BLASTX nr result
ID: Cinnamomum24_contig00026903
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Cinnamomum24_contig00026903
(243 letters)
Database: ./nr
77,306,371 sequences; 28,104,191,420 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_009592880.1| PREDICTED: cytochrome b6-f complex iron-sulf... 70 5e-10
gb|AFW90568.1| putative Rieske Fe-S protein precursor [Solanum t... 70 6e-10
sp|P30361.2|UCRIA_TOBAC RecName: Full=Cytochrome b6-f complex ir... 69 1e-09
emb|CAA45705.1| Rieske Fe/S protein of cytochrome b6/f complex [... 69 1e-09
ref|NP_001274885.1| cytochrome b6-f complex iron-sulfur subunit,... 69 2e-09
ref|XP_009777087.1| PREDICTED: cytochrome b6-f complex iron-sulf... 68 3e-09
ref|XP_004251502.1| PREDICTED: cytochrome b6-f complex iron-sulf... 68 3e-09
ref|XP_010277891.1| PREDICTED: cytochrome b6-f complex iron-sulf... 67 5e-09
emb|CDP11894.1| unnamed protein product [Coffea canephora] 65 3e-08
ref|XP_011079046.1| PREDICTED: cytochrome b6-f complex iron-sulf... 64 6e-08
ref|XP_002325684.1| PHOTOSYNTHETIC ELECTRON TRANSFER C family pr... 61 4e-07
ref|XP_010095858.1| Cytochrome b6-f complex iron-sulfur subunit ... 60 6e-07
ref|XP_011047491.1| PREDICTED: cytochrome b6-f complex iron-sulf... 60 8e-07
ref|XP_002319934.1| PHOTOSYNTHETIC ELECTRON TRANSFER C family pr... 59 1e-06
ref|XP_011048475.1| PREDICTED: cytochrome b6-f complex iron-sulf... 59 1e-06
ref|XP_009420689.1| PREDICTED: cytochrome b6-f complex iron-sulf... 59 1e-06
ref|XP_012852450.1| PREDICTED: cytochrome b6-f complex iron-sulf... 57 5e-06
gb|AKT73408.1| Rieske iron-sulfur protein precursor, partial [Lu... 57 7e-06
ref|XP_007043436.1| Photosynthetic electron transfer C [Theobrom... 57 7e-06
>ref|XP_009592880.1| PREDICTED: cytochrome b6-f complex iron-sulfur subunit 1,
chloroplastic [Nicotiana tomentosiformis]
Length = 228
Score = 70.5 bits (171), Expect = 5e-10
Identities = 42/82 (51%), Positives = 49/82 (59%), Gaps = 2/82 (2%)
Frame = -2
Query: 242 KNGMNSPSQAALVKFVRSN-HGAQKENRMSVSCMA-SIPADDRVPDMGKREXXXXXXXXX 69
K+G++S SQ LVK ++ N HG K+ RM V CMA SIPADDRVPDM KR
Sbjct: 16 KSGLSSVSQCLLVKPMKINSHGLGKDKRMKVKCMATSIPADDRVPDMEKRNLMNLLLLGA 75
Query: 68 XXXXXXXXXXPYASFFVPPGSG 3
PYA+FFVPPGSG
Sbjct: 76 LSLPTAGMLVPYATFFVPPGSG 97
>gb|AFW90568.1| putative Rieske Fe-S protein precursor [Solanum tuberosum]
Length = 230
Score = 70.1 bits (170), Expect = 6e-10
Identities = 42/82 (51%), Positives = 49/82 (59%), Gaps = 2/82 (2%)
Frame = -2
