BLASTX nr result

ID: Cinnamomum24_contig00028801 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cinnamomum24_contig00028801
         (275 letters)

Database: ./nr 
           77,306,371 sequences; 28,104,191,420 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_010261639.1| PREDICTED: protein SMG9-like isoform X3 [Nel...    68   3e-09
ref|XP_010261638.1| PREDICTED: protein SMG9-like isoform X2 [Nel...    68   3e-09
ref|XP_010261637.1| PREDICTED: protein SMG9-like isoform X1 [Nel...    68   3e-09
ref|XP_010662114.1| PREDICTED: protein SMG9 isoform X1 [Vitis vi...    63   8e-08
ref|XP_002274201.1| PREDICTED: protein SMG9 isoform X2 [Vitis vi...    63   8e-08
ref|XP_004147641.1| PREDICTED: protein SMG9-like [Cucumis sativu...    59   1e-06
ref|XP_003516730.1| PREDICTED: protein SMG9-like [Glycine max] g...    58   3e-06
ref|XP_004511426.1| PREDICTED: protein SMG9-like [Cicer arietinum]     57   4e-06

>ref|XP_010261639.1| PREDICTED: protein SMG9-like isoform X3 [Nelumbo nucifera]
          Length = 340

 Score = 67.8 bits (164), Expect = 3e-09
 Identities = 33/53 (62%), Positives = 36/53 (67%)
 Frame = -3

Query: 159 KILLTKPASVPVGSAVPKLIRSGGGAEDEPFVLRSRAHSLSSLNLLSDAWDFH 1
           KILL KP SVP GS V K IR G G +DE   LRSR     SLNLLSD+W+FH
Sbjct: 18  KILLAKPGSVPAGSTVAKFIRGGTGGDDESLALRSRLPPPGSLNLLSDSWEFH 70


>ref|XP_010261638.1| PREDICTED: protein SMG9-like isoform X2 [Nelumbo nucifera]
          Length = 380

 Score = 67.8 bits (164), Expect = 3e-09
 Identities = 33/53 (62%), Positives = 36/53 (67%)
 Frame = -3

Query: 159 KILLTKPASVPVGSAVPKLIRSGGGAEDEPFVLRSRAHSLSSLNLLSDAWDFH 1
           KILL KP SVP GS V K IR G G +DE   LRSR     SLNLLSD+W+FH
Sbjct: 18  KILLAKPGSVPAGSTVAKFIRGGTGGDDESLALRSRLPPPGSLNLLSDSWEFH 70


>ref|XP_010261637.1| PREDICTED: protein SMG9-like isoform X1 [Nelumbo nucifera]
          Length = 410

 Score = 67.8 bits (164), Expect = 3e-09
 Identities = 33/53 (62%), Positives = 36/53 (67%)
 Frame = -3

Query: 159 KILLTKPASVPVGSAVPKLIRSGGGAEDEPFVLRSRAHSLSSLNLLSDAWDFH 1
           KILL KP SVP GS V K IR G G +DE   LRSR     SLNLLSD+W+FH
Sbjct: 18  KILLAKPGSVPAGSTVAKFIRGGTGGDDESLALRSRLPPPGSLNLLSDSWEFH 70


>ref|XP_010662114.1| PREDICTED: protein SMG9 isoform X1 [Vitis vinifera]
          Length = 431

 Score = 63.2 bits (152), Expect = 8e-08
 Identities = 35/59 (59%), Positives = 38/59 (64%), Gaps = 6/59 (10%)
 Frame = -3

Query: 159 KILLTKPASVPVGSAVPKLIRSG------GGAEDEPFVLRSRAHSLSSLNLLSDAWDFH 1
           KILL KP  V  GS   KLIRSG      GGAEDE   LRSR   + SLNLLSD+W+FH
Sbjct: 20  KILLAKPGLVTTGSVSSKLIRSGAAGGGGGGAEDESVSLRSRLPPIGSLNLLSDSWEFH 78


>ref|XP_002274201.1| PREDICTED: protein SMG9 isoform X2 [Vitis vinifera]
           gi|297737327|emb|CBI26528.3| unnamed protein product
           [Vitis vinifera]
          Length = 419

 Score = 63.2 bits (152), Expect = 8e-08
 Identities = 35/59 (59%), Positives = 38/59 (64%), Gaps = 6/59 (10%)
 Frame = -3

Query: 159 KILLTKPASVPVGSAVPKLIRSG------GGAEDEPFVLRSRAHSLSSLNLLSDAWDFH 1
           KILL KP  V  GS   KLIRSG      GGAEDE   LRSR   + SLNLLSD+W+FH
Sbjct: 20  KILLAKPGLVTTGSVSSKLIRSGAAGGGGGGAEDESVSLRSRLPPIGSLNLLSDSWEFH 78


>ref|XP_004147641.1| PREDICTED: protein SMG9-like [Cucumis sativus]
           gi|700202090|gb|KGN57223.1| hypothetical protein
           Csa_3G171800 [Cucumis sativus]
          Length = 412

 Score = 59.3 bits (142), Expect = 1e-06
 Identities = 32/53 (60%), Positives = 36/53 (67%)
 Frame = -3

Query: 159 KILLTKPASVPVGSAVPKLIRSGGGAEDEPFVLRSRAHSLSSLNLLSDAWDFH 1
           KILL KP  VP G    K+ R G GA+DEP  +RSR  SL SLNLLSD+WD H
Sbjct: 21  KILLAKPGLVPGGPINSKIGR-GAGADDEPASIRSRLPSLGSLNLLSDSWDLH 72


>ref|XP_003516730.1| PREDICTED: protein SMG9-like [Glycine max]
           gi|947129837|gb|KRH77691.1| hypothetical protein
           GLYMA_01G228300 [Glycine max]
          Length = 392

 Score = 57.8 bits (138), Expect = 3e-06
 Identities = 31/53 (58%), Positives = 35/53 (66%)
 Frame = -3

Query: 159 KILLTKPASVPVGSAVPKLIRSGGGAEDEPFVLRSRAHSLSSLNLLSDAWDFH 1
           KILL KP  V  G    K  R GGG +D P  LRSR  S++SLNLLSD+WDFH
Sbjct: 9   KILLAKPGLVTGGPVAGKFGRGGGGDDDSP-QLRSRLPSVASLNLLSDSWDFH 60


>ref|XP_004511426.1| PREDICTED: protein SMG9-like [Cicer arietinum]
          Length = 396

 Score = 57.4 bits (137), Expect = 4e-06
 Identities = 31/53 (58%), Positives = 37/53 (69%)
 Frame = -3

Query: 159 KILLTKPASVPVGSAVPKLIRSGGGAEDEPFVLRSRAHSLSSLNLLSDAWDFH 1
           KILL KPA V  G+   K  R GG AE++   LRSR  S++SLNLLSD+WDFH
Sbjct: 11  KILLAKPALVTGGTVAGKFSR-GGAAEEDSSQLRSRLPSVASLNLLSDSWDFH 62


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