BLASTX nr result

ID: Cinnamomum24_contig00029029 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cinnamomum24_contig00029029
         (417 letters)

Database: ./nr 
           77,306,371 sequences; 28,104,191,420 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_010278396.1| PREDICTED: F-box protein At4g09920-like [Nel...    80   8e-13
ref|XP_010932063.1| PREDICTED: F-box/FBD/LRR-repeat protein At1g...    77   4e-12
ref|XP_008775926.1| PREDICTED: F-box/FBD/LRR-repeat protein At1g...    60   8e-07

>ref|XP_010278396.1| PREDICTED: F-box protein At4g09920-like [Nelumbo nucifera]
          Length = 554

 Score = 79.7 bits (195), Expect = 8e-13
 Identities = 59/157 (37%), Positives = 87/157 (55%), Gaps = 21/157 (13%)
 Frame = -3

Query: 409 FPITLPNLIELQLGVCDQYPGGPIA----FFRYWNFPCLEKLVLEWIPPF----CTWMDW 254
           FPIT PNL+ELQL + +    G ++    FF+   FPCLEKL ++ +P +      W D 
Sbjct: 363 FPITFPNLLELQL-LMETLQYGYLSYMYGFFKNTRFPCLEKLFIQ-LPDYGDDPTPWEDS 420

Query: 253 ----TEESSGCVFHHLKTITLNGFYGSGWQMMVVKFLLNKAVLLETMVLV------TPKE 104
                +E S CVF  L TI +N F GS  ++ +VKF L+KAV L   VLV      + K+
Sbjct: 421 IMPDVKEPSECVFSDLHTIKINNFTGSSPELALVKFFLDKAVNLHFFVLVWHQNPFSEKD 480

Query: 103 GIEAYRSDESLSQAKP---NVALLHEQLLLLPKVSTN 2
             +  +   +LSQ++P    + L+ +QLL  PK S++
Sbjct: 481 VDDNKKDSTTLSQSQPYESRLRLVEKQLLTFPKASSD 517


>ref|XP_010932063.1| PREDICTED: F-box/FBD/LRR-repeat protein At1g13570-like [Elaeis
           guineensis]
          Length = 458

 Score = 77.4 bits (189), Expect = 4e-12
 Identities = 61/147 (41%), Positives = 81/147 (55%), Gaps = 14/147 (9%)
 Frame = -3

Query: 406 PITLPNLIELQLGVCDQYPGGPIA----FFRYWNFPCLEKLVLEWI--PPFCTWMDWTEE 245
           P+ LPNL ELQL + D +    +A    FFR    P +EKL ++    P     +    E
Sbjct: 286 PVLLPNLRELQL-LIDLFRSEELAYIYGFFRLCQTPFIEKLFIQLPKGPEDPQEIRSVPE 344

Query: 244 SSGCVFHHLKTITLNGFYGSGWQMMVVKFLLNKAVLLETMVLVTP-----KEGI--EAYR 86
            S   F+HLK I L+ F G   +M +V+FLL +AV+LETMVLV P     KE I  E Y 
Sbjct: 345 PSDITFNHLKAIKLSNFKGGMSEMRLVRFLLERAVVLETMVLVAPPKADLKESINHEQYN 404

Query: 85  S-DESLSQAKPNVALLHEQLLLLPKVS 8
           S  E++SQ   ++ +L  QL LLPK S
Sbjct: 405 SASEAISQDNVDLMVLRGQLSLLPKTS 431


>ref|XP_008775926.1| PREDICTED: F-box/FBD/LRR-repeat protein At1g13570-like [Phoenix
           dactylifera]
          Length = 404

 Score = 59.7 bits (143), Expect = 8e-07
 Identities = 39/89 (43%), Positives = 51/89 (57%), Gaps = 8/89 (8%)
 Frame = -3

Query: 250 EESSGCVFHHLKTITLNGFYGSGWQMMVVKFLLNKAVLLETMVLVTP-----KEGI---E 95
           +E S   F+HLK I L+ F G   +M +V+FLL +AV LETMVLVTP     K  I   +
Sbjct: 289 QEPSDVTFNHLKAIKLSNFKGGMSEMRLVRFLLERAVALETMVLVTPPKVDLKGSINHEQ 348

Query: 94  AYRSDESLSQAKPNVALLHEQLLLLPKVS 8
            + + E+ SQ   +   L  QL LLPK S
Sbjct: 349 NHSASETTSQNNVDSIFLRGQLSLLPKTS 377


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