BLASTX nr result

ID: Cinnamomum24_contig00028851 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cinnamomum24_contig00028851
         (353 letters)

Database: ./nr 
           77,306,371 sequences; 28,104,191,420 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AEX57692.1| hypothetical protein RasatMp061 (mitochondrion) [...    94   2e-18
gb|KJB09768.1| hypothetical protein B456_001G163500 [Gossypium r...    78   3e-12

>gb|AEX57692.1| hypothetical protein RasatMp061 (mitochondrion) [Raphanus sativus]
          Length = 126

 Score = 94.4 bits (233), Expect(2) = 2e-18
 Identities = 46/52 (88%), Positives = 49/52 (94%)
 Frame = +1

Query: 136 SLADATMNRTRSKHSAVDGQTLPERRPQTKDGQAPVPRVRVFPIMSLLRSEL 291
           + ADA MNRTRSKHSAVDGQTLP+RRPQTKDGQAPVPRV VFPIMSLL+SEL
Sbjct: 55  TFADAIMNRTRSKHSAVDGQTLPKRRPQTKDGQAPVPRVIVFPIMSLLKSEL 106



 Score = 24.6 bits (52), Expect(2) = 2e-18
 Identities = 10/14 (71%), Positives = 13/14 (92%)
 Frame = +3

Query: 282 IRTPLVDSLSPIGR 323
           +++ LVDSLSPIGR
Sbjct: 102 LKSELVDSLSPIGR 115


>gb|KJB09768.1| hypothetical protein B456_001G163500 [Gossypium raimondii]
          Length = 184

 Score = 77.8 bits (190), Expect = 3e-12
 Identities = 36/40 (90%), Positives = 39/40 (97%)
 Frame = +1

Query: 154 MNRTRSKHSAVDGQTLPERRPQTKDGQAPVPRVRVFPIMS 273
           MNRTRSKHSAVDGQTLP+RRPQTKDGQAPVPRV VFPI++
Sbjct: 1   MNRTRSKHSAVDGQTLPKRRPQTKDGQAPVPRVIVFPILT 40


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