Query: 242 KNGMNSPSQAALVKFVRSN-HGAQKENRMSVSCMA-SIPADDRVPDMGKREXXXXXXXXX 69
K+G++S SQA LVK ++ N HG K+ RM V CMA SIPADDRVPDM KR
Sbjct: 18 KSGVSSVSQALLVKPMKINGHGMGKDKRMKVKCMAASIPADDRVPDMEKRNLMNLLLLGA 77
Query: 68 XXXXXXXXXXPYASFFVPPGSG 3
PYA+FF PPGSG
Sbjct: 78 PALPTGGMLVPYATFFAPPGSG 99
>sp|P30361.2|UCRIA_TOBAC RecName: Full=Cytochrome b6-f complex iron-sulfur subunit 1,
chloroplastic; AltName:
Full=Plastohydroquinone:plastocyanin oxidoreductase
iron-sulfur protein 1; AltName: Full=Rieske iron-sulfur
protein 1; Short=ISP 1; Short=RISP 1; Flags: Precursor
gi|19995|emb|CAA46808.1| Rieske FeS [Nicotiana tabacum]
Length = 228
Score = 68.9 bits (167), Expect = 1e-09
Identities = 41/82 (50%), Positives = 48/82 (58%), Gaps = 2/82 (2%)
Frame = -2
Query: 242 KNGMNSPSQAALVKFVRSN-HGAQKENRMSVSCMA-SIPADDRVPDMGKREXXXXXXXXX 69
K+G++S SQ LVK ++ N HG K+ RM V CMA SIPADDRVPDM KR
Sbjct: 16 KSGLSSVSQCLLVKPMKINSHGLGKDKRMKVKCMATSIPADDRVPDMEKRNLMNLLLLGA 75
Query: 68 XXXXXXXXXXPYASFFVPPGSG 3
PY +FFVPPGSG
Sbjct: 76 LSLPTAGMLVPYGTFFVPPGSG 97
>emb|CAA45705.1| Rieske Fe/S protein of cytochrome b6/f complex [Nicotiana tabacum]
Length = 228
Score = 68.9 bits (167), Expect = 1e-09
Identities = 40/82 (48%), Positives = 47/82 (57%), Gaps = 2/82 (2%)
Frame = -2
Query: 242 KNGMNSPSQAALVKFVRSN-HGAQKENRMSVSCMA-SIPADDRVPDMGKREXXXXXXXXX 69
K+G++S SQ LVK ++ N HG K+ RM V CMA SIPADDRVPDM KR
Sbjct: 16 KSGLSSVSQCLLVKPMKINSHGLGKDKRMKVKCMATSIPADDRVPDMEKRNLMNLLLLGA 75
Query: 68 XXXXXXXXXXPYASFFVPPGSG 3
Y +FFVPPGSG
Sbjct: 76 LSLPTAGMLVSYGTFFVPPGSG 97
>ref|NP_001274885.1| cytochrome b6-f complex iron-sulfur subunit, chloroplastic [Solanum
tuberosum] gi|68566175|sp|Q69GY7.1|UCRIA_SOLTU RecName:
Full=Cytochrome b6-f complex iron-sulfur subunit,
chloroplastic; AltName:
Full=Plastohydroquinone:plastocyanin oxidoreductase
iron-sulfur protein; AltName: Full=Rieske iron-sulfur
protein; Short=ISP; Short=RISP; Flags: Precursor
gi|37222949|gb|AAQ90151.1| putative Rieske Fe-S protein
precursor [Solanum tuberosum]
Length = 230
Score = 68.6 bits (166), Expect = 2e-09
Identities = 41/82 (50%), Positives = 48/82 (58%), Gaps = 2/82 (2%)
Frame = -2
Query: 242 KNGMNSPSQAALVKFVRSN-HGAQKENRMSVSCMA-SIPADDRVPDMGKREXXXXXXXXX 69
K+G++S SQA LVK ++ N HG K+ RM CMA SIPADDRVPDM KR
Sbjct: 18 KSGVSSVSQALLVKPMKINGHGMGKDKRMKAKCMAASIPADDRVPDMEKRNLMNLLLLGA 77
Query: 68 XXXXXXXXXXPYASFFVPPGSG 3
PYA+FF PPGSG
Sbjct: 78 LALPTGGMLVPYATFFAPPGSG 99
>ref|XP_009777087.1| PREDICTED: cytochrome b6-f complex iron-sulfur subunit 2,
