BLASTX nr result
ID: Cinnamomum24_contig00028540
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Cinnamomum24_contig00028540
(321 letters)
Database: ./nr
77,306,371 sequences; 28,104,191,420 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|KMZ58688.1| Pentatricopeptide repeat-containing protein [Zost... 82 2e-13
ref|XP_010248045.1| PREDICTED: pentatricopeptide repeat-containi... 82 2e-13
gb|EPS60897.1| hypothetical protein M569_13903 [Genlisea aurea] 79 2e-12
emb|CBI30833.3| unnamed protein product [Vitis vinifera] 77 7e-12
ref|XP_002272240.1| PREDICTED: pentatricopeptide repeat-containi... 77 7e-12
ref|XP_007023448.1| Pentatricopeptide repeat (PPR) superfamily p... 77 7e-12
ref|XP_010091782.1| hypothetical protein L484_003842 [Morus nota... 76 1e-11
gb|ACE80804.1| pentatricopeptide repeat protein, partial [Cycas ... 75 1e-11
ref|XP_008225349.1| PREDICTED: pentatricopeptide repeat-containi... 75 2e-11
ref|XP_007212808.1| hypothetical protein PRUPE_ppa002835mg [Prun... 75 2e-11
ref|XP_012448004.1| PREDICTED: pentatricopeptide repeat-containi... 75 2e-11
ref|XP_009788200.1| PREDICTED: pentatricopeptide repeat-containi... 74 4e-11
ref|XP_009788198.1| PREDICTED: pentatricopeptide repeat-containi... 74 4e-11
ref|XP_009588648.1| PREDICTED: pentatricopeptide repeat-containi... 74 4e-11
ref|XP_009588647.1| PREDICTED: pentatricopeptide repeat-containi... 74 4e-11
emb|CAN64870.1| hypothetical protein VITISV_041329 [Vitis vinifera] 74 4e-11
ref|XP_011462686.1| PREDICTED: pentatricopeptide repeat-containi... 73 7e-11
gb|AEW07759.1| hypothetical protein 0_10928_02, partial [Pinus r... 73 7e-11
gb|AFG65812.1| hypothetical protein 2_9455_01, partial [Pinus ta... 73 9e-11
gb|AFG65809.1| hypothetical protein 2_9455_01, partial [Pinus ta... 73 9e-11
>gb|KMZ58688.1| Pentatricopeptide repeat-containing protein [Zostera marina]
Length = 615
Score = 82.0 bits (201), Expect = 2e-13
Identities = 34/52 (65%), Positives = 45/52 (86%)
Frame = -3
Query: 319 NVRKLPGCSWIELNTGVHTFVNGDWTHPDSEGIYAELQALIGQLREYGYVPD 164
NVRK+PGCSW+EL TG+HTF++ D +HP+S+ IY+ L+ LIG+LRE GYVPD
Sbjct: 559 NVRKIPGCSWMELKTGMHTFISRDISHPESDQIYSMLEVLIGRLRELGYVPD 610
>ref|XP_010248045.1| PREDICTED: pentatricopeptide repeat-containing protein At3g14730
[Nelumbo nucifera]
Length = 645
Score = 82.0 bits (201), Expect = 2e-13
Identities = 36/56 (64%), Positives = 43/56 (76%)
Frame = -3
Query: 319 NVRKLPGCSWIELNTGVHTFVNGDWTHPDSEGIYAELQALIGQLREYGYVPDARHI 152
NV+K PGCSWIEL GVH FV GD HP+S+ I+AEL AL G LREYGYVP+ ++
Sbjct: 584 NVKKTPGCSWIELKFGVHVFVTGDRMHPESDRIHAELDALTGCLREYGYVPEVSYV 639
>gb|EPS60897.1| hypothetical protein M569_13903 [Genlisea aurea]
Length = 650
Score = 78.6 bits (192), Expect = 2e-12
Identities = 31/59 (52%), Positives = 46/59 (77%)
Frame = -3
Query: 316 VRKLPGCSWIELNTGVHTFVNGDWTHPDSEGIYAELQALIGQLREYGYVPDARHILPDM 140
+ K PGCSWIE+N VHTF++GD +HP+++ ++AEL+ +G+LRE GYVPD +L D+
