BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cinnamomum24_contig00028646
         (310 letters)

Database: ./nr 
           77,306,371 sequences; 28,104,191,420 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_010249185.1| PREDICTED: RNA polymerase II C-terminal doma...    67   7e-09
ref|XP_010929653.1| PREDICTED: RNA polymerase II C-terminal doma...    60   8e-07
ref|XP_010066442.1| PREDICTED: RNA polymerase II C-terminal doma...    60   8e-07
ref|XP_009386584.1| PREDICTED: RNA polymerase II C-terminal doma...    57   4e-06
ref|XP_007043830.1| RNA polymerase II C-terminal domain phosphat...    57   4e-06
ref|XP_008791049.1| PREDICTED: RNA polymerase II C-terminal doma...    57   7e-06

>ref|XP_010249185.1| PREDICTED: RNA polymerase II C-terminal domain phosphatase-like 3
           [Nelumbo nucifera]
          Length = 1313

 Score = 66.6 bits (161), Expect = 7e-09
 Identities = 40/98 (40%), Positives = 53/98 (54%), Gaps = 1/98 (1%)
 Frame = -2

Query: 303 MEKEKEGNAGSGLNSKESYNLVDNVSHDLISSKEVSLEPRLEESGGNNGYNI-SKIMKLD 127
           + +EKE   G   N K S  L +   + +  SK+  LEP   + G  +  N  S+  K  
Sbjct: 344 LNQEKEALVGVRENIKNSSILSEKAGNGVDFSKKFQLEPMPVKYGDWDNLNTRSETSKAG 403

Query: 126 QPFGPKGRGDFGPLIDLHMDYDEGSLPSPTRENPPILP 13
             FG + R  FGPL+DLH D+D  SLPSPTR+ PP LP
Sbjct: 404 LSFGSRSRIGFGPLLDLHRDHDADSLPSPTRKAPPPLP 441


>ref|XP_010929653.1| PREDICTED: RNA polymerase II C-terminal domain phosphatase-like 3
           [Elaeis guineensis]
          Length = 1268

 Score = 59.7 bits (143), Expect = 8e-07
 Identities = 38/95 (40%), Positives = 53/95 (55%)
 Frame = -2

Query: 297 KEKEGNAGSGLNSKESYNLVDNVSHDLISSKEVSLEPRLEESGGNNGYNISKIMKLDQPF 118
           KE + +AGSG N+ +  +L +    D+     VS E  L +S   +    + +  LD P 
Sbjct: 311 KESKLHAGSGTNTNDKTHLAEK--SDISPHSLVSSENSLADSSIGSKNVKAGLPNLDTPT 368

Query: 117 GPKGRGDFGPLIDLHMDYDEGSLPSPTRENPPILP 13
             +GR    PL+DLH +YDE +LPSPTREN P LP
Sbjct: 369 ISRGRM-VSPLLDLHAEYDEENLPSPTRENAPPLP 402


>ref|XP_010066442.1| PREDICTED: RNA polymerase II C-terminal domain phosphatase-like 3
           [Eucalyptus grandis] gi|629098566|gb|KCW64331.1|
           hypothetical protein EUGRSUZ_G01961 [Eucalyptus grandis]
          Length = 1256

 Score = 59.7 bits (143), Expect = 8e-07
 Identities = 42/99 (42%), Positives = 52/99 (52%), Gaps = 1/99 (1%)
 Frame = -2

Query: 300 EKEKEGNAGSGLNSKESYNLVDNVSHDLISSKEVSLEPRLEESGGNNGYNIS-KIMKLDQ 124
           EK+K  N  S    K S N     +++L  S EV  E  L ES    G  I+ K +KL  
Sbjct: 303 EKDKRFNEPSSY-PKNSENSSGIAAYNLRQSSEVHGESLLAESTDQTGRKITLKALKLGN 361

Query: 123 PFGPKGRGDFGPLIDLHMDYDEGSLPSPTRENPPILPSP 7
             G K RG   PL+DLH D+DE SLPSPT++ PP    P
Sbjct: 362 S-GAKARGMLLPLLDLHKDHDEDSLPSPTQQAPPSSRGP 399


>ref|XP_009386584.1| PREDICTED: RNA polymerase II C-terminal domain phosphatase-like 3
           [Musa acuminata subsp. malaccensis]
          Length = 1251

 Score = 57.4 bits (137), Expect = 4e-06
 Identities = 36/97 (37%), Positives = 46/97 (47%)
 Frame = -2

Query: 297 KEKEGNAGSGLNSKESYNLVDNVSHDLISSKEVSLEPRLEESGGNNGYNISKIMKLDQPF 118
           K+KE + G G N+          S  L+S  +  L P+              +  L  P 
Sbjct: 308 KKKEQHGGIGNNNLNLSKEPGVSSDGLVSLGKPYLAPKAVS-----------LPMLGLPM 356

Query: 117 GPKGRGDFGPLIDLHMDYDEGSLPSPTRENPPILPSP 7
            P+ R +F PL+DLH DYDE SLPSPTRE  P  P P
Sbjct: 357 PPRNRVEFSPLLDLHADYDEDSLPSPTRETMPRFPVP 393


>ref|XP_007043830.1| RNA polymerase II C-terminal domain phosphatase-like 3, putative
           [Theobroma cacao] gi|508707765|gb|EOX99661.1| RNA
           polymerase II C-terminal domain phosphatase-like 3,
           putative [Theobroma cacao]
          Length = 1290

 Score = 57.4 bits (137), Expect = 4e-06
 Identities = 34/98 (34%), Positives = 53/98 (54%)
 Frame = -2

Query: 306 AMEKEKEGNAGSGLNSKESYNLVDNVSHDLISSKEVSLEPRLEESGGNNGYNISKIMKLD 127
           A++ EK+     G+N K+   L +N+ HDL  + ++    +   +   N   +++ +K  
Sbjct: 328 AIDTEKDMKVVDGVNKKDPDALPENICHDLTVTNKLPSSAKFVINNKPNA--LTETLKPG 385

Query: 126 QPFGPKGRGDFGPLIDLHMDYDEGSLPSPTRENPPILP 13
            P   + RG   PL+DLH D+D  SLPSPTRE  P LP
Sbjct: 386 VP-NFRNRGISLPLLDLHKDHDADSLPSPTRETTPCLP 422


>ref|XP_008791049.1| PREDICTED: RNA polymerase II C-terminal domain phosphatase-like 3
           [Phoenix dactylifera]
          Length = 1269

 Score = 56.6 bits (135), Expect = 7e-06
 Identities = 40/98 (40%), Positives = 51/98 (52%), Gaps = 3/98 (3%)
 Frame = -2

Query: 297 KEKEGNAGSGLNSKESYNLV---DNVSHDLISSKEVSLEPRLEESGGNNGYNISKIMKLD 127
           KE +  AGSG N+ +  +L    D  S  L+SS    +   +       G     + KLD
Sbjct: 312 KESKLYAGSGTNTNDKTHLPEKPDISSFGLVSSGNSHVVSSIGSKNVQAG-----LPKLD 366

Query: 126 QPFGPKGRGDFGPLIDLHMDYDEGSLPSPTRENPPILP 13
            P   +GR    PL+DLH +YDE SLPSPTREN P LP
Sbjct: 367 TPTISRGR-IVSPLLDLHAEYDEESLPSPTRENAPPLP 403