BLASTX nr result
ID: Cinnamomum24_contig00028184
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Cinnamomum24_contig00028184
(409 letters)
Database: ./nr
77,306,371 sequences; 28,104,191,420 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_010251272.1| PREDICTED: DNA-directed RNA polymerase III s... 150 3e-34
ref|XP_010662743.1| PREDICTED: DNA-directed RNA polymerase III s... 141 2e-31
ref|XP_010662742.1| PREDICTED: DNA-directed RNA polymerase III s... 141 2e-31
emb|CAN62168.1| hypothetical protein VITISV_005985 [Vitis vinifera] 141 2e-31
ref|XP_009406215.1| PREDICTED: uncharacterized protein LOC103989... 118 2e-24
ref|XP_008793122.1| PREDICTED: uncharacterized protein LOC103709... 117 3e-24
ref|XP_008793120.1| PREDICTED: uncharacterized protein LOC103709... 117 3e-24
ref|XP_008793119.1| PREDICTED: uncharacterized protein LOC103709... 117 3e-24
ref|XP_006859054.1| PREDICTED: DNA-directed RNA polymerase III s... 115 1e-23
ref|XP_010924543.1| PREDICTED: DNA-directed RNA polymerase III s... 115 1e-23
ref|XP_008234241.1| PREDICTED: DNA-directed RNA polymerase III s... 110 4e-22
ref|XP_008234240.1| PREDICTED: DNA-directed RNA polymerase III s... 110 4e-22
ref|XP_008234239.1| PREDICTED: DNA-directed RNA polymerase III s... 110 4e-22
ref|XP_008234238.1| PREDICTED: DNA-directed RNA polymerase III s... 110 4e-22
ref|XP_009342965.1| PREDICTED: DNA-directed RNA polymerase III s... 110 5e-22
ref|XP_008376589.1| PREDICTED: DNA-directed RNA polymerase III s... 107 3e-21
ref|XP_008377566.1| PREDICTED: DNA-directed RNA polymerase III s... 105 2e-20
ref|XP_009340033.1| PREDICTED: DNA-directed RNA polymerase III s... 104 2e-20
ref|XP_010108344.1| DNA-directed RNA polymerase III subunit RPC3... 103 5e-20
ref|XP_008377560.1| PREDICTED: DNA-directed RNA polymerase III s... 100 5e-19
>ref|XP_010251272.1| PREDICTED: DNA-directed RNA polymerase III subunit RPC3 [Nelumbo
nucifera]
Length = 531
Score = 150 bits (380), Expect = 3e-34
Identities = 81/135 (60%), Positives = 95/135 (70%), Gaps = 2/135 (1%)
Frame = +3
Query: 6 ELLTIEKRAITAAAPSHSERFSVIVDIGSDIDV--KNNQRCSSATAGEKRKYEALEMDNE 179
E+ T+EKRAI+AAAP SERF+VI D G+D+ ++ R GEKRK+EALEMD E
Sbjct: 195 EIETLEKRAISAAAPLESERFAVITDTGTDVKSGDRSGSRFLDTAIGEKRKHEALEMDRE 254
Query: 180 TMAAICEKEVLWRANFEEFVRCLRHKACVANVRSKLDVKTGTVLEAILEATRXXXXXXXX 359