Sbjct: 511 ITKQPGCSWIEVNRLVHTFISGDTSHPEADAVHAELKRTVGRLREIGYVPDTNFVLHDV 569
>emb|CBI30833.3| unnamed protein product [Vitis vinifera]
Length = 709
Score = 76.6 bits (187), Expect = 7e-12
Identities = 33/52 (63%), Positives = 39/52 (75%)
Frame = -3
Query: 319 NVRKLPGCSWIELNTGVHTFVNGDWTHPDSEGIYAELQALIGQLREYGYVPD 164
NVRK PGCSWIEL GVH FV+ D HP++ IYA L +L +LRE+GYVPD
Sbjct: 577 NVRKTPGCSWIELKNGVHVFVSADRAHPEAHSIYAGLNSLTARLREHGYVPD 628
>ref|XP_002272240.1| PREDICTED: pentatricopeptide repeat-containing protein At3g14730
[Vitis vinifera]
Length = 629
Score = 76.6 bits (187), Expect = 7e-12
Identities = 33/52 (63%), Positives = 39/52 (75%)
Frame = -3
Query: 319 NVRKLPGCSWIELNTGVHTFVNGDWTHPDSEGIYAELQALIGQLREYGYVPD 164
NVRK PGCSWIEL GVH FV+ D HP++ IYA L +L +LRE+GYVPD
Sbjct: 577 NVRKTPGCSWIELKNGVHVFVSADRAHPEAHSIYAGLNSLTARLREHGYVPD 628
>ref|XP_007023448.1| Pentatricopeptide repeat (PPR) superfamily protein, putative
[Theobroma cacao] gi|508778814|gb|EOY26070.1|
Pentatricopeptide repeat (PPR) superfamily protein,
putative [Theobroma cacao]
Length = 643
Score = 76.6 bits (187), Expect = 7e-12
Identities = 34/52 (65%), Positives = 37/52 (71%)
Frame = -3
Query: 319 NVRKLPGCSWIELNTGVHTFVNGDWTHPDSEGIYAELQALIGQLREYGYVPD 164
NVRKLPGCSWIEL GVH F+NGD THP S IY L +L L E+ YVPD
Sbjct: 591 NVRKLPGCSWIELKNGVHAFINGDCTHPGSSSIYDGLHSLTALLHEHDYVPD 642
>ref|XP_010091782.1| hypothetical protein L484_003842 [Morus notabilis]
gi|587855763|gb|EXB45758.1| hypothetical protein
L484_003842 [Morus notabilis]
Length = 633
Score = 75.9 bits (185), Expect = 1e-11
Identities = 33/52 (63%), Positives = 40/52 (76%)
Frame = -3
Query: 319 NVRKLPGCSWIELNTGVHTFVNGDWTHPDSEGIYAELQALIGQLREYGYVPD 164
NV+K PGCSWIEL GVHTF+ D HPD+ IYAEL +L +LRE+GYVP+
Sbjct: 581 NVKKTPGCSWIELKDGVHTFITADRVHPDASLIYAELNSLTVRLREHGYVPN 632
>gb|ACE80804.1| pentatricopeptide repeat protein, partial [Cycas revoluta]
Length = 152
Score = 75.5 bits (184), Expect = 1e-11
Identities = 31/59 (52%), Positives = 45/59 (76%)
Frame = -3
Query: 316 VRKLPGCSWIELNTGVHTFVNGDWTHPDSEGIYAELQALIGQLREYGYVPDARHILPDM 140
V+K+PGCSWIE+N VH F+ GD +HP ++ IYAEL+ L GQ++E GY+P+ +L D+
Sbjct: 21 VKKIPGCSWIEVNNKVHAFLVGDTSHPQAQKIYAELERLSGQMKEGGYLPNTNFVLHDV 79
>ref|XP_008225349.1| PREDICTED: pentatricopeptide repeat-containing protein At3g14730
[Prunus mume]
Length = 629
Score = 75.1 bits (183), Expect = 2e-11
Identities = 32/51 (62%), Positives = 38/51 (74%)
Frame = -3
Query: 319 NVRKLPGCSWIELNTGVHTFVNGDWTHPDSEGIYAELQALIGQLREYGYVP 167
NV+K PGCSWIEL GVH F+ GD HP + IYAEL +L +LRE+GYVP
Sbjct: 577 NVKKTPGCSWIELKNGVHAFITGDRAHPKANFIYAELDSLTARLREHGYVP 627
>ref|XP_007212808.1| hypothetical protein PRUPE_ppa002835mg [Prunus persica]
gi|462408673|gb|EMJ14007.1| hypothetical protein
PRUPE_ppa002835mg [Prunus persica]
Length = 629
Score = 75.1 bits (183), Expect = 2e-11
Identities = 32/51 (62%), Positives = 38/51 (74%)
