BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cinnamomum24_contig00028058
         (285 letters)

Database: ./nr 
           77,306,371 sequences; 28,104,191,420 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ACS68693.1| ribulose-1,5-bisphosphate carboxylase/oxygenase s...   122   1e-25
gb|ABQ42089.1| ribulose bisphosphate carboxylase small chain (Ru...   122   1e-25
ref|XP_002532149.1| Ribulose bisphosphate carboxylase small chai...   121   2e-25
gb|ABQ42164.1| ribulose bisphosphate carboxylase small chain (Ru...   120   4e-25
gb|ABQ42090.1| ribulose bisphosphate carboxylase small chain (Ru...   120   4e-25
dbj|BAE46384.1| ribulose-1,5-bisphosphate carboxylase/oxygenase ...   120   5e-25
ref|XP_008446602.1| PREDICTED: ribulose bisphosphate carboxylase...   120   5e-25
ref|XP_010036887.1| PREDICTED: ribulose bisphosphate carboxylase...   119   7e-25
dbj|BAI53119.1| ribulose-1,5-bisphosphate carboxylase/oxygenase ...   119   7e-25
gb|AFO67218.1| putative ribulose-1,5-bisphosphate carboxylase/ox...   119   9e-25
ref|XP_007033270.1| Ribulose bisphosphate carboxylase (small cha...   118   2e-24
ref|XP_007033269.1| Ribulose bisphosphate carboxylase (small cha...   118   2e-24
ref|XP_008381263.1| PREDICTED: ribulose bisphosphate carboxylase...   117   3e-24
ref|XP_009357813.1| PREDICTED: ribulose bisphosphate carboxylase...   117   4e-24
ref|XP_009357812.1| PREDICTED: ribulose bisphosphate carboxylase...   117   4e-24
emb|CAD11990.1| ribulose-1,5-bisphosphate carboxylase/oxygenase ...   116   6e-24
gb|AIB04188.1| ribulose-1,5-bisphosphate carboxylase/oxygenase s...   115   1e-23
ref|XP_010693059.1| PREDICTED: ribulose bisphosphate carboxylase...   114   3e-23
ref|XP_010693073.1| PREDICTED: ribulose bisphosphate carboxylase...   114   3e-23
ref|XP_004135094.1| PREDICTED: ribulose bisphosphate carboxylase...   114   3e-23

>gb|ACS68693.1| ribulose-1,5-bisphosphate carboxylase/oxygenase small subunit
           [Sonneratia alba] gi|241865463|gb|ACS68764.1|
           ribulose-1,5-bisphosphate carboxylase/oxygenase small
           subunit, partial [Sonneratia alba]
          Length = 173

 Score =  122 bits (305), Expect = 1e-25
 Identities = 58/69 (84%), Positives = 63/69 (91%)
 Frame = -2

Query: 209 NRAAPAQASMVAPFTGLKSTSAFPVSRKNVDITSLASNGGRVSCMKVWPPLGLKKYETLS 30
           NR APAQASMVAPFTGLKS+SAFP +RK  DITSLASNGGRV CM+VWPP GLKK+ETLS
Sbjct: 8   NRTAPAQASMVAPFTGLKSSSAFPTTRKTADITSLASNGGRVQCMQVWPPEGLKKFETLS 67

Query: 29  YLPNLTREQ 3
           YLP+LTREQ
Sbjct: 68  YLPDLTREQ 76


>gb|ABQ42089.1| ribulose bisphosphate carboxylase small chain (RuBisCO small
           subunit) [Sonneratia alba]
          Length = 178

 Score =  122 bits (305), Expect = 1e-25
 Identities = 58/69 (84%), Positives = 63/69 (91%)
 Frame = -2

Query: 209 NRAAPAQASMVAPFTGLKSTSAFPVSRKNVDITSLASNGGRVSCMKVWPPLGLKKYETLS 30
           NR APAQASMVAPFTGLKS+SAFP +RK  DITSLASNGGRV CM+VWPP GLKK+ETLS
Sbjct: 9   NRTAPAQASMVAPFTGLKSSSAFPTTRKTADITSLASNGGRVQCMQVWPPEGLKKFETLS 68

