BLASTX nr result

ID: Cinnamomum24_contig00028665 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cinnamomum24_contig00028665
         (302 letters)

Database: ./nr 
           77,306,371 sequences; 28,104,191,420 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_010245455.1| PREDICTED: transcription factor SOX-9-like [...    60   6e-07
ref|XP_010259440.1| PREDICTED: extensin-like [Nelumbo nucifera] ...    57   7e-06

>ref|XP_010245455.1| PREDICTED: transcription factor SOX-9-like [Nelumbo nucifera]
          Length = 245

 Score = 60.1 bits (144), Expect = 6e-07
 Identities = 28/39 (71%), Positives = 30/39 (76%)
 Frame = -1

Query: 302 YSRPEHYSDDYDYQIRSGNGNGNNITSFFSDENPNACRI 186
           YSR EHYS+DY Y     N +GNNITS FSDENPNACRI
Sbjct: 208 YSRTEHYSEDYYYS--RSNSDGNNITSMFSDENPNACRI 244


>ref|XP_010259440.1| PREDICTED: extensin-like [Nelumbo nucifera]
           gi|720011050|ref|XP_010259441.1| PREDICTED:
           extensin-like [Nelumbo nucifera]
          Length = 261

 Score = 56.6 bits (135), Expect = 7e-06
 Identities = 27/39 (69%), Positives = 29/39 (74%)
 Frame = -1

Query: 302 YSRPEHYSDDYDYQIRSGNGNGNNITSFFSDENPNACRI 186
           YSR EHY +DY  +   GN  GNNITS FSDENPNACRI
Sbjct: 225 YSRVEHYGEDYQSR---GNTAGNNITSMFSDENPNACRI 260


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