Frame = -3
Query: 319 NVRKLPGCSWIELNTGVHTFVNGDWTHPDSEGIYAELQALIGQLREYGYVP 167
NV+K PGCSWIEL GVH F+ GD HP + IYAEL +L +LRE+GYVP
Sbjct: 577 NVKKTPGCSWIELKNGVHAFITGDRAHPKANFIYAELDSLTARLREHGYVP 627
>ref|XP_012448004.1| PREDICTED: pentatricopeptide repeat-containing protein At3g14730
[Gossypium raimondii] gi|763789515|gb|KJB56511.1|
hypothetical protein B456_009G123200 [Gossypium
raimondii]
Length = 641
Score = 74.7 bits (182), Expect = 2e-11
Identities = 32/52 (61%), Positives = 37/52 (71%)
Frame = -3
Query: 319 NVRKLPGCSWIELNTGVHTFVNGDWTHPDSEGIYAELQALIGQLREYGYVPD 164
NVRKLPGCSWIE+ G+H F+NGD THP S IY L +L L E+ YVPD
Sbjct: 589 NVRKLPGCSWIEVKNGIHAFINGDRTHPGSNSIYDGLHSLTALLHEHDYVPD 640
>ref|XP_009788200.1| PREDICTED: pentatricopeptide repeat-containing protein At3g14730
isoform X3 [Nicotiana sylvestris]
Length = 510
Score = 73.9 bits (180), Expect = 4e-11
Identities = 31/53 (58%), Positives = 39/53 (73%)
Frame = -3
Query: 319 NVRKLPGCSWIELNTGVHTFVNGDWTHPDSEGIYAELQALIGQLREYGYVPDA 161
NVRK PGCSWIELN GVH F+ D +HP+ IYA L +L +LRE+GY P++
Sbjct: 451 NVRKTPGCSWIELNNGVHVFITADKSHPEGNLIYAGLNSLTARLREHGYTPES 503
>ref|XP_009788198.1| PREDICTED: pentatricopeptide repeat-containing protein At3g14730
isoform X1 [Nicotiana sylvestris]
gi|698482590|ref|XP_009788199.1| PREDICTED:
pentatricopeptide repeat-containing protein At3g14730
isoform X2 [Nicotiana sylvestris]
Length = 637
Score = 73.9 bits (180), Expect = 4e-11
Identities = 31/53 (58%), Positives = 39/53 (73%)
Frame = -3
Query: 319 NVRKLPGCSWIELNTGVHTFVNGDWTHPDSEGIYAELQALIGQLREYGYVPDA 161
NVRK PGCSWIELN GVH F+ D +HP+ IYA L +L +LRE+GY P++
Sbjct: 578 NVRKTPGCSWIELNNGVHVFITADKSHPEGNLIYAGLNSLTARLREHGYTPES 630
>ref|XP_009588648.1| PREDICTED: pentatricopeptide repeat-containing protein At3g14730
isoform X2 [Nicotiana tomentosiformis]
Length = 510
Score = 73.9 bits (180), Expect = 4e-11
Identities = 31/53 (58%), Positives = 39/53 (73%)
Frame = -3
Query: 319 NVRKLPGCSWIELNTGVHTFVNGDWTHPDSEGIYAELQALIGQLREYGYVPDA 161
NVRK PGCSWIELN GVH F+ D +HP+ IYA L +L +LRE+GY P++
Sbjct: 451 NVRKTPGCSWIELNNGVHVFITADKSHPEGNLIYAGLNSLTARLREHGYTPES 503
>ref|XP_009588647.1| PREDICTED: pentatricopeptide repeat-containing protein At3g14730
isoform X1 [Nicotiana tomentosiformis]
Length = 637
Score = 73.9 bits (180), Expect = 4e-11
Identities = 31/53 (58%), Positives = 39/53 (73%)
Frame = -3
Query: 319 NVRKLPGCSWIELNTGVHTFVNGDWTHPDSEGIYAELQALIGQLREYGYVPDA 161
NVRK PGCSWIELN GVH F+ D +HP+ IYA L +L +LRE+GY P++
Sbjct: 578 NVRKTPGCSWIELNNGVHVFITADKSHPEGNLIYAGLNSLTARLREHGYTPES 630
>emb|CAN64870.1| hypothetical protein VITISV_041329 [Vitis vinifera]
Length = 629
Score = 73.9 bits (180), Expect = 4e-11
Identities = 32/52 (61%), Positives = 38/52 (73%)
Frame = -3
Query: 319 NVRKLPGCSWIELNTGVHTFVNGDWTHPDSEGIYAELQALIGQLREYGYVPD 164
NVRK PGCSWIEL GVH FV+ D HP++ IYA L +L +L E+GYVPD
