BLASTX nr result
ID: Cinnamomum24_contig00027184
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Cinnamomum24_contig00027184
(457 letters)
Database: ./nr
77,306,371 sequences; 28,104,191,420 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|AIU48157.1| MSH1, partial [Magnolia denudata] 189 9e-46
gb|AIU48172.1| MSH1, partial [Iris japonica] 140 4e-44
gb|AIU48175.1| MSH1, partial [Chimonanthus praecox] 180 3e-43
gb|AIU48204.1| MSH1, partial [Trachycarpus fortunei] 175 1e-41
ref|XP_010264855.1| PREDICTED: DNA mismatch repair protein MSH1,... 174 3e-41
ref|XP_010264854.1| PREDICTED: DNA mismatch repair protein MSH1,... 174 3e-41
ref|XP_010264853.1| PREDICTED: DNA mismatch repair protein MSH1,... 174 3e-41
gb|AIU48199.1| MSH1, partial [Platanus x acerifolia] 173 4e-41
gb|AIU48170.1| MSH1, partial [Illicium henryi] 173 4e-41
ref|XP_008809666.1| PREDICTED: DNA mismatch repair protein MSH1,... 171 1e-40
gb|AIU48171.1| MSH1, partial [Buxus sinica] 169 7e-40
gb|AIU48198.1| MSH1, partial [Cinnamomum camphora] 169 1e-39
ref|XP_012487343.1| PREDICTED: DNA mismatch repair protein MSH1,... 168 1e-39
ref|XP_010918844.1| PREDICTED: DNA mismatch repair protein MSH1,... 168 1e-39
gb|AIU48167.1| MSH1, partial [Citrus sinensis] 168 2e-39
gb|AIU48164.1| MSH1, partial [Citrus clementina] 168 2e-39
gb|KDO52258.1| hypothetical protein CISIN_1g0015701mg, partial [... 168 2e-39
ref|XP_006480236.1| PREDICTED: DNA mismatch repair protein MSH1,... 168 2e-39
ref|XP_006480235.1| PREDICTED: DNA mismatch repair protein MSH1,... 168 2e-39
ref|XP_006420382.1| hypothetical protein CICLE_v10004190mg [Citr... 168 2e-39
>gb|AIU48157.1| MSH1, partial [Magnolia denudata]
Length = 729
Score = 189 bits (479), Expect = 9e-46
Identities = 89/105 (84%), Positives = 99/105 (94%)
Frame = -3
Query: 455 ETISLDGDEDQEISSFSNIPEEFFVDMESTWKGRVKRIHAEKAFSEVERAAEALSEAVTE 276
E +SLDG++D EISSF NIPE+FF DMES+WKGRVKR+HAEKAF+EVERAAEALS+AVTE
Sbjct: 259 EIVSLDGEKDHEISSFPNIPEDFFEDMESSWKGRVKRVHAEKAFAEVERAAEALSKAVTE 318
Query: 275 DFLPIVSRVKAIMSPLGGPKGEISYAREHEAVWFKGKRFAPSVWS 141
D LPI+ RVKA+MSPLGGPKGEISYAREHEAVWFKGKRFAPSVWS
Sbjct: 319 DLLPIILRVKAVMSPLGGPKGEISYAREHEAVWFKGKRFAPSVWS 363
Score = 75.5 bits (184), Expect = 1e-11
Identities = 38/53 (71%), Positives = 41/53 (77%)
Frame = -2
Query: 174 QGKTFCTICVVCSPGEEQIKQLRSATDSKGRKVGEEWFTTSKVENALNRYHEA 16
+GK F S GEEQIK L+ ATDSKGR VGEEWFTTSKVE+ALNRYHEA
Sbjct: 353 KGKRFAPSVWSGSHGEEQIKLLKPATDSKGRNVGEEWFTTSKVEDALNRYHEA 405