chloroplastic [Nicotiana sylvestris]
gi|401249|sp|Q02585.1|UCRIB_TOBAC RecName:
Full=Cytochrome b6-f complex iron-sulfur subunit 2,
chloroplastic; AltName:
Full=Plastohydroquinone:plastocyanin oxidoreductase
iron-sulfur protein 2; AltName: Full=Rieske iron-sulfur
protein 2; Short=ISP 2; Short=RISP 2; Flags: Precursor
gi|19997|emb|CAA46809.1| Rieske FeS [Nicotiana tabacum]
Length = 228
Score = 67.8 bits (164), Expect = 3e-09
Identities = 40/82 (48%), Positives = 48/82 (58%), Gaps = 2/82 (2%)
Frame = -2
Query: 242 KNGMNSPSQAALVKFVRSN-HGAQKENRMSVSCMA-SIPADDRVPDMGKREXXXXXXXXX 69
K+G++S SQ L+K ++ N HG K+ RM V CMA SIPADDRVPDM KR
Sbjct: 16 KSGLSSVSQCLLLKPMKINSHGLGKDKRMKVKCMATSIPADDRVPDMEKRNLMNLLLLGA 75
Query: 68 XXXXXXXXXXPYASFFVPPGSG 3
PYA+FF PPGSG
Sbjct: 76 LSLPTAGMLVPYATFFAPPGSG 97
>ref|XP_004251502.1| PREDICTED: cytochrome b6-f complex iron-sulfur subunit,
chloroplastic [Solanum lycopersicum]
Length = 231
Score = 67.8 bits (164), Expect = 3e-09
Identities = 43/83 (51%), Positives = 50/83 (60%), Gaps = 3/83 (3%)
Frame = -2
Query: 242 KNGMNSPSQAALVKFVRSN-HGAQKEN-RMSVSCMA-SIPADDRVPDMGKREXXXXXXXX 72
K+G++S SQA LVK ++ N HG K+N RM V CMA SIPADDRVPDM KR
Sbjct: 18 KSGISSVSQALLVKPMKINGHGMGKDNKRMKVKCMAASIPADDRVPDMEKRNLMNLLLLG 77
Query: 71 XXXXXXXXXXXPYASFFVPPGSG 3
PYA+FF PPGSG
Sbjct: 78 ALALPTGGMLVPYATFFAPPGSG 100
>ref|XP_010277891.1| PREDICTED: cytochrome b6-f complex iron-sulfur subunit 2,
chloroplastic [Nelumbo nucifera]
Length = 228
Score = 67.0 bits (162), Expect = 5e-09
Identities = 39/81 (48%), Positives = 48/81 (59%), Gaps = 1/81 (1%)
Frame = -2
Query: 242 KNGMNSPSQAALVKFVRSNHGAQKENRMSVSCMA-SIPADDRVPDMGKREXXXXXXXXXX 66
K+GM SPSQA +VK ++ H KE + ++C A S+PADDRVPDMGKR+
Sbjct: 18 KSGMFSPSQALMVKPTKT-HLLGKEKMVRITCQATSVPADDRVPDMGKRQLMNLLLLGAI 76
Query: 65 XXXXXXXXXPYASFFVPPGSG 3
PYASFF PPGSG
Sbjct: 77 SLPTAGMLVPYASFFAPPGSG 97
>emb|CDP11894.1| unnamed protein product [Coffea canephora]
Length = 232
Score = 64.7 bits (156), Expect = 3e-08
Identities = 41/84 (48%), Positives = 48/84 (57%), Gaps = 4/84 (4%)
Frame = -2
Query: 242 KNGMNSPSQAALVK--FVRSNH-GAQKENRMSVSCMA-SIPADDRVPDMGKREXXXXXXX 75
K+ M PSQ+ +K +RS G K+ RM VSCMA S+PADDRVPDMGKRE
Sbjct: 18 KSSMYCPSQSLFLKPMMMRSGKLGWGKDKRMKVSCMATSVPADDRVPDMGKRELMNLLLL 77
Query: 74 XXXXXXXXXXXXPYASFFVPPGSG 3
PYA+FFVPPG G
Sbjct: 78 GAVSLPTAIMVVPYAAFFVPPGLG 101
>ref|XP_011079046.1| PREDICTED: cytochrome b6-f complex iron-sulfur subunit 1,
chloroplastic-like [Sesamum indicum]
Length = 224