Sbjct: 577 NVRKTPGCSWIELKNGVHVFVSADRAHPEAXSIYAGLNSLTARLXEHGYVPD 628
>ref|XP_011462686.1| PREDICTED: pentatricopeptide repeat-containing protein At3g14730
[Fragaria vesca subsp. vesca]
Length = 630
Score = 73.2 bits (178), Expect = 7e-11
Identities = 31/51 (60%), Positives = 39/51 (76%)
Frame = -3
Query: 319 NVRKLPGCSWIELNTGVHTFVNGDWTHPDSEGIYAELQALIGQLREYGYVP 167
NV+K PGCSW EL G+H FVNGD +HP + IYA+L +L +LRE+GYVP
Sbjct: 578 NVQKAPGCSWTELKDGMHAFVNGDRSHPKANFIYAQLDSLTARLREHGYVP 628
>gb|AEW07759.1| hypothetical protein 0_10928_02, partial [Pinus radiata]
gi|383165614|gb|AFG65694.1| hypothetical protein
0_10928_02, partial [Pinus taeda]
gi|383165616|gb|AFG65695.1| hypothetical protein
0_10928_02, partial [Pinus taeda]
gi|383165618|gb|AFG65696.1| hypothetical protein
0_10928_02, partial [Pinus taeda]
gi|383165620|gb|AFG65697.1| hypothetical protein
0_10928_02, partial [Pinus taeda]
gi|383165622|gb|AFG65698.1| hypothetical protein
0_10928_02, partial [Pinus taeda]
gi|383165624|gb|AFG65699.1| hypothetical protein
0_10928_02, partial [Pinus taeda]
gi|383165628|gb|AFG65701.1| hypothetical protein
0_10928_02, partial [Pinus taeda]
gi|383165630|gb|AFG65702.1| hypothetical protein
0_10928_02, partial [Pinus taeda]
gi|383165634|gb|AFG65704.1| hypothetical protein
0_10928_02, partial [Pinus taeda]
gi|383165636|gb|AFG65705.1| hypothetical protein
0_10928_02, partial [Pinus taeda]
gi|383165638|gb|AFG65706.1| hypothetical protein
0_10928_02, partial [Pinus taeda]
gi|383165640|gb|AFG65707.1| hypothetical protein
0_10928_02, partial [Pinus taeda]
gi|383165642|gb|AFG65708.1| hypothetical protein
0_10928_02, partial [Pinus taeda]
gi|383165644|gb|AFG65709.1| hypothetical protein
0_10928_02, partial [Pinus taeda]
Length = 61
Score = 73.2 bits (178), Expect = 7e-11
Identities = 32/58 (55%), Positives = 41/58 (70%)
Frame = -3
Query: 316 VRKLPGCSWIELNTGVHTFVNGDWTHPDSEGIYAELQALIGQLREYGYVPDARHILPD 143
V+K PGCSWIE+ VH FV GD +HP +E IY +L LI Q+RE GYVP+ + +L D
Sbjct: 2 VKKEPGCSWIEVRNKVHVFVVGDRSHPQTEAIYQKLDELISQMREAGYVPNTKFVLQD 59
>gb|AFG65812.1| hypothetical protein 2_9455_01, partial [Pinus taeda]
gi|383165818|gb|AFG65813.1| hypothetical protein
2_9455_01, partial [Pinus taeda]
Length = 156
Score = 72.8 bits (177), Expect = 9e-11
Identities = 31/59 (52%), Positives = 43/59 (72%)
Frame = -3
Query: 316 VRKLPGCSWIELNTGVHTFVNGDWTHPDSEGIYAELQALIGQLREYGYVPDARHILPDM 140
++K PGCSWIE+N +H+FV GD +HP +E IY L AL GQ++E GY+PD +L D+
Sbjct: 18 LKKQPGCSWIEVNNKMHSFVVGDTSHPQTEEIYTLLDALAGQMKEAGYLPDTDFVLHDV 76
>gb|AFG65809.1| hypothetical protein 2_9455_01, partial [Pinus taeda]
Length = 156
Score = 72.8 bits (177), Expect = 9e-11
Identities = 31/59 (52%), Positives = 43/59 (72%)
Frame = -3
Query: 316 VRKLPGCSWIELNTGVHTFVNGDWTHPDSEGIYAELQALIGQLREYGYVPDARHILPDM 140
++K PGCSWIE+N +H+FV GD +HP +E IY L AL GQ++E GY+PD +L D+
Sbjct: 18 LKKQPGCSWIEVNNKMHSFVVGDTSHPQTEEIYTLLDALAGQMKEAGYLPDTDFVLHDV 76