>gb|AIU48172.1| MSH1, partial [Iris japonica]
Length = 829
Score = 140 bits (352), Expect(2) = 4e-44
Identities = 73/112 (65%), Positives = 87/112 (77%)
Frame = -3
Query: 455 ETISLDGDEDQEISSFSNIPEEFFVDMESTWKGRVKRIHAEKAFSEVERAAEALSEAVTE 276
E ISL+ + QEISS IP +FF DMES+WKGRVKRIH E+ V+RAAE LS AV E
Sbjct: 335 EMISLE--QGQEISS---IPSDFFYDMESSWKGRVKRIHVEE---NVDRAAELLSIAVME 386
Query: 275 DFLPIVSRVKAIMSPLGGPKGEISYAREHEAVWFKGKRFAPSVWSVVLGKNK 120
DF+P+V RVK+ +SPLGGPKGEI YAREHEAVWFKG+ F PSVW+ LG+ +
Sbjct: 387 DFIPVVQRVKSSVSPLGGPKGEICYAREHEAVWFKGRHFMPSVWANTLGEEQ 438
Score = 65.1 bits (157), Expect(2) = 4e-44
Identities = 30/39 (76%), Positives = 34/39 (87%)
Frame = -2
Query: 132 GEEQIKQLRSATDSKGRKVGEEWFTTSKVENALNRYHEA 16
GEEQIKQLR A DSK RKVGEEW+TT+KVE+A+ RYH A
Sbjct: 435 GEEQIKQLRPAVDSKRRKVGEEWYTTTKVEDAILRYHHA 473
>gb|AIU48175.1| MSH1, partial [Chimonanthus praecox]
Length = 761
Score = 180 bits (457), Expect = 3e-43
Identities = 92/127 (72%), Positives = 101/127 (79%)
Frame = -3
Query: 455 ETISLDGDEDQEISSFSNIPEEFFVDMESTWKGRVKRIHAEKAFSEVERAAEALSEAVTE 276
E I LDG+ DQEIS IPEEFFVDMES WKGRVKR+HAE AF EVERAA+ALS AVTE
Sbjct: 259 EMICLDGETDQEISFSPIIPEEFFVDMESPWKGRVKRVHAEDAFIEVERAADALSRAVTE 318
Query: 275 DFLPIVSRVKAIMSPLGGPKGEISYAREHEAVWFKGKRFAPSVWSVVLGKNKSNSSDLRQ 96
DFLPIVSRVKAIMSPLGGPKGEISY+REHEAVWFKGKRF PSVWS G+ +
Sbjct: 319 DFLPIVSRVKAIMSPLGGPKGEISYSREHEAVWFKGKRFEPSVWSGSPGEEQIKQLRSAT 378
Query: 95 IQKGERL 75
KG+++
Sbjct: 379 DSKGKKV 385
Score = 82.4 bits (202), Expect = 1e-13
Identities = 42/53 (79%), Positives = 44/53 (83%)
Frame = -2
Query: 174 QGKTFCTICVVCSPGEEQIKQLRSATDSKGRKVGEEWFTTSKVENALNRYHEA 16
+GK F SPGEEQIKQLRSATDSKG+KVGEEWFTTSKVENAL RYHEA
Sbjct: 353 KGKRFEPSVWSGSPGEEQIKQLRSATDSKGKKVGEEWFTTSKVENALVRYHEA 405
>gb|AIU48204.1| MSH1, partial [Trachycarpus fortunei]
Length = 848
Score = 175 bits (443), Expect = 1e-41
Identities = 83/112 (74%), Positives = 97/112 (86%)
Frame = -3
Query: 455 ETISLDGDEDQEISSFSNIPEEFFVDMESTWKGRVKRIHAEKAFSEVERAAEALSEAVTE 276
E ISL G+ DQEI+SF IP EFF DMES+WKGRVKRIHAE+AF+EVERAA+ALS AV E
Sbjct: 259 EIISLSGESDQEINSFEFIPREFFEDMESSWKGRVKRIHAEEAFAEVERAAKALSVAVME 318
Query: 275 DFLPIVSRVKAIMSPLGGPKGEISYAREHEAVWFKGKRFAPSVWSVVLGKNK 120
DF P+VSRVK+++SPLGGPKGEI YAREHEAVWFKGKRF P+VW+ LG+ +
Sbjct: 319 DFFPVVSRVKSVVSPLGGPKGEICYAREHEAVWFKGKRFMPAVWANTLGEEQ 370
Score = 77.4 bits (189), Expect = 4e-12
Identities = 38/53 (71%), Positives = 42/53 (79%)
Frame = -2
Query: 174 QGKTFCTICVVCSPGEEQIKQLRSATDSKGRKVGEEWFTTSKVENALNRYHEA 16