TMA ICEKEVLWRANFE F+R LRHKACVANVR+++D TVL A+LEATR
Sbjct: 255 TMATICEKEVLWRANFEAFIRRLRHKACVANVRARMDDGACTVLNAMLEATRNAESRIKT 314
Query: 360 XXXXPLSMDTILQEV 404
PLSMD IL EV
Sbjct: 315 ENSVPLSMDAILAEV 329
>ref|XP_010662743.1| PREDICTED: DNA-directed RNA polymerase III subunit RPC3 isoform X2
[Vitis vinifera]
Length = 429
Score = 141 bits (356), Expect = 2e-31
Identities = 76/130 (58%), Positives = 93/130 (71%)
Frame = +3
Query: 15 TIEKRAITAAAPSHSERFSVIVDIGSDIDVKNNQRCSSATAGEKRKYEALEMDNETMAAI 194
TIE+RAI AAAP ++RFSVI++ G+D+D N TAGEKRK +ALE+D ET A+
Sbjct: 199 TIEQRAIAAAAPMDAKRFSVIINTGTDVDDSPN-----VTAGEKRKQDALELDKETGAS- 252
Query: 195 CEKEVLWRANFEEFVRCLRHKACVANVRSKLDVKTGTVLEAILEATRXXXXXXXXXXXXP 374
CEK+VLWRANFEEFVRCLRHKAC+ANV+++LD VL A+LEATR P
Sbjct: 253 CEKDVLWRANFEEFVRCLRHKACIANVKTRLDDGAAIVLSAMLEATRSEEKKVKTENSVP 312
Query: 375 LSMDTILQEV 404
LSMDTI + V
Sbjct: 313 LSMDTIFEGV 322
>ref|XP_010662742.1| PREDICTED: DNA-directed RNA polymerase III subunit RPC3 isoform X1
[Vitis vinifera] gi|302143859|emb|CBI22720.3| unnamed
protein product [Vitis vinifera]
Length = 524
Score = 141 bits (356), Expect = 2e-31
Identities = 76/130 (58%), Positives = 93/130 (71%)
Frame = +3
Query: 15 TIEKRAITAAAPSHSERFSVIVDIGSDIDVKNNQRCSSATAGEKRKYEALEMDNETMAAI 194
TIE+RAI AAAP ++RFSVI++ G+D+D N TAGEKRK +ALE+D ET A+
Sbjct: 199 TIEQRAIAAAAPMDAKRFSVIINTGTDVDDSPN-----VTAGEKRKQDALELDKETGAS- 252
Query: 195 CEKEVLWRANFEEFVRCLRHKACVANVRSKLDVKTGTVLEAILEATRXXXXXXXXXXXXP 374
CEK+VLWRANFEEFVRCLRHKAC+ANV+++LD VL A+LEATR P
Sbjct: 253 CEKDVLWRANFEEFVRCLRHKACIANVKTRLDDGAAIVLSAMLEATRSEEKKVKTENSVP 312
Query: 375 LSMDTILQEV 404
LSMDTI + V
Sbjct: 313 LSMDTIFEGV 322
>emb|CAN62168.1| hypothetical protein VITISV_005985 [Vitis vinifera]
Length = 721
Score = 141 bits (356), Expect = 2e-31
Identities = 76/130 (58%), Positives = 93/130 (71%)
Frame = +3
Query: 15 TIEKRAITAAAPSHSERFSVIVDIGSDIDVKNNQRCSSATAGEKRKYEALEMDNETMAAI 194
TIE+RAI AAAP ++RFSVI++ G+D+D N TAGEKRK +ALE+D ET A+
Sbjct: 293 TIEQRAIAAAAPMDAKRFSVIINTGTDVDDSPN-----VTAGEKRKQDALELDKETGAS- 346
Query: 195 CEKEVLWRANFEEFVRCLRHKACVANVRSKLDVKTGTVLEAILEATRXXXXXXXXXXXXP 374
CEK+VLWRANFEEFVRCLRHKAC+ANV+++LD VL A+LEATR P
Sbjct: 347 CEKDVLWRANFEEFVRCLRHKACIANVKTRLDDGAAIVLSAMLEATRSEEKKVKTENSVP 406
Query: 375 LSMDTILQEV 404
