BLASTX nr result
ID: Cinnamomum24_contig00028109
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Cinnamomum24_contig00028109
(379 letters)
Database: ./nr
77,306,371 sequences; 28,104,191,420 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|YP_009172050.1| RNA polymerase beta' subunit (chloroplast) [... 257 2e-66
ref|YP_009171969.1| RNA polymerase beta' subunit (chloroplast) [... 257 2e-66
gb|AKU70964.1| RNA polymerase beta' subunit (chloroplast) [Cinna... 257 2e-66
gb|ABD93814.1| RNA polymerase beta chain, partial (chloroplast) ... 257 2e-66
gb|ABD93863.1| RNA polymerase beta chain, partial (chloroplast) ... 257 2e-66
sp|Q7YJY0.1|RPOC2_CALFG RecName: Full=DNA-directed RNA polymeras... 246 4e-63
ref|NP_862744.2| RNA polymerase beta'' subunit [Calycanthus flor... 246 4e-63
gb|ABD93772.1| RNA polymerase beta chain, partial (chloroplast) ... 246 4e-63
gb|ABD93774.1| RNA polymerase beta chain, partial (chloroplast) ... 246 4e-63
gb|ABD93773.1| RNA polymerase beta chain, partial (chloroplast) ... 244 1e-62
gb|ABD93817.1| RNA polymerase beta chain, partial (chloroplast) ... 240 3e-61
gb|ABD93859.1| RNA polymerase beta chain, partial (chloroplast) ... 240 3e-61
gb|ABD93800.1| RNA polymerase beta chain, partial (chloroplast) ... 238 1e-60
ref|YP_009048277.1| DNA-directed RNA polymerase beta'' chain (ch... 238 2e-60
ref|YP_007474442.1| RNA polymerase beta subunit-2 (chloroplast) ... 238 2e-60
ref|YP_007474360.1| RNA polymerase beta subunit-2 (chloroplast) ... 238 2e-60
gb|AEX98324.1| RNA polymerase beta subunit-2 (chloroplast) [Magn... 238 2e-60
gb|AEX98241.1| RNA polymerase beta' subunit (chloroplast) [Magno... 238 2e-60
ref|YP_006576105.1| RpoC2 (chloroplast) [Magnolia denudata] gi|3... 238 2e-60
ref|YP_004769704.1| RNA polymerase beta' subunit [Magnolia kwang... 238 2e-60
>ref|YP_009172050.1| RNA polymerase beta' subunit (chloroplast) [Machilus balansae]
gi|929982394|gb|ALF35755.1| RNA polymerase beta' subunit
(chloroplast) [Machilus balansae]
Length = 1388
Score = 257 bits (657), Expect = 2e-66
Identities = 126/126 (100%), Positives = 126/126 (100%)
Frame = -2
Query: 378 DRIISNGHWNFIYPTILHENSDLLAKRRRNRFIIPFQSDQEREKELMPRSGISIEIPING 199
DRIISNGHWNFIYPTILHENSDLLAKRRRNRFIIPFQSDQEREKELMPRSGISIEIPING
Sbjct: 546 DRIISNGHWNFIYPTILHENSDLLAKRRRNRFIIPFQSDQEREKELMPRSGISIEIPING 605