+GK F + GEEQIKQLR ATDSKGRKVGEEWFTT KV++ALNRYHEA
Sbjct: 353 KGKRFMPAVWANTLGEEQIKQLRPATDSKGRKVGEEWFTTMKVDDALNRYHEA 405
>ref|XP_010264855.1| PREDICTED: DNA mismatch repair protein MSH1, mitochondrial isoform
X3 [Nelumbo nucifera]
Length = 1062
Score = 174 bits (440), Expect = 3e-41
Identities = 82/112 (73%), Positives = 97/112 (86%)
Frame = -3
Query: 455 ETISLDGDEDQEISSFSNIPEEFFVDMESTWKGRVKRIHAEKAFSEVERAAEALSEAVTE 276
E I LDG+ DQ+ SSF IP EFFVDMES+WKGRVKRIHAE+A++EVE+AAEALS AV E
Sbjct: 439 EVILLDGESDQKFSSFLAIPSEFFVDMESSWKGRVKRIHAEEAYAEVEKAAEALSIAVME 498
Query: 275 DFLPIVSRVKAIMSPLGGPKGEISYAREHEAVWFKGKRFAPSVWSVVLGKNK 120
DFLPI+SR+KA +PLGGPKGE+SYAREHEAVWFKGKRFAP+VW+ G+ +
Sbjct: 499 DFLPIISRIKATAAPLGGPKGEVSYAREHEAVWFKGKRFAPTVWAGTPGEQE 550
Score = 81.3 bits (199), Expect = 3e-13
Identities = 40/58 (68%), Positives = 45/58 (77%)
Frame = -2
Query: 174 QGKTFCTICVVCSPGEEQIKQLRSATDSKGRKVGEEWFTTSKVENALNRYHEACDGAK 1
+GK F +PGE++IKQLR ATDSKGRKVGEEWFTT KVE+AL RYHEA D AK
Sbjct: 533 KGKRFAPTVWAGTPGEQEIKQLRPATDSKGRKVGEEWFTTKKVEDALLRYHEAGDKAK 590
>ref|XP_010264854.1| PREDICTED: DNA mismatch repair protein MSH1, mitochondrial isoform
X2 [Nelumbo nucifera]
Length = 1139
Score = 174 bits (440), Expect = 3e-41
Identities = 82/112 (73%), Positives = 97/112 (86%)
Frame = -3
Query: 455 ETISLDGDEDQEISSFSNIPEEFFVDMESTWKGRVKRIHAEKAFSEVERAAEALSEAVTE 276
E I LDG+ DQ+ SSF IP EFFVDMES+WKGRVKRIHAE+A++EVE+AAEALS AV E
Sbjct: 516 EVILLDGESDQKFSSFLAIPSEFFVDMESSWKGRVKRIHAEEAYAEVEKAAEALSIAVME 575
Query: 275 DFLPIVSRVKAIMSPLGGPKGEISYAREHEAVWFKGKRFAPSVWSVVLGKNK 120
DFLPI+SR+KA +PLGGPKGE+SYAREHEAVWFKGKRFAP+VW+ G+ +
Sbjct: 576 DFLPIISRIKATAAPLGGPKGEVSYAREHEAVWFKGKRFAPTVWAGTPGEQE 627
Score = 81.3 bits (199), Expect = 3e-13
Identities = 40/58 (68%), Positives = 45/58 (77%)
Frame = -2
Query: 174 QGKTFCTICVVCSPGEEQIKQLRSATDSKGRKVGEEWFTTSKVENALNRYHEACDGAK 1
+GK F +PGE++IKQLR ATDSKGRKVGEEWFTT KVE+AL RYHEA D AK
Sbjct: 610 KGKRFAPTVWAGTPGEQEIKQLRPATDSKGRKVGEEWFTTKKVEDALLRYHEAGDKAK 667
>ref|XP_010264853.1| PREDICTED: DNA mismatch repair protein MSH1, mitochondrial isoform
X1 [Nelumbo nucifera]
Length = 1142
Score = 174 bits (440), Expect = 3e-41
Identities = 82/112 (73%), Positives = 97/112 (86%)
Frame = -3
Query: 455 ETISLDGDEDQEISSFSNIPEEFFVDMESTWKGRVKRIHAEKAFSEVERAAEALSEAVTE 276
E I LDG+ DQ+ SSF IP EFFVDMES+WKGRVKRIHAE+A++EVE+AAEALS AV E
Sbjct: 519 EVILLDGESDQKFSSFLAIPSEFFVDMESSWKGRVKRIHAEEAYAEVEKAAEALSIAVME 578
