPSLP-SQNPHQTHESPPQSPI 56

Query: 62  PPSKTNLYSSFFCSLIELYL 3
           PPSK++LY+SFFCSLIE Y+
Sbjct: 57  PPSKSHLYASFFCSLIETYI 76


>ref|XP_010934787.1| PREDICTED: pentatricopeptide repeat-containing protein At5g14770,
           mitochondrial [Elaeis guineensis]
           gi|743831754|ref|XP_010934788.1| PREDICTED:
           pentatricopeptide repeat-containing protein At5g14770,
           mitochondrial [Elaeis guineensis]
           gi|743831760|ref|XP_010934789.1| PREDICTED:
           pentatricopeptide repeat-containing protein At5g14770,
           mitochondrial [Elaeis guineensis]
           gi|743831764|ref|XP_010934790.1| PREDICTED:
           pentatricopeptide repeat-containing protein At5g14770,
           mitochondrial [Elaeis guineensis]
          Length = 998

 Score = 58.9 bits (141), Expect = 1e-06
 Identities = 36/80 (45%), Positives = 52/80 (65%), Gaps = 5/80 (6%)
 Frame = -2

Query: 227 MRNLRNMQKLTSFKPNSLPFLFRPSSHFSSNHQNPTTNIPSLPFSSPPHCTHQQ-----I 63
           M+ L+ ++ L S  P++LP L   SS FSS+  +  + +PS P S  P+ THQ      I
Sbjct: 1   MKPLKRIKTLASSNPHALPPL---SSFFSSSPPSQKSLLPSHP-SQNPNRTHQSPPQSPI 56

Query: 62  PPSKTNLYSSFFCSLIELYL 3
           PPS+++LY+SFFCSLIE Y+
Sbjct: 57  PPSRSHLYASFFCSLIETYV 76


>ref|XP_006583812.1| PREDICTED: pentatricopeptide repeat-containing protein At5g14770,
           mitochondrial-like isoform X2 [Glycine max]
          Length = 867

 Score = 58.9 bits (141), Expect = 1e-06
 Identities = 35/75 (46%), Positives = 42/75 (56%)
 Frame = -2

Query: 227 MRNLRNMQKLTSFKPNSLPFLFRPSSHFSSNHQNPTTNIPSLPFSSPPHCTHQQIPPSKT 48
           M +L+N+Q  T F      F+F PS  F   H NP        FSSP H     IPP+KT
Sbjct: 16  MMHLKNLQSKTLF------FVFSPSRTFHRPHYNPIRR-----FSSPIHKDSILIPPTKT 64

Query: 47  NLYSSFFCSLIELYL 3
            LY+SFFC+LI LYL
Sbjct: 65  LLYASFFCALIRLYL 79


>ref|XP_006583811.1| PREDICTED: pentatricopeptide repeat-containing protein At5g14770,
           mitochondrial-like isoform X1 [Glycine max]
           gi|947101518|gb|KRH50010.1| hypothetical protein
           GLYMA_07G194900 [Glycine max]
          Length = 1037

 Score = 58.9 bits (141), Expect = 1e-06
 Identities = 35/75 (46%), Positives = 42/75 (56%)
 Frame = -2

Query: 227 MRNLRNMQKLTSFKPNSLPFLFRPSSHFSSNHQNPTTNIPSLPFSSPPHCTHQQIPPSKT 48
           M +L+N+Q  T F      F+F PS  F   H NP        FSSP H     IPP+KT
Sbjct: 16  MMHLKNLQSKTLF------FVFSPSRTFHRPHYNPIRR-----FSSPIHKDSILIPPTKT 64

Query: 47  NLYSSFFCSLIELYL 3
            LY+SFFC+LI LYL
Sbjct: 65  LLYASFFCALIRLYL 79


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