Query: 29  YLPNLTREQ 3
           YLP+LTREQ
Sbjct: 69  YLPDLTREQ 77


>ref|XP_002532149.1| Ribulose bisphosphate carboxylase small chain, chloroplast
           precursor, putative [Ricinus communis]
           gi|223528159|gb|EEF30223.1| Ribulose bisphosphate
           carboxylase small chain, chloroplast precursor, putative
           [Ricinus communis]
          Length = 185

 Score =  121 bits (303), Expect = 2e-25
 Identities = 59/70 (84%), Positives = 66/70 (94%), Gaps = 1/70 (1%)
 Frame = -2

Query: 209 NRAAPAQASMVAPFTGLKSTSAFPVSRK-NVDITSLASNGGRVSCMKVWPPLGLKKYETL 33
           NRA+PAQASMVAPFTGLKSTSAFPV+RK N DIT+LA+NGGRV CM+VWPPLG KK+ETL
Sbjct: 15  NRASPAQASMVAPFTGLKSTSAFPVTRKTNTDITTLANNGGRVQCMQVWPPLGKKKFETL 74

Query: 32  SYLPNLTREQ 3
           SYLP+LTREQ
Sbjct: 75  SYLPDLTREQ 84


>gb|ABQ42164.1| ribulose bisphosphate carboxylase small chain (RuBisCO small
           subunit) [Sonneratia ovata]
          Length = 178

 Score =  120 bits (301), Expect = 4e-25
 Identities = 57/69 (82%), Positives = 62/69 (89%)
 Frame = -2

Query: 209 NRAAPAQASMVAPFTGLKSTSAFPVSRKNVDITSLASNGGRVSCMKVWPPLGLKKYETLS 30
           NR APAQASM APFTGLKS+SAFP +RK  DITSLASNGGRV CM+VWPP GLKK+ETLS
Sbjct: 9   NRTAPAQASMAAPFTGLKSSSAFPTTRKTADITSLASNGGRVQCMQVWPPEGLKKFETLS 68

Query: 29  YLPNLTREQ 3
           YLP+LTREQ
Sbjct: 69  YLPDLTREQ 77


>gb|ABQ42090.1| ribulose bisphosphate carboxylase small chain (RuBisCO small
           subunit) [Sonneratia apetala]
          Length = 178

 Score =  120 bits (301), Expect = 4e-25
 Identities = 57/69 (82%), Positives = 63/69 (91%)
 Frame = -2

Query: 209 NRAAPAQASMVAPFTGLKSTSAFPVSRKNVDITSLASNGGRVSCMKVWPPLGLKKYETLS 30
           NR APAQASMVAPFTGLKS+SAFP +RK  DITSLASNGGRV CM+VWPP GLKK+ETLS
Sbjct: 9   NRTAPAQASMVAPFTGLKSSSAFPTTRKTADITSLASNGGRVQCMQVWPPEGLKKFETLS 68

Query: 29  YLPNLTREQ 3
           YLP+L+REQ
Sbjct: 69  YLPDLSREQ 77


>dbj|BAE46384.1| ribulose-1,5-bisphosphate carboxylase/oxygenase small subunit
           [Panax ginseng]
          Length = 183

 Score =  120 bits (300), Expect = 5e-25
 Identities = 58/69 (84%), Positives = 63/69 (91%)
 Frame = -2

Query: 209 NRAAPAQASMVAPFTGLKSTSAFPVSRKNVDITSLASNGGRVSCMKVWPPLGLKKYETLS 30
           +RA PAQASMVAPFTGLKST+AFPV+RK  DITSL SNGGRV CMKVWPPLGLKK+ETLS
Sbjct: 15  SRAVPAQASMVAPFTGLKSTAAFPVTRKVNDITSLPSNGGRVQCMKVWPPLGLKKFETLS 74

Query: 29  YLPNLTREQ 3
           YLP LT+EQ
Sbjct: 75  YLPQLTQEQ 83


>ref|XP_008446602.1| PREDICTED: ribulose bisphosphate carboxylase small chain,
           chloroplastic [Cucumis melo]
          Length = 185

 Score =  120 bits (300), Expect = 5e-25
 Identities = 56/69 (81%), Positives = 64/69 (92%)
 Frame = -2

Query: 209 NRAAPAQASMVAPFTGLKSTSAFPVSRKNVDITSLASNGGRVSCMKVWPPLGLKKYETLS 30
           N A+PAQASMVAPFTGLKS +AFPV+RKN DIT+LASNGGRV CMKVWPPLGLKK+ETLS
Sbjct: 15  NSASPAQASMVAPFTGLKSAAAFPVTRKNNDITTLASNGGRVQCMKVWPPLGLKKFETLS 74