Query: 275 DFLPIVSRVKAIMSPLGGPKGEISYAREHEAVWFKGKRFAPSVWSVVLGKNK 120
DFLPI+SR+KA +PLGGPKGE+SYAREHEAVWFKGKRFAP+VW+ G+ +
Sbjct: 579 DFLPIISRIKATAAPLGGPKGEVSYAREHEAVWFKGKRFAPTVWAGTPGEQE 630
Score = 81.3 bits (199), Expect = 3e-13
Identities = 40/58 (68%), Positives = 45/58 (77%)
Frame = -2
Query: 174 QGKTFCTICVVCSPGEEQIKQLRSATDSKGRKVGEEWFTTSKVENALNRYHEACDGAK 1
+GK F +PGE++IKQLR ATDSKGRKVGEEWFTT KVE+AL RYHEA D AK
Sbjct: 613 KGKRFAPTVWAGTPGEQEIKQLRPATDSKGRKVGEEWFTTKKVEDALLRYHEAGDKAK 670
>gb|AIU48199.1| MSH1, partial [Platanus x acerifolia]
Length = 1029
Score = 173 bits (439), Expect = 4e-41
Identities = 83/112 (74%), Positives = 97/112 (86%)
Frame = -3
Query: 455 ETISLDGDEDQEISSFSNIPEEFFVDMESTWKGRVKRIHAEKAFSEVERAAEALSEAVTE 276
E ISLDG+ DQ+I+S S IP +FF DMES+WKGRVKRIHAE+AF+EVERAA+A S AVTE
Sbjct: 434 EMISLDGENDQKINSSSIIPSDFFEDMESSWKGRVKRIHAEEAFTEVERAADAFSTAVTE 493
Query: 275 DFLPIVSRVKAIMSPLGGPKGEISYAREHEAVWFKGKRFAPSVWSVVLGKNK 120
DFLPIVSR+KA M+PLGGPKGEI YAREHEAVWFKGKRFAP+ W+ G+ +
Sbjct: 494 DFLPIVSRIKATMAPLGGPKGEILYAREHEAVWFKGKRFAPAAWAGTPGEEQ 545
Score = 80.1 bits (196), Expect = 6e-13
Identities = 39/53 (73%), Positives = 42/53 (79%)
Frame = -2
Query: 174 QGKTFCTICVVCSPGEEQIKQLRSATDSKGRKVGEEWFTTSKVENALNRYHEA 16
+GK F +PGEEQIKQLR ATDSKGRKVGEEWFTT KVE+AL RYHEA
Sbjct: 528 KGKRFAPAAWAGTPGEEQIKQLRPATDSKGRKVGEEWFTTKKVEDALIRYHEA 580
>gb|AIU48170.1| MSH1, partial [Illicium henryi]
Length = 760
Score = 173 bits (439), Expect = 4e-41
Identities = 87/129 (67%), Positives = 105/129 (81%), Gaps = 4/129 (3%)
Frame = -3
Query: 455 ETISLDGDEDQEISSFSNIPEEFFVDMESTWKGRVKRIHAEKAFSEVERAAEALSEAVTE 276
E ISL+G+ DQ+ISSF+ IP +FF DMES+WKGRVKR+HAE F+EV+RAAEALS AVTE
Sbjct: 259 EVISLEGETDQKISSFAVIPADFFEDMESSWKGRVKRMHAENCFAEVDRAAEALSLAVTE 318
Query: 275 DFLPIVSRVKAIMSPLGGPKGEISYAREHEAVWFKGKRFAPSVWSVVLG----KNKSNSS 108
DFLPIV RVKA++SP+G PKGEISYA+EHEAVWFKGKRFAPSVW G K +++
Sbjct: 319 DFLPIVLRVKAVVSPIGAPKGEISYAKEHEAVWFKGKRFAPSVWGGTPGEEQIKQLISAT 378
Query: 107 DLRQIQKGE 81
DL+ + GE
Sbjct: 379 DLKGRKVGE 387
Score = 77.8 bits (190), Expect = 3e-12
Identities = 39/53 (73%), Positives = 41/53 (77%)
Frame = -2
Query: 174 QGKTFCTICVVCSPGEEQIKQLRSATDSKGRKVGEEWFTTSKVENALNRYHEA 16
+GK F +PGEEQIKQL SATD KGRKVGEEWFTT KVE ALNRYHEA
Sbjct: 353 KGKRFAPSVWGGTPGEEQIKQLISATDLKGRKVGEEWFTTEKVEEALNRYHEA 405
>ref|XP_008809666.1| PREDICTED: DNA mismatch repair protein MSH1, mitochondrial [Phoenix
dactylifera]
Length = 1138
Score = 171 bits (434), Expect = 1e-40
