BLASTX nr result

ID: Cinnamomum24_contig00027154 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cinnamomum24_contig00027154
         (325 letters)

Database: ./nr 
           77,306,371 sequences; 28,104,191,420 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_010268710.1| PREDICTED: sodium channel modifier 1-like is...    59   1e-06
ref|XP_010268709.1| PREDICTED: sodium channel modifier 1-like is...    59   1e-06
ref|XP_010268708.1| PREDICTED: sodium channel modifier 1-like is...    59   1e-06
ref|XP_010268707.1| PREDICTED: sodium channel modifier 1-like is...    59   1e-06

>ref|XP_010268710.1| PREDICTED: sodium channel modifier 1-like isoform X4 [Nelumbo
           nucifera]
          Length = 204

 Score = 59.3 bits (142), Expect = 1e-06
 Identities = 41/103 (39%), Positives = 57/103 (55%), Gaps = 1/103 (0%)
 Frame = -1

Query: 307 STQQFKSSSKPLIERTRKAAFETLKHQTHEQNDVNYCYDIK-SKQHPYFFSPKSQPASKE 131
           S+QQ K ++KPLIERTRKA  E + +QT +Q   N  Y+ K SK    FF+ K      +
Sbjct: 66  SSQQLKINNKPLIERTRKATSEMIYNQTLDQYATNEDYNTKFSKGGTSFFATKFPTVPTQ 125

Query: 130 RLELSPSVKPESGKSDERNNTSRPSGEAGKMLAEQMMELQKRR 2
           R+E S +VK ES  S   N +   +  +  M   Q +EL +RR
Sbjct: 126 RVESSLTVKSESSNS---NKSGCETESSSMMPIHQKLELCERR 165


>ref|XP_010268709.1| PREDICTED: sodium channel modifier 1-like isoform X3 [Nelumbo
           nucifera]
          Length = 233

 Score = 59.3 bits (142), Expect = 1e-06
 Identities = 41/103 (39%), Positives = 57/103 (55%), Gaps = 1/103 (0%)
 Frame = -1

Query: 307 STQQFKSSSKPLIERTRKAAFETLKHQTHEQNDVNYCYDIK-SKQHPYFFSPKSQPASKE 131
           S+QQ K ++KPLIERTRKA  E + +QT +Q   N  Y+ K SK    FF+ K      +
Sbjct: 95  SSQQLKINNKPLIERTRKATSEMIYNQTLDQYATNEDYNTKFSKGGTSFFATKFPTVPTQ 154

Query: 130 RLELSPSVKPESGKSDERNNTSRPSGEAGKMLAEQMMELQKRR 2
           R+E S +VK ES  S   N +   +  +  M   Q +EL +RR
Sbjct: 155 RVESSLTVKSESSNS---NKSGCETESSSMMPIHQKLELCERR 194


>ref|XP_010268708.1| PREDICTED: sodium channel modifier 1-like isoform X2 [Nelumbo
           nucifera]
          Length = 252

 Score = 59.3 bits (142), Expect = 1e-06
 Identities = 41/103 (39%), Positives = 57/103 (55%), Gaps = 1/103 (0%)
 Frame = -1

Query: 307 STQQFKSSSKPLIERTRKAAFETLKHQTHEQNDVNYCYDIK-SKQHPYFFSPKSQPASKE 131
           S+QQ K ++KPLIERTRKA  E + +QT +Q   N  Y+ K SK    FF+ K      +
Sbjct: 114 SSQQLKINNKPLIERTRKATSEMIYNQTLDQYATNEDYNTKFSKGGTSFFATKFPTVPTQ 173

Query: 130 RLELSPSVKPESGKSDERNNTSRPSGEAGKMLAEQMMELQKRR 2
           R+E S +VK ES  S   N +   +  +  M   Q +EL +RR
Sbjct: 174 RVESSLTVKSESSNS---NKSGCETESSSMMPIHQKLELCERR 213


>ref|XP_010268707.1| PREDICTED: sodium channel modifier 1-like isoform X1 [Nelumbo
           nucifera]
          Length = 258

 Score = 59.3 bits (142), Expect = 1e-06
 Identities = 41/103 (39%), Positives = 57/103 (55%), Gaps = 1/103 (0%)
 Frame = -1

Query: 307 STQQFKSSSKPLIERTRKAAFETLKHQTHEQNDVNYCYDIK-SKQHPYFFSPKSQPASKE 131
           S+QQ K ++KPLIERTRKA  E + +QT +Q   N  Y+ K SK    FF+ K      +
Sbjct: 120 SSQQLKINNKPLIERTRKATSEMIYNQTLDQYATNEDYNTKFSKGGTSFFATKFPTVPTQ 179

Query: 130 RLELSPSVKPESGKSDERNNTSRPSGEAGKMLAEQMMELQKRR 2
           R+E S +VK ES  S   N +   +  +  M   Q +EL +RR
Sbjct: 180 RVESSLTVKSESSNS---NKSGCETESSSMMPIHQKLELCERR 219


Top