LSMDTI + V
Sbjct: 407 LSMDTIFEGV 416
>ref|XP_009406215.1| PREDICTED: uncharacterized protein LOC103989158 [Musa acuminata
subsp. malaccensis]
Length = 516
Score = 118 bits (295), Expect = 2e-24
Identities = 67/135 (49%), Positives = 89/135 (65%), Gaps = 1/135 (0%)
Frame = +3
Query: 6 ELLTIEKRAITAAAPSHSERFSVIVDIGSDI-DVKNNQRCSSATAGEKRKYEALEMDNET 182
E ++E++A+ AAA SH+ERFSVI D G + DVK+ + + G+KRK+E LE+D E
Sbjct: 194 ETYSLEQQAMIAAALSHAERFSVITDSGRESSDVKDADK-QDVSVGDKRKFEVLELDEEV 252
Query: 183 MAAICEKEVLWRANFEEFVRCLRHKACVANVRSKLDVKTGTVLEAILEATRXXXXXXXXX 362
AAI E EVLWRANF++FV CL KACVANVRS+L + G VLEA++E++
Sbjct: 253 QAAITETEVLWRANFQKFVHCLEKKACVANVRSRLGLDAGVVLEALVESS-----DQEKD 307
Query: 363 XXXPLSMDTILQEVR 407
SMD IL+ VR
Sbjct: 308 NFVKASMDGILEAVR 322
>ref|XP_008793122.1| PREDICTED: uncharacterized protein LOC103709507 isoform X3 [Phoenix
dactylifera]
Length = 416
Score = 117 bits (293), Expect = 3e-24
Identities = 65/135 (48%), Positives = 90/135 (66%), Gaps = 1/135 (0%)
Frame = +3
Query: 6 ELLTIEKRAITAAAPSHSERFSVIVDIGSD-IDVKNNQRCSSATAGEKRKYEALEMDNET 182
E+L+IE+RA+ AAA S +ERFS I D ++ I+VK S + G+KRKY ALEMD E
Sbjct: 194 EILSIEQRAMVAAALSDAERFSEITDTATETIEVKATDHSSDVSVGDKRKYGALEMDQEV 253
Query: 183 MAAICEKEVLWRANFEEFVRCLRHKACVANVRSKLDVKTGTVLEAILEATRXXXXXXXXX 362
AAI + EVLW+ANFE+F+ CL+ KACVA+VRS+ + G VLEA++E++
Sbjct: 254 QAAITQNEVLWQANFEKFLLCLKKKACVAHVRSRFGLDAGAVLEAMIESS--GQQKAKDE 311
Query: 363 XXXPLSMDTILQEVR 407
+MD+IL+ VR
Sbjct: 312 TPVRATMDSILEGVR 326
>ref|XP_008793120.1| PREDICTED: uncharacterized protein LOC103709507 isoform X2 [Phoenix
dactylifera]
Length = 437
Score = 117 bits (293), Expect = 3e-24
Identities = 65/135 (48%), Positives = 90/135 (66%), Gaps = 1/135 (0%)
Frame = +3
Query: 6 ELLTIEKRAITAAAPSHSERFSVIVDIGSD-IDVKNNQRCSSATAGEKRKYEALEMDNET 182
E+L+IE+RA+ AAA S +ERFS I D ++ I+VK S + G+KRKY ALEMD E
Sbjct: 194 EILSIEQRAMVAAALSDAERFSEITDTATETIEVKATDHSSDVSVGDKRKYGALEMDQEV 253
Query: 183 MAAICEKEVLWRANFEEFVRCLRHKACVANVRSKLDVKTGTVLEAILEATRXXXXXXXXX 362
AAI + EVLW+ANFE+F+ CL+ KACVA+VRS+ + G VLEA++E++
Sbjct: 254 QAAITQNEVLWQANFEKFLLCLKKKACVAHVRSRFGLDAGAVLEAMIESS--GQQKAKDE 311
Query: 363 XXXPLSMDTILQEVR 407
+MD+IL+ VR
Sbjct: 312 TPVRATMDSILEGVR 326
>ref|XP_008793119.1| PREDICTED: uncharacterized protein LOC103709507 isoform X1 [Phoenix
dactylifera]