Identities = 82/112 (73%), Positives = 96/112 (85%)
Frame = -3
Query: 455 ETISLDGDEDQEISSFSNIPEEFFVDMESTWKGRVKRIHAEKAFSEVERAAEALSEAVTE 276
E ISL G+ DQEI+SF IP EFF DMES+W+GRVKRIHAE+AF+EVERAA+ALS AV E
Sbjct: 516 EIISLSGESDQEINSFEFIPREFFEDMESSWRGRVKRIHAEEAFAEVERAAKALSVAVME 575
Query: 275 DFLPIVSRVKAIMSPLGGPKGEISYAREHEAVWFKGKRFAPSVWSVVLGKNK 120
DF PIVSRVK+++SPLGGPKGEI YAREHEAVWFKGKRF P+VW+ G+ +
Sbjct: 576 DFFPIVSRVKSVVSPLGGPKGEICYAREHEAVWFKGKRFMPAVWANTPGEEQ 627
Score = 85.1 bits (209), Expect = 2e-14
Identities = 42/58 (72%), Positives = 46/58 (79%)
Frame = -2
Query: 174 QGKTFCTICVVCSPGEEQIKQLRSATDSKGRKVGEEWFTTSKVENALNRYHEACDGAK 1
+GK F +PGEEQIK+LR ATDSKGRKVGEEWFTT KVE+ALNRYHEA D AK
Sbjct: 610 KGKRFMPAVWANTPGEEQIKKLRHATDSKGRKVGEEWFTTIKVEDALNRYHEASDKAK 667
>gb|AIU48171.1| MSH1, partial [Buxus sinica]
Length = 854
Score = 169 bits (428), Expect = 7e-40
Identities = 81/110 (73%), Positives = 95/110 (86%)
Frame = -3
Query: 449 ISLDGDEDQEISSFSNIPEEFFVDMESTWKGRVKRIHAEKAFSEVERAAEALSEAVTEDF 270
ISLDG+ DQ+ISS + IP EFF DMES+WKGRVKR+HAE+AF+EVE+AAEALS+AV EDF
Sbjct: 261 ISLDGENDQKISSSAIIPSEFFEDMESSWKGRVKRVHAEEAFAEVEKAAEALSKAVMEDF 320
Query: 269 LPIVSRVKAIMSPLGGPKGEISYAREHEAVWFKGKRFAPSVWSVVLGKNK 120
LPIVSR+KA +PLGGPKGEI YAREHEAVWFKGKRF P VW+ G+ +
Sbjct: 321 LPIVSRIKATTAPLGGPKGEILYAREHEAVWFKGKRFTPVVWAGTPGEEQ 370
Score = 73.6 bits (179), Expect = 6e-11
Identities = 35/53 (66%), Positives = 40/53 (75%)
Frame = -2
Query: 174 QGKTFCTICVVCSPGEEQIKQLRSATDSKGRKVGEEWFTTSKVENALNRYHEA 16
+GK F + +PGEEQIK LR A DSKGRKVGEEWFTT KVE+ + RYHEA
Sbjct: 353 KGKRFTPVVWAGTPGEEQIKLLRPAIDSKGRKVGEEWFTTKKVEDGIIRYHEA 405
>gb|AIU48198.1| MSH1, partial [Cinnamomum camphora]
Length = 577
Score = 169 bits (427), Expect = 1e-39
Identities = 85/88 (96%), Positives = 86/88 (97%)
Frame = -3
Query: 455 ETISLDGDEDQEISSFSNIPEEFFVDMESTWKGRVKRIHAEKAFSEVERAAEALSEAVTE 276
ETISLDGDEDQEISSFSNIPEEFFVDMESTWKGRVKR+HAEKAFSEVERAAEALSEAVTE
Sbjct: 259 ETISLDGDEDQEISSFSNIPEEFFVDMESTWKGRVKRMHAEKAFSEVERAAEALSEAVTE 318
Query: 275 DFLPIVSRVKAIMSPLGGPKGEISYARE 192
DFLPIVSRVKAIMSPLGGPKGEISY E
Sbjct: 319 DFLPIVSRVKAIMSPLGGPKGEISYGTE 346
>ref|XP_012487343.1| PREDICTED: DNA mismatch repair protein MSH1, mitochondrial
[Gossypium raimondii] gi|763771221|gb|KJB38436.1|
hypothetical protein B456_006G254800 [Gossypium
raimondii]
Length = 1126
Score = 168 bits (426), Expect = 1e-39
Identities = 79/112 (70%), Positives = 95/112 (84%)
Frame = -3
Query: 455 ETISLDGDEDQEISSFSNIPEEFFVDMESTWKGRVKRIHAEKAFSEVERAAEALSEAVTE 276