Query: 198 VLPRNSILAYFDDPLYRRSSSGITKYGTIGVGSIVKKEDLIEYRRAKEFRPKYQMKVDRF 19
VLPRNSILAYFDDPLYRRSSSGITKYGTIGVGSIVKKEDLIEYRRAKEFRPKYQMKVDRF
Sbjct: 606 VLPRNSILAYFDDPLYRRSSSGITKYGTIGVGSIVKKEDLIEYRRAKEFRPKYQMKVDRF 665
Query: 18 FFIPEE 1
FFIPEE
Sbjct: 666 FFIPEE 671
>ref|YP_009171969.1| RNA polymerase beta' subunit (chloroplast) [Machilus yunnanensis]
gi|929982312|gb|ALF35674.1| RNA polymerase beta' subunit
(chloroplast) [Machilus yunnanensis]
Length = 1388
Score = 257 bits (657), Expect = 2e-66
Identities = 126/126 (100%), Positives = 126/126 (100%)
Frame = -2
Query: 378 DRIISNGHWNFIYPTILHENSDLLAKRRRNRFIIPFQSDQEREKELMPRSGISIEIPING 199
DRIISNGHWNFIYPTILHENSDLLAKRRRNRFIIPFQSDQEREKELMPRSGISIEIPING
Sbjct: 546 DRIISNGHWNFIYPTILHENSDLLAKRRRNRFIIPFQSDQEREKELMPRSGISIEIPING 605
Query: 198 VLPRNSILAYFDDPLYRRSSSGITKYGTIGVGSIVKKEDLIEYRRAKEFRPKYQMKVDRF 19
VLPRNSILAYFDDPLYRRSSSGITKYGTIGVGSIVKKEDLIEYRRAKEFRPKYQMKVDRF
Sbjct: 606 VLPRNSILAYFDDPLYRRSSSGITKYGTIGVGSIVKKEDLIEYRRAKEFRPKYQMKVDRF 665
Query: 18 FFIPEE 1
FFIPEE
Sbjct: 666 FFIPEE 671
>gb|AKU70964.1| RNA polymerase beta' subunit (chloroplast) [Cinnamomum micranthum
f. kanehirae]
Length = 1385
Score = 257 bits (657), Expect = 2e-66
Identities = 126/126 (100%), Positives = 126/126 (100%)
Frame = -2
Query: 378 DRIISNGHWNFIYPTILHENSDLLAKRRRNRFIIPFQSDQEREKELMPRSGISIEIPING 199
DRIISNGHWNFIYPTILHENSDLLAKRRRNRFIIPFQSDQEREKELMPRSGISIEIPING
Sbjct: 543 DRIISNGHWNFIYPTILHENSDLLAKRRRNRFIIPFQSDQEREKELMPRSGISIEIPING 602
Query: 198 VLPRNSILAYFDDPLYRRSSSGITKYGTIGVGSIVKKEDLIEYRRAKEFRPKYQMKVDRF 19
VLPRNSILAYFDDPLYRRSSSGITKYGTIGVGSIVKKEDLIEYRRAKEFRPKYQMKVDRF
Sbjct: 603 VLPRNSILAYFDDPLYRRSSSGITKYGTIGVGSIVKKEDLIEYRRAKEFRPKYQMKVDRF 662
Query: 18 FFIPEE 1
FFIPEE
Sbjct: 663 FFIPEE 668
>gb|ABD93814.1| RNA polymerase beta chain, partial (chloroplast) [Cinnamomum
camphora]
Length = 777
Score = 257 bits (657), Expect = 2e-66
Identities = 126/126 (100%), Positives = 126/126 (100%)
Frame = -2
Query: 378 DRIISNGHWNFIYPTILHENSDLLAKRRRNRFIIPFQSDQEREKELMPRSGISIEIPING 199
DRIISNGHWNFIYPTILHENSDLLAKRRRNRFIIPFQSDQEREKELMPRSGISIEIPING
Sbjct: 53 DRIISNGHWNFIYPTILHENSDLLAKRRRNRFIIPFQSDQEREKELMPRSGISIEIPING 112
Query: 198 VLPRNSILAYFDDPLYRRSSSGITKYGTIGVGSIVKKEDLIEYRRAKEFRPKYQMKVDRF 19
VLPRNSILAYFDDPLYRRSSSGITKYGTIGVGSIVKKEDLIEYRRAKEFRPKYQMKVDRF
Sbjct: 113 VLPRNSILAYFDDPLYRRSSSGITKYGTIGVGSIVKKEDLIEYRRAKEFRPKYQMKVDRF 172
Query: 18 FFIPEE 1
FFIPEE