Query: 29  YLPNLTREQ 3
           YLP+++ EQ
Sbjct: 75  YLPDMSNEQ 83


>ref|XP_010036887.1| PREDICTED: ribulose bisphosphate carboxylase small chain,
           chloroplastic-like [Eucalyptus grandis]
           gi|629082103|gb|KCW48548.1| hypothetical protein
           EUGRSUZ_K02223 [Eucalyptus grandis]
          Length = 181

 Score =  119 bits (299), Expect = 7e-25
 Identities = 56/69 (81%), Positives = 64/69 (92%)
 Frame = -2

Query: 209 NRAAPAQASMVAPFTGLKSTSAFPVSRKNVDITSLASNGGRVSCMKVWPPLGLKKYETLS 30
           NRA+PAQASMVAPFTGLKS SAFPV+RK+ DITSLASNGGRV CM+VWPP+G KK+ETLS
Sbjct: 15  NRASPAQASMVAPFTGLKSASAFPVTRKSADITSLASNGGRVQCMQVWPPIGKKKFETLS 74

Query: 29  YLPNLTREQ 3
           YLP L+RE+
Sbjct: 75  YLPPLSREE 83


>dbj|BAI53119.1| ribulose-1,5-bisphosphate carboxylase/oxygenase small subunit
           [Eucalyptus globulus]
          Length = 181

 Score =  119 bits (299), Expect = 7e-25
 Identities = 56/69 (81%), Positives = 64/69 (92%)
 Frame = -2

Query: 209 NRAAPAQASMVAPFTGLKSTSAFPVSRKNVDITSLASNGGRVSCMKVWPPLGLKKYETLS 30
           NRA+PAQASMVAPFTGLKS SAFPV+RK+ DITSLASNGGRV CM+VWPP+G KK+ETLS
Sbjct: 15  NRASPAQASMVAPFTGLKSASAFPVTRKSADITSLASNGGRVQCMQVWPPIGKKKFETLS 74

Query: 29  YLPNLTREQ 3
           YLP L+RE+
Sbjct: 75  YLPPLSREE 83


>gb|AFO67218.1| putative ribulose-1,5-bisphosphate carboxylase/oxygenase small
           subunit [Aralia elata]
          Length = 183

 Score =  119 bits (298), Expect = 9e-25
 Identities = 58/69 (84%), Positives = 63/69 (91%)
 Frame = -2

Query: 209 NRAAPAQASMVAPFTGLKSTSAFPVSRKNVDITSLASNGGRVSCMKVWPPLGLKKYETLS 30
           +RAAPAQASMVAPFTGLKST+AFPV+RK  DITSL SNGGRV CMKVWPPLGLKK+ETLS
Sbjct: 15  SRAAPAQASMVAPFTGLKSTAAFPVTRKVNDITSLPSNGGRVQCMKVWPPLGLKKFETLS 74

Query: 29  YLPNLTREQ 3
           YLP LT E+
Sbjct: 75  YLPPLTNEE 83


>ref|XP_007033270.1| Ribulose bisphosphate carboxylase (small chain) family protein
           isoform 2 [Theobroma cacao] gi|508712299|gb|EOY04196.1|
           Ribulose bisphosphate carboxylase (small chain) family
           protein isoform 2 [Theobroma cacao]
          Length = 184

 Score =  118 bits (296), Expect = 2e-24
 Identities = 59/70 (84%), Positives = 65/70 (92%), Gaps = 1/70 (1%)
 Frame = -2

Query: 209 NRAAPAQASMVAPFTGLKSTSAFPVSRK-NVDITSLASNGGRVSCMKVWPPLGLKKYETL 33
           NRA+PAQASMVAPFTGLKSTSA PV+RK N DITSLASNGGRV CM+VWPPLG KK+ETL
Sbjct: 15  NRASPAQASMVAPFTGLKSTSALPVARKANNDITSLASNGGRVQCMQVWPPLGKKKFETL 74

Query: 32  SYLPNLTREQ 3
           SYLP+LTRE+
Sbjct: 75  SYLPDLTRER 84


>ref|XP_007033269.1| Ribulose bisphosphate carboxylase (small chain) family protein
           isoform 1 [Theobroma cacao] gi|508712298|gb|EOY04195.1|
           Ribulose bisphosphate carboxylase (small chain) family
           protein isoform 1 [Theobroma cacao]
          Length = 189