Length = 518
Score = 117 bits (293), Expect = 3e-24
Identities = 65/135 (48%), Positives = 90/135 (66%), Gaps = 1/135 (0%)
Frame = +3
Query: 6 ELLTIEKRAITAAAPSHSERFSVIVDIGSD-IDVKNNQRCSSATAGEKRKYEALEMDNET 182
E+L+IE+RA+ AAA S +ERFS I D ++ I+VK S + G+KRKY ALEMD E
Sbjct: 194 EILSIEQRAMVAAALSDAERFSEITDTATETIEVKATDHSSDVSVGDKRKYGALEMDQEV 253
Query: 183 MAAICEKEVLWRANFEEFVRCLRHKACVANVRSKLDVKTGTVLEAILEATRXXXXXXXXX 362
AAI + EVLW+ANFE+F+ CL+ KACVA+VRS+ + G VLEA++E++
Sbjct: 254 QAAITQNEVLWQANFEKFLLCLKKKACVAHVRSRFGLDAGAVLEAMIESS--GQQKAKDE 311
Query: 363 XXXPLSMDTILQEVR 407
+MD+IL+ VR
Sbjct: 312 TPVRATMDSILEGVR 326
>ref|XP_006859054.1| PREDICTED: DNA-directed RNA polymerase III subunit RPC3 [Amborella
trichopoda] gi|548863166|gb|ERN20521.1| hypothetical
protein AMTR_s00068p00192690 [Amborella trichopoda]
Length = 515
Score = 115 bits (289), Expect = 1e-23
Identities = 62/132 (46%), Positives = 83/132 (62%), Gaps = 1/132 (0%)
Frame = +3
Query: 6 ELLTIEKRAITAAAPSHSERFSVIVDIGSDIDVKNNQRCS-SATAGEKRKYEALEMDNET 182
E++T E+RA+ AAAP +ERFS +D ++ S GEKRK +EMD+++
Sbjct: 187 EIVTDEERAVMAAAPLEAERFSFPTYSDNDASTESEIMADQSILVGEKRKRGVMEMDDDS 246
Query: 183 MAAICEKEVLWRANFEEFVRCLRHKACVANVRSKLDVKTGTVLEAILEATRXXXXXXXXX 362
+ CEK+VLWRANFEEFV LRHKAC+ANVR +LD+ VLEAIL+ TR
Sbjct: 247 IVLACEKDVLWRANFEEFVCSLRHKACIANVRPRLDIGAAVVLEAILKETRAKEKQNKAE 306
Query: 363 XXXPLSMDTILQ 398
P SM++I+Q
Sbjct: 307 YSAPFSMNSIVQ 318
>ref|XP_010924543.1| PREDICTED: DNA-directed RNA polymerase III subunit rpc3 [Elaeis
guineensis]
Length = 518
Score = 115 bits (288), Expect = 1e-23
Identities = 64/135 (47%), Positives = 88/135 (65%), Gaps = 1/135 (0%)
Frame = +3
Query: 6 ELLTIEKRAITAAAPSHSERFSVIVDIGSD-IDVKNNQRCSSATAGEKRKYEALEMDNET 182
E+L++E++A+ AAA S +ERFS I D ++ I+VK + G+KRKY LEMD E
Sbjct: 194 EMLSVEQQAMVAAALSDAERFSEITDTSTENIEVKATDHDPDVSVGDKRKYGVLEMDQEV 253
Query: 183 MAAICEKEVLWRANFEEFVRCLRHKACVANVRSKLDVKTGTVLEAILEATRXXXXXXXXX 362
A I E EVLWRANFE+F+ CL+ KACVA+VRSKL + G VLEA++E++
Sbjct: 254 QAVIAENEVLWRANFEKFLLCLKKKACVAHVRSKLGLDAGVVLEAMIESS--GQQKAKDE 311
Query: 363 XXXPLSMDTILQEVR 407
+MD+IL+ VR
Sbjct: 312 TPVRATMDSILEGVR 326
>ref|XP_008234241.1| PREDICTED: DNA-directed RNA polymerase III subunit rpc3 isoform X4
[Prunus mume]
Length = 431
Score = 110 bits (275), Expect = 4e-22