Sbjct: 173 FFIPEE 178
>gb|ABD93863.1| RNA polymerase beta chain, partial (chloroplast) [Laurus nobilis]
Length = 760
Score = 257 bits (657), Expect = 2e-66
Identities = 126/126 (100%), Positives = 126/126 (100%)
Frame = -2
Query: 378 DRIISNGHWNFIYPTILHENSDLLAKRRRNRFIIPFQSDQEREKELMPRSGISIEIPING 199
DRIISNGHWNFIYPTILHENSDLLAKRRRNRFIIPFQSDQEREKELMPRSGISIEIPING
Sbjct: 50 DRIISNGHWNFIYPTILHENSDLLAKRRRNRFIIPFQSDQEREKELMPRSGISIEIPING 109
Query: 198 VLPRNSILAYFDDPLYRRSSSGITKYGTIGVGSIVKKEDLIEYRRAKEFRPKYQMKVDRF 19
VLPRNSILAYFDDPLYRRSSSGITKYGTIGVGSIVKKEDLIEYRRAKEFRPKYQMKVDRF
Sbjct: 110 VLPRNSILAYFDDPLYRRSSSGITKYGTIGVGSIVKKEDLIEYRRAKEFRPKYQMKVDRF 169
Query: 18 FFIPEE 1
FFIPEE
Sbjct: 170 FFIPEE 175
>sp|Q7YJY0.1|RPOC2_CALFG RecName: Full=DNA-directed RNA polymerase subunit beta''; AltName:
Full=PEP; AltName: Full=Plastid-encoded RNA polymerase
subunit beta''; Short=RNA polymerase subunit beta''
(chloroplast) [Calycanthus floridus var. glaucus]
gi|32399369|emb|CAD28711.1| RNA polymerase beta'
subunit-2 [Calycanthus floridus var. glaucus]
Length = 1377
Score = 246 bits (629), Expect = 4e-63
Identities = 121/126 (96%), Positives = 122/126 (96%)
Frame = -2
Query: 378 DRIISNGHWNFIYPTILHENSDLLAKRRRNRFIIPFQSDQEREKELMPRSGISIEIPING 199
DRIISNGHWNFIYP ILHENSDLLAKRRRNRFIIPFQSDQEREKELMPRSGISIEIPING
Sbjct: 549 DRIISNGHWNFIYPAILHENSDLLAKRRRNRFIIPFQSDQEREKELMPRSGISIEIPING 608
Query: 198 VLPRNSILAYFDDPLYRRSSSGITKYGTIGVGSIVKKEDLIEYRRAKEFRPKYQMKVDRF 19
+L RNSILAYFDDP YRRSSSGITKYGTIGV SIVKKEDLIEYRRAKEFRPKYQMKVDRF
Sbjct: 609 ILRRNSILAYFDDPRYRRSSSGITKYGTIGVDSIVKKEDLIEYRRAKEFRPKYQMKVDRF 668
Query: 18 FFIPEE 1
FFIPEE
Sbjct: 669 FFIPEE 674
>ref|NP_862744.2| RNA polymerase beta'' subunit [Calycanthus floridus var. glaucus]
Length = 1373
Score = 246 bits (629), Expect = 4e-63
Identities = 121/126 (96%), Positives = 122/126 (96%)
Frame = -2
Query: 378 DRIISNGHWNFIYPTILHENSDLLAKRRRNRFIIPFQSDQEREKELMPRSGISIEIPING 199
DRIISNGHWNFIYP ILHENSDLLAKRRRNRFIIPFQSDQEREKELMPRSGISIEIPING
Sbjct: 545 DRIISNGHWNFIYPAILHENSDLLAKRRRNRFIIPFQSDQEREKELMPRSGISIEIPING 604
Query: 198 VLPRNSILAYFDDPLYRRSSSGITKYGTIGVGSIVKKEDLIEYRRAKEFRPKYQMKVDRF 19
+L RNSILAYFDDP YRRSSSGITKYGTIGV SIVKKEDLIEYRRAKEFRPKYQMKVDRF
Sbjct: 605 ILRRNSILAYFDDPRYRRSSSGITKYGTIGVDSIVKKEDLIEYRRAKEFRPKYQMKVDRF 664
Query: 18 FFIPEE 1
FFIPEE
Sbjct: 665 FFIPEE 670
>gb|ABD93772.1| RNA polymerase beta chain, partial (chloroplast) [Calycanthus