+ I LDG+ DQ+ISS++NIP EFF DMES+WKGRVK+IH E+ +EVERAAEALS +TE
Sbjct: 513 QMIFLDGESDQKISSYANIPGEFFEDMESSWKGRVKKIHIEEEVAEVERAAEALSSVITE 572
Query: 275 DFLPIVSRVKAIMSPLGGPKGEISYAREHEAVWFKGKRFAPSVWSVVLGKNK 120
DFLPIVSR+KA +PLGGPKGEI YAREHEAVWFKGKRFAP+VW+ G+ +
Sbjct: 573 DFLPIVSRIKATSAPLGGPKGEILYAREHEAVWFKGKRFAPAVWAGTPGEEQ 624
Score = 76.6 bits (187), Expect = 6e-12
Identities = 39/58 (67%), Positives = 44/58 (75%)
Frame = -2
Query: 174 QGKTFCTICVVCSPGEEQIKQLRSATDSKGRKVGEEWFTTSKVENALNRYHEACDGAK 1
+GK F +PGEEQIKQL+ A DSKGRKVGEEWFTT KVE+AL RYH+A GAK
Sbjct: 607 KGKRFAPAVWAGTPGEEQIKQLKPALDSKGRKVGEEWFTTMKVEDALTRYHDA--GAK 662
>ref|XP_010918844.1| PREDICTED: DNA mismatch repair protein MSH1, mitochondrial [Elaeis
guineensis]
Length = 1134
Score = 168 bits (426), Expect = 1e-39
Identities = 84/127 (66%), Positives = 98/127 (77%)
Frame = -3
Query: 455 ETISLDGDEDQEISSFSNIPEEFFVDMESTWKGRVKRIHAEKAFSEVERAAEALSEAVTE 276
E ISL G+ DQEISSF IP EFF DMES+WKGRVKRIHAE+AF+EVERAA+ALS AV E
Sbjct: 512 EIISLGGESDQEISSFECIPREFFEDMESSWKGRVKRIHAEEAFAEVERAAKALSVAVME 571
Query: 275 DFLPIVSRVKAIMSPLGGPKGEISYAREHEAVWFKGKRFAPSVWSVVLGKNKSNSSDLRQ 96
D PIVSRVK+++S LGGPKGEI YAREHEAVWFKGKRF P+VW+ G+ +
Sbjct: 572 DLFPIVSRVKSVVSSLGGPKGEICYAREHEAVWFKGKRFMPAVWANTPGEEQIKQLRPAM 631
Query: 95 IQKGERL 75
KG ++
Sbjct: 632 DSKGRKV 638
Score = 83.6 bits (205), Expect = 5e-14
Identities = 41/58 (70%), Positives = 44/58 (75%)
Frame = -2
Query: 174 QGKTFCTICVVCSPGEEQIKQLRSATDSKGRKVGEEWFTTSKVENALNRYHEACDGAK 1
+GK F +PGEEQIKQLR A DSKGRKVGEEWFTT K+E ALNRYHEA D AK
Sbjct: 606 KGKRFMPAVWANTPGEEQIKQLRPAMDSKGRKVGEEWFTTIKIEGALNRYHEASDKAK 663
>gb|AIU48167.1| MSH1, partial [Citrus sinensis]
Length = 955
Score = 168 bits (425), Expect = 2e-39
Identities = 80/112 (71%), Positives = 92/112 (82%)
Frame = -3
Query: 455 ETISLDGDEDQEISSFSNIPEEFFVDMESTWKGRVKRIHAEKAFSEVERAAEALSEAVTE 276
E ISLDG+ DQ+I S+ NIP EFF DMESTWKGRVKRIH E +EVE AAEALS AVTE
Sbjct: 432 EMISLDGESDQKICSYDNIPSEFFEDMESTWKGRVKRIHIEPEIAEVEMAAEALSLAVTE 491
Query: 275 DFLPIVSRVKAIMSPLGGPKGEISYAREHEAVWFKGKRFAPSVWSVVLGKNK 120
DFLPI+SR+KA +PLGGPKGEI YAREHEAVWFKGK+F P+VW+ G+ +
Sbjct: 492 DFLPIISRIKATTAPLGGPKGEILYAREHEAVWFKGKKFRPTVWASTPGEEQ 543
Score = 75.5 bits (184), Expect = 1e-11
Identities = 39/58 (67%), Positives = 43/58 (74%)
Frame = -2
Query: 174 QGKTFCTICVVCSPGEEQIKQLRSATDSKGRKVGEEWFTTSKVENALNRYHEACDGAK 1
+GK F +PGEEQIKQL+ A DSKGRKVGEEWF+T KVE AL RYHEA GAK
Sbjct: 526 KGKKFRPTVWASTPGEEQIKQLKPAVDSKGRKVGEEWFSTLKVEEALERYHEA--GAK 581