Identities = 61/130 (46%), Positives = 83/130 (63%)
Frame = +3
Query: 15 TIEKRAITAAAPSHSERFSVIVDIGSDIDVKNNQRCSSATAGEKRKYEALEMDNETMAAI 194
TIE+R I AAAP + RFS+++D +D + + + GEKRK+ LE D E +
Sbjct: 195 TIEQRVIAAAAPPEAIRFSIMIDSEADAC---GGKSDNMSVGEKRKHATLEFDAEFGSK- 250
Query: 195 CEKEVLWRANFEEFVRCLRHKACVANVRSKLDVKTGTVLEAILEATRXXXXXXXXXXXXP 374
++ VLWRANFEEF+RCLRHKACV NVR++LD + VL A+L+ATR P
Sbjct: 251 -DEVVLWRANFEEFIRCLRHKACVENVRARLDDEAAVVLRAMLKATRTAEKKVKTENSVP 309
Query: 375 LSMDTILQEV 404
LS++TI +EV
Sbjct: 310 LSLNTIYEEV 319
>ref|XP_008234240.1| PREDICTED: DNA-directed RNA polymerase III subunit rpc3 isoform X3
[Prunus mume]
Length = 502
Score = 110 bits (275), Expect = 4e-22
Identities = 61/130 (46%), Positives = 83/130 (63%)
Frame = +3
Query: 15 TIEKRAITAAAPSHSERFSVIVDIGSDIDVKNNQRCSSATAGEKRKYEALEMDNETMAAI 194
TIE+R I AAAP + RFS+++D +D + + + GEKRK+ LE D E +
Sbjct: 171 TIEQRVIAAAAPPEAIRFSIMIDSEADAC---GGKSDNMSVGEKRKHATLEFDAEFGSK- 226
Query: 195 CEKEVLWRANFEEFVRCLRHKACVANVRSKLDVKTGTVLEAILEATRXXXXXXXXXXXXP 374
++ VLWRANFEEF+RCLRHKACV NVR++LD + VL A+L+ATR P
Sbjct: 227 -DEVVLWRANFEEFIRCLRHKACVENVRARLDDEAAVVLRAMLKATRTAEKKVKTENSVP 285
Query: 375 LSMDTILQEV 404
LS++TI +EV
Sbjct: 286 LSLNTIYEEV 295
>ref|XP_008234239.1| PREDICTED: DNA-directed RNA polymerase III subunit rpc3 isoform X2
[Prunus mume]
Length = 522
Score = 110 bits (275), Expect = 4e-22
Identities = 61/130 (46%), Positives = 83/130 (63%)
Frame = +3
Query: 15 TIEKRAITAAAPSHSERFSVIVDIGSDIDVKNNQRCSSATAGEKRKYEALEMDNETMAAI 194
TIE+R I AAAP + RFS+++D +D + + + GEKRK+ LE D E +
Sbjct: 191 TIEQRVIAAAAPPEAIRFSIMIDSEADAC---GGKSDNMSVGEKRKHATLEFDAEFGSK- 246
Query: 195 CEKEVLWRANFEEFVRCLRHKACVANVRSKLDVKTGTVLEAILEATRXXXXXXXXXXXXP 374
++ VLWRANFEEF+RCLRHKACV NVR++LD + VL A+L+ATR P
Sbjct: 247 -DEVVLWRANFEEFIRCLRHKACVENVRARLDDEAAVVLRAMLKATRTAEKKVKTENSVP 305
Query: 375 LSMDTILQEV 404
LS++TI +EV
Sbjct: 306 LSLNTIYEEV 315
>ref|XP_008234238.1| PREDICTED: DNA-directed RNA polymerase III subunit rpc3 isoform X1
[Prunus mume]
Length = 526
Score = 110 bits (275), Expect = 4e-22
Identities = 61/130 (46%), Positives = 83/130 (63%)
Frame = +3
Query: 15 TIEKRAITAAAPSHSERFSVIVDIGSDIDVKNNQRCSSATAGEKRKYEALEMDNETMAAI 194
TIE+R I AAAP + RFS+++D +D + + + GEKRK+ LE D E +
Sbjct: 195 TIEQRVIAAAAPPEAIRFSIMIDSEADAC---GGKSDNMSVGEKRKHATLEFDAEFGSK- 250