 Score =  118 bits (296), Expect = 2e-24
 Identities = 59/70 (84%), Positives = 65/70 (92%), Gaps = 1/70 (1%)
 Frame = -2

Query: 209 NRAAPAQASMVAPFTGLKSTSAFPVSRK-NVDITSLASNGGRVSCMKVWPPLGLKKYETL 33
           NRA+PAQASMVAPFTGLKSTSA PV+RK N DITSLASNGGRV CM+VWPPLG KK+ETL
Sbjct: 15  NRASPAQASMVAPFTGLKSTSALPVARKANNDITSLASNGGRVQCMQVWPPLGKKKFETL 74

Query: 32  SYLPNLTREQ 3
           SYLP+LTRE+
Sbjct: 75  SYLPDLTRER 84


>ref|XP_008381263.1| PREDICTED: ribulose bisphosphate carboxylase small chain,
           chloroplastic [Malus domestica]
          Length = 183

 Score =  117 bits (293), Expect = 3e-24
 Identities = 56/68 (82%), Positives = 64/68 (94%)
 Frame = -2

Query: 209 NRAAPAQASMVAPFTGLKSTSAFPVSRKNVDITSLASNGGRVSCMKVWPPLGLKKYETLS 30
           +RAAPAQASMVAPFTGLKS+SAFPV+RK+ DITS+ASNGGRV CM+VWPPLGLKK+ETLS
Sbjct: 17  DRAAPAQASMVAPFTGLKSSSAFPVTRKSNDITSIASNGGRVQCMQVWPPLGLKKFETLS 76

Query: 29  YLPNLTRE 6
           YLP L+ E
Sbjct: 77  YLPPLSSE 84


>ref|XP_009357813.1| PREDICTED: ribulose bisphosphate carboxylase small chain,
           chloroplastic-like isoform X2 [Pyrus x bretschneideri]
          Length = 141

 Score =  117 bits (292), Expect = 4e-24
 Identities = 56/68 (82%), Positives = 64/68 (94%)
 Frame = -2

Query: 209 NRAAPAQASMVAPFTGLKSTSAFPVSRKNVDITSLASNGGRVSCMKVWPPLGLKKYETLS 30
           +RAAPAQASMVAPFTGLKS+SAFPV+RK+ DITS+ASNGGRV CM+VWPPLGLKK+ETLS
Sbjct: 17  DRAAPAQASMVAPFTGLKSSSAFPVTRKSNDITSIASNGGRVQCMQVWPPLGLKKFETLS 76

Query: 29  YLPNLTRE 6
           YLP L+ E
Sbjct: 77  YLPPLSPE 84


>ref|XP_009357812.1| PREDICTED: ribulose bisphosphate carboxylase small chain,
           chloroplastic-like isoform X1 [Pyrus x bretschneideri]
          Length = 183

 Score =  117 bits (292), Expect = 4e-24
 Identities = 56/68 (82%), Positives = 64/68 (94%)
 Frame = -2

Query: 209 NRAAPAQASMVAPFTGLKSTSAFPVSRKNVDITSLASNGGRVSCMKVWPPLGLKKYETLS 30
           +RAAPAQASMVAPFTGLKS+SAFPV+RK+ DITS+ASNGGRV CM+VWPPLGLKK+ETLS
Sbjct: 17  DRAAPAQASMVAPFTGLKSSSAFPVTRKSNDITSIASNGGRVQCMQVWPPLGLKKFETLS 76

Query: 29  YLPNLTRE 6
           YLP L+ E
Sbjct: 77  YLPPLSPE 84


>emb|CAD11990.1| ribulose-1,5-bisphosphate carboxylase/oxygenase small subunit
           [Coffea arabica] gi|24940140|emb|CAD11991.1|
           ribulose-1,5-bisphosphate carboxylase/oxygenase small
           subunit [Coffea arabica]
          Length = 181

 Score =  116 bits (291), Expect = 6e-24
 Identities = 54/68 (79%), Positives = 63/68 (92%)
 Frame = -2

Query: 206 RAAPAQASMVAPFTGLKSTSAFPVSRKNVDITSLASNGGRVSCMKVWPPLGLKKYETLSY 27
           RA+PAQASMVAPF GLK+ S+FP+S+K+VDITSLA+NGGRV CM+VWPP GLKKYETLSY
Sbjct: 16  RASPAQASMVAPFNGLKAASSFPISKKSVDITSLATNGGRVQCMQVWPPRGLKKYETLSY 75