>gb|AIU48164.1| MSH1, partial [Citrus clementina]
Length = 1034
Score = 168 bits (425), Expect = 2e-39
Identities = 80/112 (71%), Positives = 92/112 (82%)
Frame = -3
Query: 455 ETISLDGDEDQEISSFSNIPEEFFVDMESTWKGRVKRIHAEKAFSEVERAAEALSEAVTE 276
E ISLDG+ DQ+I S+ NIP EFF DMESTWKGRVKRIH E +EVE AAEALS AVTE
Sbjct: 437 EMISLDGESDQKICSYDNIPSEFFEDMESTWKGRVKRIHIEPEIAEVEMAAEALSLAVTE 496
Query: 275 DFLPIVSRVKAIMSPLGGPKGEISYAREHEAVWFKGKRFAPSVWSVVLGKNK 120
DFLPI+SR+KA +PLGGPKGEI YAREHEAVWFKGK+F P+VW+ G+ +
Sbjct: 497 DFLPIISRIKATTAPLGGPKGEILYAREHEAVWFKGKKFRPTVWASTPGEEQ 548
Score = 75.5 bits (184), Expect = 1e-11
Identities = 39/58 (67%), Positives = 43/58 (74%)
Frame = -2
Query: 174 QGKTFCTICVVCSPGEEQIKQLRSATDSKGRKVGEEWFTTSKVENALNRYHEACDGAK 1
+GK F +PGEEQIKQL+ A DSKGRKVGEEWF+T KVE AL RYHEA GAK
Sbjct: 531 KGKKFRPTVWASTPGEEQIKQLKPAVDSKGRKVGEEWFSTLKVEEALERYHEA--GAK 586
>gb|KDO52258.1| hypothetical protein CISIN_1g0015701mg, partial [Citrus sinensis]
gi|641833242|gb|KDO52259.1| hypothetical protein
CISIN_1g0015701mg, partial [Citrus sinensis]
gi|641833243|gb|KDO52260.1| hypothetical protein
CISIN_1g0015701mg, partial [Citrus sinensis]
gi|641833244|gb|KDO52261.1| hypothetical protein
CISIN_1g0015701mg, partial [Citrus sinensis]
Length = 609
Score = 168 bits (425), Expect = 2e-39
Identities = 80/112 (71%), Positives = 92/112 (82%)
Frame = -3
Query: 455 ETISLDGDEDQEISSFSNIPEEFFVDMESTWKGRVKRIHAEKAFSEVERAAEALSEAVTE 276
E ISLDG+ DQ+I S+ NIP EFF DMESTWKGRVKRIH E +EVE AAEALS AVTE
Sbjct: 71 EMISLDGESDQKICSYDNIPSEFFEDMESTWKGRVKRIHIEPEIAEVEMAAEALSLAVTE 130
Query: 275 DFLPIVSRVKAIMSPLGGPKGEISYAREHEAVWFKGKRFAPSVWSVVLGKNK 120
DFLPI+SR+KA +PLGGPKGEI YAREHEAVWFKGK+F P+VW+ G+ +
Sbjct: 131 DFLPIISRIKATTAPLGGPKGEILYAREHEAVWFKGKKFRPTVWASTPGEEQ 182
Score = 75.5 bits (184), Expect = 1e-11
Identities = 39/58 (67%), Positives = 43/58 (74%)
Frame = -2
Query: 174 QGKTFCTICVVCSPGEEQIKQLRSATDSKGRKVGEEWFTTSKVENALNRYHEACDGAK 1
+GK F +PGEEQIKQL+ A DSKGRKVGEEWF+T KVE AL RYHEA GAK
Sbjct: 165 KGKKFRPTVWASTPGEEQIKQLKPAVDSKGRKVGEEWFSTLKVEEALERYHEA--GAK 220
>ref|XP_006480236.1| PREDICTED: DNA mismatch repair protein MSH1, mitochondrial-like
isoform X2 [Citrus sinensis]
Length = 782
Score = 168 bits (425), Expect = 2e-39
Identities = 80/112 (71%), Positives = 92/112 (82%)
Frame = -3
Query: 455 ETISLDGDEDQEISSFSNIPEEFFVDMESTWKGRVKRIHAEKAFSEVERAAEALSEAVTE 276
E ISLDG+ DQ+I S+ NIP EFF DMESTWKGRVKRIH E +EVE AAEALS AVTE