Query: 195 CEKEVLWRANFEEFVRCLRHKACVANVRSKLDVKTGTVLEAILEATRXXXXXXXXXXXXP 374
++ VLWRANFEEF+RCLRHKACV NVR++LD + VL A+L+ATR P
Sbjct: 251 -DEVVLWRANFEEFIRCLRHKACVENVRARLDDEAAVVLRAMLKATRTAEKKVKTENSVP 309
Query: 375 LSMDTILQEV 404
LS++TI +EV
Sbjct: 310 LSLNTIYEEV 319
>ref|XP_009342965.1| PREDICTED: DNA-directed RNA polymerase III subunit RPC3-like [Pyrus
x bretschneideri] gi|694431042|ref|XP_009342966.1|
PREDICTED: DNA-directed RNA polymerase III subunit
RPC3-like [Pyrus x bretschneideri]
Length = 509
Score = 110 bits (274), Expect = 5e-22
Identities = 60/130 (46%), Positives = 82/130 (63%)
Frame = +3
Query: 15 TIEKRAITAAAPSHSERFSVIVDIGSDIDVKNNQRCSSATAGEKRKYEALEMDNETMAAI 194
TIE+R + AAAPS + RFS++ D +D + SS + G+KRK++ALE+D E
Sbjct: 185 TIEQRVVAAAAPSAAMRFSILTDSETDA---HGGSSSSMSTGDKRKHDALELDEEFAN-- 239
Query: 195 CEKEVLWRANFEEFVRCLRHKACVANVRSKLDVKTGTVLEAILEATRXXXXXXXXXXXXP 374
+ V+WRANFEEF+RCLRHKACV NVR++LD VL A+L++TR P
Sbjct: 240 -NEVVIWRANFEEFIRCLRHKACVENVRARLDDGAALVLRAMLKSTRTAEKKVKMENSVP 298
Query: 375 LSMDTILQEV 404
+S TI +EV
Sbjct: 299 VSFSTIYEEV 308
>ref|XP_008376589.1| PREDICTED: DNA-directed RNA polymerase III subunit RPC3-like [Malus
domestica]
Length = 508
Score = 107 bits (267), Expect = 3e-21
Identities = 59/130 (45%), Positives = 80/130 (61%)
Frame = +3
Query: 15 TIEKRAITAAAPSHSERFSVIVDIGSDIDVKNNQRCSSATAGEKRKYEALEMDNETMAAI 194
TIE+R + AAPS + RFS++ D +D + SS + G+KRK++ALE+D +
Sbjct: 185 TIEQRVVAVAAPSAAMRFSILTDSETDA---HGGSSSSMSTGDKRKHDALELDEFANNEV 241
Query: 195 CEKEVLWRANFEEFVRCLRHKACVANVRSKLDVKTGTVLEAILEATRXXXXXXXXXXXXP 374
VLWRANFEEF+RCLRHKACV NVR++LD VL A+L++TR P
Sbjct: 242 ----VLWRANFEEFIRCLRHKACVENVRARLDDGAALVLRAMLKSTRTAEKKVKTENSVP 297
Query: 375 LSMDTILQEV 404
+S TI +EV
Sbjct: 298 VSFSTIYEEV 307
>ref|XP_008377566.1| PREDICTED: DNA-directed RNA polymerase III subunit RPC3-like
isoform X2 [Malus domestica]
Length = 506
Score = 105 bits (261), Expect = 2e-20
Identities = 58/130 (44%), Positives = 78/130 (60%)
Frame = +3
Query: 15 TIEKRAITAAAPSHSERFSVIVDIGSDIDVKNNQRCSSATAGEKRKYEALEMDNETMAAI 194
TIE+R + AAAPS + RFS++ D +D S + G+KRK++ALE+D E
Sbjct: 185 TIEQRVVAAAAPSGAMRFSILTDSETDA------HGGSMSTGDKRKHDALELDEEFAN-- 236
Query: 195 CEKEVLWRANFEEFVRCLRHKACVANVRSKLDVKTGTVLEAILEATRXXXXXXXXXXXXP 374
+ VLWR NFEEF+RCLRHK CV NVR++LD VL A+L++TR P