Query: 26  LPNLTREQ 3
           LP+LT EQ
Sbjct: 76  LPDLTDEQ 83


>gb|AIB04188.1| ribulose-1,5-bisphosphate carboxylase/oxygenase small subunit
           [Camellia oleifera]
          Length = 176

 Score =  115 bits (288), Expect = 1e-23
 Identities = 58/67 (86%), Positives = 62/67 (92%), Gaps = 1/67 (1%)
 Frame = -2

Query: 200 APAQASMVAPFTGLKSTSAFPVSRK-NVDITSLASNGGRVSCMKVWPPLGLKKYETLSYL 24
           APAQASMVAPFTGLKSTSAFPV+RK + DITSLASNGGRV CMKVWPPLGLKK+ETLSYL
Sbjct: 12  APAQASMVAPFTGLKSTSAFPVTRKLDTDITSLASNGGRVQCMKVWPPLGLKKFETLSYL 71

Query: 23  PNLTREQ 3
           P LT+ Q
Sbjct: 72  PPLTQVQ 78


>ref|XP_010693059.1| PREDICTED: ribulose bisphosphate carboxylase small chain [Beta
           vulgaris subsp. vulgaris] gi|870867682|gb|KMT18551.1|
           hypothetical protein BVRB_2g026850 [Beta vulgaris subsp.
           vulgaris]
          Length = 180

 Score =  114 bits (285), Expect = 3e-23
 Identities = 55/65 (84%), Positives = 59/65 (90%)
 Frame = -2

Query: 197 PAQASMVAPFTGLKSTSAFPVSRKNVDITSLASNGGRVSCMKVWPPLGLKKYETLSYLPN 18
           PAQASMVAPF GLKST AFPV++KN DITSLASNGGRV CM+VWPPLGLKK+ETLSYLP 
Sbjct: 18  PAQASMVAPFNGLKSTVAFPVTKKNDDITSLASNGGRVQCMQVWPPLGLKKFETLSYLPP 77

Query: 17  LTREQ 3
           LT EQ
Sbjct: 78  LTTEQ 82


>ref|XP_010693073.1| PREDICTED: ribulose bisphosphate carboxylase small chain-like [Beta
           vulgaris subsp. vulgaris] gi|870867681|gb|KMT18550.1|
           hypothetical protein BVRB_2g026840 [Beta vulgaris subsp.
           vulgaris]
          Length = 180

 Score =  114 bits (285), Expect = 3e-23
 Identities = 55/65 (84%), Positives = 59/65 (90%)
 Frame = -2

Query: 197 PAQASMVAPFTGLKSTSAFPVSRKNVDITSLASNGGRVSCMKVWPPLGLKKYETLSYLPN 18
           PAQASMVAPF GLKST AFPV++KN DITSLASNGGRV CM+VWPPLGLKK+ETLSYLP 
Sbjct: 18  PAQASMVAPFNGLKSTVAFPVTKKNDDITSLASNGGRVQCMQVWPPLGLKKFETLSYLPP 77

Query: 17  LTREQ 3
           LT EQ
Sbjct: 78  LTTEQ 82


>ref|XP_004135094.1| PREDICTED: ribulose bisphosphate carboxylase small chain,
           chloroplastic [Cucumis sativus]
           gi|700196908|gb|KGN52085.1| hypothetical protein
           Csa_5G609710 [Cucumis sativus]
          Length = 185

 Score =  114 bits (285), Expect = 3e-23
 Identities = 53/70 (75%), Positives = 65/70 (92%), Gaps = 1/70 (1%)
 Frame = -2

Query: 209 NRAAPAQASMVAPFTGLKSTSAFPVSRKN-VDITSLASNGGRVSCMKVWPPLGLKKYETL 33
           N A+PAQASMVAPFTGLKS++ FP++RKN VDIT+LASNGG+V CMKVWPPLGL+K+ETL
Sbjct: 15  NSASPAQASMVAPFTGLKSSAGFPITRKNNVDITTLASNGGKVQCMKVWPPLGLRKFETL 74

Query: 32  SYLPNLTREQ 3
           SYLP+++ EQ
Sbjct: 75  SYLPDMSNEQ 84