Sbjct: 518 EMISLDGESDQKICSYDNIPSEFFEDMESTWKGRVKRIHIEPEIAEVEMAAEALSLAVTE 577
Query: 275 DFLPIVSRVKAIMSPLGGPKGEISYAREHEAVWFKGKRFAPSVWSVVLGKNK 120
DFLPI+SR+KA +PLGGPKGEI YAREHEAVWFKGK+F P+VW+ G+ +
Sbjct: 578 DFLPIISRIKATTAPLGGPKGEILYAREHEAVWFKGKKFRPTVWASTPGEEQ 629
Score = 75.5 bits (184), Expect = 1e-11
Identities = 39/58 (67%), Positives = 43/58 (74%)
Frame = -2
Query: 174 QGKTFCTICVVCSPGEEQIKQLRSATDSKGRKVGEEWFTTSKVENALNRYHEACDGAK 1
+GK F +PGEEQIKQL+ A DSKGRKVGEEWF+T KVE AL RYHEA GAK
Sbjct: 612 KGKKFRPTVWASTPGEEQIKQLKPAVDSKGRKVGEEWFSTLKVEEALERYHEA--GAK 667
>ref|XP_006480235.1| PREDICTED: DNA mismatch repair protein MSH1, mitochondrial-like
isoform X1 [Citrus sinensis]
Length = 1137
Score = 168 bits (425), Expect = 2e-39
Identities = 80/112 (71%), Positives = 92/112 (82%)
Frame = -3
Query: 455 ETISLDGDEDQEISSFSNIPEEFFVDMESTWKGRVKRIHAEKAFSEVERAAEALSEAVTE 276
E ISLDG+ DQ+I S+ NIP EFF DMESTWKGRVKRIH E +EVE AAEALS AVTE
Sbjct: 518 EMISLDGESDQKICSYDNIPSEFFEDMESTWKGRVKRIHIEPEIAEVEMAAEALSLAVTE 577
Query: 275 DFLPIVSRVKAIMSPLGGPKGEISYAREHEAVWFKGKRFAPSVWSVVLGKNK 120
DFLPI+SR+KA +PLGGPKGEI YAREHEAVWFKGK+F P+VW+ G+ +
Sbjct: 578 DFLPIISRIKATTAPLGGPKGEILYAREHEAVWFKGKKFRPTVWASTPGEEQ 629
Score = 75.5 bits (184), Expect = 1e-11
Identities = 39/58 (67%), Positives = 43/58 (74%)
Frame = -2
Query: 174 QGKTFCTICVVCSPGEEQIKQLRSATDSKGRKVGEEWFTTSKVENALNRYHEACDGAK 1
+GK F +PGEEQIKQL+ A DSKGRKVGEEWF+T KVE AL RYHEA GAK
Sbjct: 612 KGKKFRPTVWASTPGEEQIKQLKPAVDSKGRKVGEEWFSTLKVEEALERYHEA--GAK 667
>ref|XP_006420382.1| hypothetical protein CICLE_v10004190mg [Citrus clementina]
gi|557522255|gb|ESR33622.1| hypothetical protein
CICLE_v10004190mg [Citrus clementina]
Length = 581
Score = 168 bits (425), Expect = 2e-39
Identities = 80/112 (71%), Positives = 92/112 (82%)
Frame = -3
Query: 455 ETISLDGDEDQEISSFSNIPEEFFVDMESTWKGRVKRIHAEKAFSEVERAAEALSEAVTE 276
E ISLDG+ DQ+I S+ NIP EFF DMESTWKGRVKRIH E +EVE AAEALS AVTE
Sbjct: 270 EMISLDGESDQKICSYDNIPSEFFEDMESTWKGRVKRIHIEPEIAEVEMAAEALSLAVTE 329
Query: 275 DFLPIVSRVKAIMSPLGGPKGEISYAREHEAVWFKGKRFAPSVWSVVLGKNK 120
DFLPI+SR+KA +PLGGPKGEI YAREHEAVWFKGK+F P+VW+ G+ +
Sbjct: 330 DFLPIISRIKATTAPLGGPKGEILYAREHEAVWFKGKKFRPTVWASTPGEEQ 381
Score = 75.5 bits (184), Expect = 1e-11
Identities = 39/58 (67%), Positives = 43/58 (74%)
Frame = -2
Query: 174 QGKTFCTICVVCSPGEEQIKQLRSATDSKGRKVGEEWFTTSKVENALNRYHEACDGAK 1
+GK F +PGEEQIKQL+ A DSKGRKVGEEWF+T KVE AL RYHEA GAK
Sbjct: 364 KGKKFRPTVWASTPGEEQIKQLKPAVDSKGRKVGEEWFSTLKVEEALERYHEA--GAK 419