BLASTX nr result

ID: Cinnamomum24_contig00028691 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cinnamomum24_contig00028691
         (207 letters)

Database: ./nr 
           77,306,371 sequences; 28,104,191,420 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_006601410.1| PREDICTED: DEAD-box ATP-dependent RNA helica...    69   2e-09
ref|XP_009361722.1| PREDICTED: DEAD-box ATP-dependent RNA helica...    58   3e-06

>ref|XP_006601410.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 9-like [Glycine max]
          Length = 853

 Score = 68.6 bits (166), Expect = 2e-09
 Identities = 40/68 (58%), Positives = 48/68 (70%), Gaps = 2/68 (2%)
 Frame = -3

Query: 199 SLFLSRLRGVDPRSLGNPNNCSHQPSLFSPINYLFHLQPKSSQVMA--APEGSQFDARQF 26
           SL  SRLRGVDPRS GNPN+ S     F+     F L   S++VMA  APEGSQFDARQ+
Sbjct: 402 SLSFSRLRGVDPRSSGNPNSSS-----FTTEQRFFSLSIISTEVMAGLAPEGSQFDARQY 456

Query: 25  DAKMNELL 2
           D+KM++LL
Sbjct: 457 DSKMSDLL 464


>ref|XP_009361722.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 3,
           chloroplastic-like [Pyrus x bretschneideri]
          Length = 868

 Score = 57.8 bits (138), Expect = 3e-06
 Identities = 37/77 (48%), Positives = 47/77 (61%), Gaps = 9/77 (11%)
 Frame = -3

Query: 205 SFSLFLS-----RLRGVDPRSLGNPNNCSHQPSLFSP---INYLFHLQPKSSQVMAA-PE 53
           S SL LS     +LRG+DPRSLGNPN+   +  +      ++    L   S  VMAA PE
Sbjct: 403 SLSLSLSPSCIPQLRGLDPRSLGNPNSQKTRTKISCDALSLSLRLQLSHSSLAVMAAAPE 462

Query: 52  GSQFDARQFDAKMNELL 2
           GSQFD RQ+D KM+E+L
Sbjct: 463 GSQFDTRQYDTKMSEIL 479


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