floridus]
Length = 861
Score = 246 bits (629), Expect = 4e-63
Identities = 121/126 (96%), Positives = 122/126 (96%)
Frame = -2
Query: 378 DRIISNGHWNFIYPTILHENSDLLAKRRRNRFIIPFQSDQEREKELMPRSGISIEIPING 199
DRIISNGHWNFIYP ILHENSDLLAKRRRNRFIIPFQSDQEREKELMPRSGISIEIPING
Sbjct: 99 DRIISNGHWNFIYPAILHENSDLLAKRRRNRFIIPFQSDQEREKELMPRSGISIEIPING 158
Query: 198 VLPRNSILAYFDDPLYRRSSSGITKYGTIGVGSIVKKEDLIEYRRAKEFRPKYQMKVDRF 19
+L RNSILAYFDDP YRRSSSGITKYGTIGV SIVKKEDLIEYRRAKEFRPKYQMKVDRF
Sbjct: 159 ILRRNSILAYFDDPRYRRSSSGITKYGTIGVDSIVKKEDLIEYRRAKEFRPKYQMKVDRF 218
Query: 18 FFIPEE 1
FFIPEE
Sbjct: 219 FFIPEE 224
>gb|ABD93774.1| RNA polymerase beta chain, partial (chloroplast) [Idiospermum
australiense]
Length = 851
Score = 246 bits (629), Expect = 4e-63
Identities = 121/126 (96%), Positives = 122/126 (96%)
Frame = -2
Query: 378 DRIISNGHWNFIYPTILHENSDLLAKRRRNRFIIPFQSDQEREKELMPRSGISIEIPING 199
DRIISNGHWNFIYP ILHENSDLLAKRRRNRFIIPFQSDQEREKELMPRSGISIEIPING
Sbjct: 91 DRIISNGHWNFIYPAILHENSDLLAKRRRNRFIIPFQSDQEREKELMPRSGISIEIPING 150
Query: 198 VLPRNSILAYFDDPLYRRSSSGITKYGTIGVGSIVKKEDLIEYRRAKEFRPKYQMKVDRF 19
+L RNSILAYFDDP YRRSSSGITKYGTIGV SIVKKEDLIEYRRAKEFRPKYQMKVDRF
Sbjct: 151 ILRRNSILAYFDDPRYRRSSSGITKYGTIGVDSIVKKEDLIEYRRAKEFRPKYQMKVDRF 210
Query: 18 FFIPEE 1
FFIPEE
Sbjct: 211 FFIPEE 216
>gb|ABD93773.1| RNA polymerase beta chain, partial (chloroplast) [Chimonanthus
praecox]
Length = 857
Score = 244 bits (624), Expect = 1e-62
Identities = 120/126 (95%), Positives = 121/126 (96%)
Frame = -2
Query: 378 DRIISNGHWNFIYPTILHENSDLLAKRRRNRFIIPFQSDQEREKELMPRSGISIEIPING 199
DRIISNGHWNFIYP ILHENSDLLAKRRRNRFIIPFQSDQEREKELMPRSGISIEIPING
Sbjct: 99 DRIISNGHWNFIYPAILHENSDLLAKRRRNRFIIPFQSDQEREKELMPRSGISIEIPING 158
Query: 198 VLPRNSILAYFDDPLYRRSSSGITKYGTIGVGSIVKKEDLIEYRRAKEFRPKYQMKVDRF 19
+L RNSILAYFDDP YRRSSSGITKYGT GV SIVKKEDLIEYRRAKEFRPKYQMKVDRF
Sbjct: 159 ILRRNSILAYFDDPRYRRSSSGITKYGTTGVDSIVKKEDLIEYRRAKEFRPKYQMKVDRF 218
Query: 18 FFIPEE 1
FFIPEE
Sbjct: 219 FFIPEE 224
>gb|ABD93817.1| RNA polymerase beta chain, partial (chloroplast) [Daphnandra
micrantha]
Length = 824
Score = 240 bits (612), Expect = 3e-61
Identities = 117/126 (92%), Positives = 121/126 (96%)
Frame = -2
Query: 378 DRIISNGHWNFIYPTILHENSDLLAKRRRNRFIIPFQSDQEREKELMPRSGISIEIPING 199
DRI+SNGHWNFIYP ILH+NSDLLAKRRRNRFIIPFQSDQEREKEL+P SGISIEIPING