Sbjct: 237 -NEMVLWRVNFEEFIRCLRHKVCVENVRARLDDGAALVLRAMLKSTRTAEKKVKTENSVP 295
Query: 375 LSMDTILQEV 404
+S TI +EV
Sbjct: 296 VSFSTIYEEV 305
>ref|XP_009340033.1| PREDICTED: DNA-directed RNA polymerase III subunit RPC3-like [Pyrus
x bretschneideri]
Length = 506
Score = 104 bits (260), Expect = 2e-20
Identities = 57/130 (43%), Positives = 78/130 (60%)
Frame = +3
Query: 15 TIEKRAITAAAPSHSERFSVIVDIGSDIDVKNNQRCSSATAGEKRKYEALEMDNETMAAI 194
TIE+R + AAAPS + RFS++ D +D S + G+KRK++ALE+D E
Sbjct: 185 TIEQRVVAAAAPSGAMRFSILTDSETDA------HGGSMSTGDKRKHDALELDEEFAN-- 236
Query: 195 CEKEVLWRANFEEFVRCLRHKACVANVRSKLDVKTGTVLEAILEATRXXXXXXXXXXXXP 374
+ VLWR NFEEF+RCLRHK C+ NVR++LD VL A+L++TR P
Sbjct: 237 -NEMVLWRVNFEEFIRCLRHKVCIENVRARLDDGAALVLRAMLKSTRTAEKKVKTENSVP 295
Query: 375 LSMDTILQEV 404
+S TI +EV
Sbjct: 296 VSFSTIYEEV 305
>ref|XP_010108344.1| DNA-directed RNA polymerase III subunit RPC3 [Morus notabilis]
gi|587932063|gb|EXC19135.1| DNA-directed RNA polymerase
III subunit RPC3 [Morus notabilis]
Length = 564
Score = 103 bits (257), Expect = 5e-20
Identities = 60/132 (45%), Positives = 80/132 (60%), Gaps = 2/132 (1%)
Frame = +3
Query: 15 TIEKRAITAAAPSHSERFSVIVDIGS--DIDVKNNQRCSSATAGEKRKYEALEMDNETMA 188
T E+R + AAA + RFS++ G+ D D K+ SS GEKRK+ A + D +
Sbjct: 190 TEEQRVLAAAASLDTLRFSILTPSGTEFDEDKKDGDSSSSMGVGEKRKHGAADSD-DAFG 248
Query: 189 AICEKEVLWRANFEEFVRCLRHKACVANVRSKLDVKTGTVLEAILEATRXXXXXXXXXXX 368
+ + +LWRANFEEF R LRHKAC+ NVR++LDV TVL+A+L+ATR
Sbjct: 249 SNENEVILWRANFEEFTRYLRHKACIENVRARLDVGAATVLKAMLDATRSAEKKVKTENS 308
Query: 369 XPLSMDTILQEV 404
LSMDTI +EV
Sbjct: 309 VSLSMDTIFEEV 320
>ref|XP_008377560.1| PREDICTED: DNA-directed RNA polymerase III subunit RPC3-like
isoform X1 [Malus domestica]
Length = 508
Score = 100 bits (248), Expect = 5e-19
Identities = 58/132 (43%), Positives = 78/132 (59%), Gaps = 2/132 (1%)
Frame = +3
Query: 15 TIEKRAITAAAPSHSERFSVIVDIGSDIDVKNNQRCSSATAGEK--RKYEALEMDNETMA 188
TIE+R + AAAPS + RFS++ D +D S + G+K RK++ALE+D E
Sbjct: 185 TIEQRVVAAAAPSGAMRFSILTDSETDA------HGGSMSTGDKVGRKHDALELDEEFAN 238
Query: 189 AICEKEVLWRANFEEFVRCLRHKACVANVRSKLDVKTGTVLEAILEATRXXXXXXXXXXX 368
+ VLWR NFEEF+RCLRHK CV NVR++LD VL A+L++TR
Sbjct: 239 ---NEMVLWRVNFEEFIRCLRHKVCVENVRARLDDGAALVLRAMLKSTRTAEKKVKTENS 295
Query: 369 XPLSMDTILQEV 404
P+S TI +EV
Sbjct: 296 VPVSFSTIYEEV 307