BLASTX nr result

ID: Cinnamomum24_contig00029124 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cinnamomum24_contig00029124
         (356 letters)

Database: ./nr 
           77,306,371 sequences; 28,104,191,420 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002539514.1| conserved hypothetical protein [Ricinus comm...    80   4e-18
ref|XP_010112427.1| putative mitochondrial protein [Morus notabi...    90   7e-16
gb|AGC78970.1| hypothetical protein (mitochondrion) [Vicia faba]...    80   8e-16
ref|YP_006291803.1| orf34 (mitochondrion) [Daucus carota subsp. ...    84   3e-14
gb|AGC78969.1| hypothetical protein (mitochondrion) [Vicia faba]...    63   1e-07
ref|XP_002540127.1| conserved hypothetical protein [Ricinus comm...    44   1e-07

>ref|XP_002539514.1| conserved hypothetical protein [Ricinus communis]
           gi|223505440|gb|EEF22868.1| conserved hypothetical
           protein, partial [Ricinus communis]
          Length = 124

 Score = 79.7 bits (195), Expect(2) = 4e-18
 Identities = 36/36 (100%), Positives = 36/36 (100%)
 Frame = -3

Query: 201 ARPNRATTWDGNGSAHMHHLMKALQSSRLLEVACQP 94
           ARPNRATTWDGNGSAHMHHLMKALQSSRLLEVACQP
Sbjct: 1   ARPNRATTWDGNGSAHMHHLMKALQSSRLLEVACQP 36



 Score = 38.1 bits (87), Expect(2) = 4e-18
 Identities = 20/28 (71%), Positives = 20/28 (71%), Gaps = 1/28 (3%)
 Frame = -2

Query: 82  LLTKCP-WVGATRHMSSSLQDPTPSRAG 2
           LLTKCP W      MSSSLQD TPSRAG
Sbjct: 45  LLTKCPSWGWGNTAMSSSLQDSTPSRAG 72


>ref|XP_010112427.1| putative mitochondrial protein [Morus notabilis]
           gi|587947246|gb|EXC33548.1| putative mitochondrial
           protein [Morus notabilis]
          Length = 478

 Score = 89.7 bits (221), Expect = 7e-16
 Identities = 51/72 (70%), Positives = 52/72 (72%), Gaps = 6/72 (8%)
 Frame = -2

Query: 199 QAESGHHLGWEWLSPHASFDESTPVQSPSRSGLSTTGP*LLTKCP------WVGATRHMS 38
           QAESGH LGWEW +PHASFDESTPVQSP RSGLSTT     T  P      W G T  MS
Sbjct: 233 QAESGHPLGWEWPNPHASFDESTPVQSPPRSGLSTTLSLSQTNAPHQISLGW-GKTA-MS 290

Query: 37  SSLQDPTPSRAG 2
           SSLQDPTPSRAG
Sbjct: 291 SSLQDPTPSRAG 302


>gb|AGC78970.1| hypothetical protein (mitochondrion) [Vicia faba]
           gi|442803262|gb|AGC78997.1| hypothetical protein
           (mitochondrion) [Vicia faba]
          Length = 111

 Score = 80.1 bits (196), Expect(2) = 8e-16
 Identities = 40/73 (54%), Positives = 40/73 (54%)
 Frame = +3

Query: 126 TGVLSSNDACGLSHSHPKWWPDSAWPGXXXXXXXXXXXXXXXSMFXXXXXXXXXXXXXXX 305
           TGVLSSNDA GLSHSHPKWWPDSAWPG               SM                
Sbjct: 30  TGVLSSNDAYGLSHSHPKWWPDSAWPGREEIHIDTFAIRESLSMLASGGRLSYDSPAAAS 89

Query: 306 DRPSRLILIWLYL 344
           DRP RLILIWLYL
Sbjct: 90  DRPLRLILIWLYL 102



 Score = 30.0 bits (66), Expect(2) = 8e-16
 Identities = 15/32 (46%), Positives = 19/32 (59%), Gaps = 6/32 (18%)
 Frame = +1

Query: 52  LPQPKGIW*GAT------VRWLTSHFEKATGL 129
           +PQPK +  G          WLTSHFE+ATG+
Sbjct: 1   MPQPKAVKVGEEHCFEGGKAWLTSHFEEATGV 32


>ref|YP_006291803.1| orf34 (mitochondrion) [Daucus carota subsp. sativus]
           gi|374081980|gb|AEY81172.1| orf34 (mitochondrion)
           [Daucus carota subsp. sativus]
          Length = 148

 Score = 84.3 bits (207), Expect = 3e-14
 Identities = 53/114 (46%), Positives = 55/114 (48%), Gaps = 4/114 (3%)
 Frame = +3

Query: 15  GVGSWSELLMCRVAPTQGH-LVRSYGPVVDKPLREGDW---TGVLSSNDACGLSHSHPKW 182
           G G       C VAPTQG  L   +   V K      +   TGVLSSNDACGLSHSHPK 
Sbjct: 26  GGGLLERTTHCCVAPTQGRALGEEHCFEVGKAWLTNHFEEATGVLSSNDACGLSHSHPKR 85

Query: 183 WPDSAWPGXXXXXXXXXXXXXXXSMFXXXXXXXXXXXXXXXDRPSRLILIWLYL 344
           WPDSAWPG               SM                DRPSRLILIWLYL
Sbjct: 86  WPDSAWPGREESHIETTTLRESLSMLACGGGLSYGSPAATSDRPSRLILIWLYL 139


>gb|AGC78969.1| hypothetical protein (mitochondrion) [Vicia faba]
           gi|442803261|gb|AGC78996.1| hypothetical protein
           (mitochondrion) [Vicia faba]
          Length = 103

 Score = 62.8 bits (151), Expect = 1e-07
 Identities = 40/69 (57%), Positives = 43/69 (62%), Gaps = 10/69 (14%)
 Frame = -2

Query: 178 LGWEWLSPHASFDESTPVQS----------PSRSGLSTTGP*LLTKCPWVGATRHMSSSL 29
           +GWEWLSP+ASFDESTPV S          PS+   S T    LT   W G T  MSSSL
Sbjct: 1   MGWEWLSPYASFDESTPVASSKWLVNHAFPPSKQCSSPT----LTALGW-GKTA-MSSSL 54

Query: 28  QDPTPSRAG 2
           QDPTPSRAG
Sbjct: 55  QDPTPSRAG 63


>ref|XP_002540127.1| conserved hypothetical protein [Ricinus communis]
           gi|223498957|gb|EEF22255.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 108

 Score = 44.3 bits (103), Expect(2) = 1e-07
 Identities = 20/20 (100%), Positives = 20/20 (100%)
 Frame = -3

Query: 153 MHHLMKALQSSRLLEVACQP 94
           MHHLMKALQSSRLLEVACQP
Sbjct: 1   MHHLMKALQSSRLLEVACQP 20



 Score = 38.1 bits (87), Expect(2) = 1e-07
 Identities = 20/28 (71%), Positives = 20/28 (71%), Gaps = 1/28 (3%)
 Frame = -2

Query: 82  LLTKCP-WVGATRHMSSSLQDPTPSRAG 2
           LLTKCP W      MSSSLQD TPSRAG
Sbjct: 29  LLTKCPSWGWGNTAMSSSLQDSTPSRAG 56


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