Sbjct: 70 DRILSNGHWNFIYPAILHDNSDLLAKRRRNRFIIPFQSDQEREKELIPCSGISIEIPING 129
Query: 198 VLPRNSILAYFDDPLYRRSSSGITKYGTIGVGSIVKKEDLIEYRRAKEFRPKYQMKVDRF 19
+L RNSILAYFDDP YRRSSSGITKYGTIGV SIVKKEDLIEYRRAKEFRPKYQMKVDRF
Sbjct: 130 ILRRNSILAYFDDPRYRRSSSGITKYGTIGVDSIVKKEDLIEYRRAKEFRPKYQMKVDRF 189
Query: 18 FFIPEE 1
FFIPEE
Sbjct: 190 FFIPEE 195
>gb|ABD93859.1| RNA polymerase beta chain, partial (chloroplast) [Hedycarya
arborea]
Length = 761
Score = 240 bits (612), Expect = 3e-61
Identities = 119/126 (94%), Positives = 120/126 (95%)
Frame = -2
Query: 378 DRIISNGHWNFIYPTILHENSDLLAKRRRNRFIIPFQSDQEREKELMPRSGISIEIPING 199
DRIIS G WNFIYP ILHENSDLLAKRRRNRFIIPFQSDQEREKELMPRSGISIEIPING
Sbjct: 51 DRIISKGLWNFIYPAILHENSDLLAKRRRNRFIIPFQSDQEREKELMPRSGISIEIPING 110
Query: 198 VLPRNSILAYFDDPLYRRSSSGITKYGTIGVGSIVKKEDLIEYRRAKEFRPKYQMKVDRF 19
+L RNSILAYFDDP YRRSSSGITKYGTIGVGSIVKKEDLIEYRRAK FRPKYQMKVDRF
Sbjct: 111 ILRRNSILAYFDDPRYRRSSSGITKYGTIGVGSIVKKEDLIEYRRAKGFRPKYQMKVDRF 170
Query: 18 FFIPEE 1
FFIPEE
Sbjct: 171 FFIPEE 176
>gb|ABD93800.1| RNA polymerase beta chain, partial (chloroplast) [Hortonia
floribunda]
Length = 790
Score = 238 bits (608), Expect = 1e-60
Identities = 116/125 (92%), Positives = 120/125 (96%)
Frame = -2
Query: 375 RIISNGHWNFIYPTILHENSDLLAKRRRNRFIIPFQSDQEREKELMPRSGISIEIPINGV 196
RIISNGHWNFIYP IL ENSDLLAKRRRNRF+IPFQ DQEREKELMPRSGISIEIPING+
Sbjct: 67 RIISNGHWNFIYPAILRENSDLLAKRRRNRFLIPFQLDQEREKELMPRSGISIEIPINGI 126
Query: 195 LPRNSILAYFDDPLYRRSSSGITKYGTIGVGSIVKKEDLIEYRRAKEFRPKYQMKVDRFF 16
L RNSILAYFDDP YR++SSGITKYGTIGVGSIVKKEDLIEYRRAKEFRPKYQMKVDRFF
Sbjct: 127 LRRNSILAYFDDPRYRKNSSGITKYGTIGVGSIVKKEDLIEYRRAKEFRPKYQMKVDRFF 186
Query: 15 FIPEE 1
FIPEE
Sbjct: 187 FIPEE 191
>ref|YP_009048277.1| DNA-directed RNA polymerase beta'' chain (chloroplast) [Magnolia
yunnanensis] gi|573015505|gb|AHF72083.1| DNA-directed
RNA polymerase beta'' chain (chloroplast) [Magnolia
yunnanensis]
Length = 1378
Score = 238 bits (606), Expect = 2e-60
Identities = 117/126 (92%), Positives = 119/126 (94%)
Frame = -2
Query: 378 DRIISNGHWNFIYPTILHENSDLLAKRRRNRFIIPFQSDQEREKELMPRSGISIEIPING 199
DRIISNGHWNF+YP ILHENSDLLAKRRRNRFIIPFQ DQEREKELMPRSGISIEIPING
Sbjct: 543 DRIISNGHWNFLYPAILHENSDLLAKRRRNRFIIPFQYDQEREKELMPRSGISIEIPING 602
Query: 198 VLPRNSILAYFDDPLYRRSSSGITKYGTIGVGSIVKKEDLIEYRRAKEFRPKYQMKVDRF 19
+L RNSILAYFDDP YRRSSSGITKYGTI V SIVKKEDLIEYR AKEFRPKYQMKVDRF
Sbjct: 603 ILRRNSILAYFDDPRYRRSSSGITKYGTIEVDSIVKKEDLIEYRGAKEFRPKYQMKVDRF 662
Query: 18 FFIPEE 1
FFIPEE
Sbjct: 663 FFIPEE 668
>ref|YP_007474442.1| RNA polymerase beta subunit-2 (chloroplast) [Magnolia officinalis
subsp. biloba] gi|372862494|gb|AEX98574.1| RNA
polymerase beta subunit-2 (chloroplast) [Magnolia
officinalis subsp. biloba] gi|372862579|gb|AEX98658.1|
RNA polymerase beta subunit-2 (chloroplast) [Magnolia
officinalis subsp. biloba] gi|372862664|gb|AEX98742.1|
RNA polymerase beta subunit-2 (chloroplast) [Magnolia
officinalis subsp. biloba]
Length = 1382
Score = 238 bits (606), Expect = 2e-60
Identities = 117/126 (92%), Positives = 119/126 (94%)
Frame = -2
Query: 378 DRIISNGHWNFIYPTILHENSDLLAKRRRNRFIIPFQSDQEREKELMPRSGISIEIPING 199
DRIISNGHWNF+YP ILHENSDLLAKRRRNRFIIPFQ DQEREKELMPRSGISIEIPING
Sbjct: 547 DRIISNGHWNFLYPAILHENSDLLAKRRRNRFIIPFQYDQEREKELMPRSGISIEIPING 606
Query: 198 VLPRNSILAYFDDPLYRRSSSGITKYGTIGVGSIVKKEDLIEYRRAKEFRPKYQMKVDRF 19
+L RNSILAYFDDP YRRSSSGITKYGTI V SIVKKEDLIEYR AKEFRPKYQMKVDRF
Sbjct: 607 ILRRNSILAYFDDPRYRRSSSGITKYGTIEVDSIVKKEDLIEYRGAKEFRPKYQMKVDRF 666
Query: 18 FFIPEE 1
FFIPEE
Sbjct: 667 FFIPEE 672
>ref|YP_007474360.1| RNA polymerase beta subunit-2 (chloroplast) [Magnolia officinalis]
gi|372862411|gb|AEX98492.1| RNA polymerase beta
subunit-2 (chloroplast) [Magnolia officinalis]
Length = 1382
Score = 238 bits (606), Expect = 2e-60
Identities = 117/126 (92%), Positives = 119/126 (94%)
Frame = -2
Query: 378 DRIISNGHWNFIYPTILHENSDLLAKRRRNRFIIPFQSDQEREKELMPRSGISIEIPING 199
DRIISNGHWNF+YP ILHENSDLLAKRRRNRFIIPFQ DQEREKELMPRSGISIEIPING
Sbjct: 547 DRIISNGHWNFLYPAILHENSDLLAKRRRNRFIIPFQYDQEREKELMPRSGISIEIPING 606
Query: 198 VLPRNSILAYFDDPLYRRSSSGITKYGTIGVGSIVKKEDLIEYRRAKEFRPKYQMKVDRF 19
+L RNSILAYFDDP YRRSSSGITKYGTI V SIVKKEDLIEYR AKEFRPKYQMKVDRF
Sbjct: 607 ILRRNSILAYFDDPRYRRSSSGITKYGTIEVDSIVKKEDLIEYRGAKEFRPKYQMKVDRF 666
Query: 18 FFIPEE 1
FFIPEE
Sbjct: 667 FFIPEE 672
>gb|AEX98324.1| RNA polymerase beta subunit-2 (chloroplast) [Magnolia denudata]
Length = 1382
Score = 238 bits (606), Expect = 2e-60
Identities = 117/126 (92%), Positives = 119/126 (94%)
Frame = -2
Query: 378 DRIISNGHWNFIYPTILHENSDLLAKRRRNRFIIPFQSDQEREKELMPRSGISIEIPING 199
DRIISNGHWNF+YP ILHENSDLLAKRRRNRFIIPFQ DQEREKELMPRSGISIEIPING
Sbjct: 547 DRIISNGHWNFLYPAILHENSDLLAKRRRNRFIIPFQYDQEREKELMPRSGISIEIPING 606
Query: 198 VLPRNSILAYFDDPLYRRSSSGITKYGTIGVGSIVKKEDLIEYRRAKEFRPKYQMKVDRF 19
+L RNSILAYFDDP YRRSSSGITKYGTI V SIVKKEDLIEYR AKEFRPKYQMKVDRF
Sbjct: 607 ILRRNSILAYFDDPRYRRSSSGITKYGTIEVDSIVKKEDLIEYRGAKEFRPKYQMKVDRF 666
Query: 18 FFIPEE 1
FFIPEE
Sbjct: 667 FFIPEE 672
>gb|AEX98241.1| RNA polymerase beta' subunit (chloroplast) [Magnolia liliiflora]
Length = 1382
Score = 238 bits (606), Expect = 2e-60
Identities = 117/126 (92%), Positives = 119/126 (94%)
Frame = -2
Query: 378 DRIISNGHWNFIYPTILHENSDLLAKRRRNRFIIPFQSDQEREKELMPRSGISIEIPING 199
DRIISNGHWNF+YP ILHENSDLLAKRRRNRFIIPFQ DQEREKELMPRSGISIEIPING
Sbjct: 547 DRIISNGHWNFLYPAILHENSDLLAKRRRNRFIIPFQYDQEREKELMPRSGISIEIPING 606
Query: 198 VLPRNSILAYFDDPLYRRSSSGITKYGTIGVGSIVKKEDLIEYRRAKEFRPKYQMKVDRF 19
+L RNSILAYFDDP YRRSSSGITKYGTI V SIVKKEDLIEYR AKEFRPKYQMKVDRF
Sbjct: 607 ILRRNSILAYFDDPRYRRSSSGITKYGTIEVDSIVKKEDLIEYRGAKEFRPKYQMKVDRF 666
Query: 18 FFIPEE 1
FFIPEE
Sbjct: 667 FFIPEE 672
>ref|YP_006576105.1| RpoC2 (chloroplast) [Magnolia denudata] gi|343887529|gb|AEM65208.1|
RpoC2 [Magnolia denudata]
Length = 1382
Score = 238 bits (606), Expect = 2e-60
Identities = 117/126 (92%), Positives = 119/126 (94%)
Frame = -2
Query: 378 DRIISNGHWNFIYPTILHENSDLLAKRRRNRFIIPFQSDQEREKELMPRSGISIEIPING 199
DRIISNGHWNF+YP ILHENSDLLAKRRRNRFIIPFQ DQEREKELMPRSGISIEIPING
Sbjct: 547 DRIISNGHWNFLYPAILHENSDLLAKRRRNRFIIPFQYDQEREKELMPRSGISIEIPING 606
Query: 198 VLPRNSILAYFDDPLYRRSSSGITKYGTIGVGSIVKKEDLIEYRRAKEFRPKYQMKVDRF 19
+L RNSILAYFDDP YRRSSSGITKYGTI V SIVKKEDLIEYR AKEFRPKYQMKVDRF
Sbjct: 607 ILRRNSILAYFDDPRYRRSSSGITKYGTIEVDSIVKKEDLIEYRGAKEFRPKYQMKVDRF 666
Query: 18 FFIPEE 1
FFIPEE
Sbjct: 667 FFIPEE 672
>ref|YP_004769704.1| RNA polymerase beta' subunit [Magnolia kwangsiensis]
gi|302424170|gb|ADL39046.1| RNA polymerase beta' subunit
[Magnolia kwangsiensis]
Length = 1382
Score = 238 bits (606), Expect = 2e-60
Identities = 117/126 (92%), Positives = 119/126 (94%)
Frame = -2
Query: 378 DRIISNGHWNFIYPTILHENSDLLAKRRRNRFIIPFQSDQEREKELMPRSGISIEIPING 199
DRIISNGHWNF+YP ILHENSDLLAKRRRNRFIIPFQ DQEREKELMPRSGISIEIPING
Sbjct: 547 DRIISNGHWNFLYPAILHENSDLLAKRRRNRFIIPFQYDQEREKELMPRSGISIEIPING 606
Query: 198 VLPRNSILAYFDDPLYRRSSSGITKYGTIGVGSIVKKEDLIEYRRAKEFRPKYQMKVDRF 19
+L RNSILAYFDDP YRRSSSGITKYGTI V SIVKKEDLIEYR AKEFRPKYQMKVDRF
Sbjct: 607 ILRRNSILAYFDDPRYRRSSSGITKYGTIEVDSIVKKEDLIEYRGAKEFRPKYQMKVDRF 666
Query: 18 FFIPEE 1
FFIPEE
Sbjct: 667 FFIPEE 672