Score = 63.5 bits (153), Expect = 6e-08
Identities = 39/79 (49%), Positives = 42/79 (53%), Gaps = 1/79 (1%)
Frame = -2
Query: 242 KNGMNSPSQAALVKFVRSNHGAQKENRMSVSCMA-SIPADDRVPDMGKREXXXXXXXXXX 66
KNGMNS S AL K V + RM VSCMA S+PADDRVPDMGKR+
Sbjct: 20 KNGMNSTSHVALAKCVNNK-------RMKVSCMATSVPADDRVPDMGKRQLMNLLLLGAI 72
Query: 65 XXXXXXXXXPYASFFVPPG 9
PY FFVPPG
Sbjct: 73 SLPSGGMLLPYTYFFVPPG 91
>ref|XP_002325684.1| PHOTOSYNTHETIC ELECTRON TRANSFER C family protein [Populus
trichocarpa] gi|118486166|gb|ABK94926.1| unknown
[Populus trichocarpa] gi|118487342|gb|ABK95499.1|
unknown [Populus trichocarpa]
gi|222862559|gb|EEF00066.1| PHOTOSYNTHETIC ELECTRON
TRANSFER C family protein [Populus trichocarpa]
Length = 228
Score = 60.8 bits (146), Expect = 4e-07
Identities = 38/81 (46%), Positives = 43/81 (53%), Gaps = 1/81 (1%)
Frame = -2
Query: 242 KNGMNSPSQAALVKFVRSNHGAQKENRMSVSCMA-SIPADDRVPDMGKREXXXXXXXXXX 66
K+GM SP+ A VK R+N KE M +SC A S+PADDRVPDMGKRE
Sbjct: 18 KSGMFSPTHAVFVKPTRTNM-VLKERGMRISCQATSVPADDRVPDMGKRELMNLLLLGAL 76
Query: 65 XXXXXXXXXPYASFFVPPGSG 3
PY FFVP G G
Sbjct: 77 SLPTAGMLVPYTYFFVPTGLG 97
>ref|XP_010095858.1| Cytochrome b6-f complex iron-sulfur subunit [Morus notabilis]
gi|587873124|gb|EXB62326.1| Cytochrome b6-f complex
iron-sulfur subunit [Morus notabilis]
Length = 232
Score = 60.1 bits (144), Expect = 6e-07
Identities = 37/82 (45%), Positives = 43/82 (52%), Gaps = 2/82 (2%)
Frame = -2
Query: 242 KNGMNSPSQAALVK-FVRSNHGAQKENRMSVSCMA-SIPADDRVPDMGKREXXXXXXXXX 69
K+ M PS A LVK +S K M ++C A S+PADDRVPDMGKR+
Sbjct: 18 KSSMFCPSHAFLVKPAAKSQSAVVKGKGMRIACQATSVPADDRVPDMGKRQLLNLLLLGA 77
Query: 68 XXXXXXXXXXPYASFFVPPGSG 3
PYASFF PPGSG
Sbjct: 78 ISLPSAGMLIPYASFFAPPGSG 99
>ref|XP_011047491.1| PREDICTED: cytochrome b6-f complex iron-sulfur subunit,
chloroplastic-like [Populus euphratica]
Length = 228
Score = 59.7 bits (143), Expect = 8e-07
Identities = 37/81 (45%), Positives = 43/81 (53%), Gaps = 1/81 (1%)
Frame = -2
Query: 242 KNGMNSPSQAALVKFVRSNHGAQKENRMSVSCMA-SIPADDRVPDMGKREXXXXXXXXXX 66
K+GM SP+ A VK R+N KE M +SC A S+PADDRVPDMGKR+
Sbjct: 18 KSGMFSPTHAVFVKPTRTNM-VLKERGMRISCQATSVPADDRVPDMGKRQLMNLLLLGAI 76
Query: 65 XXXXXXXXXPYASFFVPPGSG 3
PY FFVP G G
Sbjct: 77 SLPTAGMLVPYTYFFVPSGLG 97
>ref|XP_002319934.1| PHOTOSYNTHETIC ELECTRON TRANSFER C family protein [Populus
trichocarpa] gi|222858310|gb|EEE95857.1| PHOTOSYNTHETIC
ELECTRON TRANSFER C family protein [Populus trichocarpa]
Length = 228
Score = 59.3 bits (142), Expect = 1e-06
Identities = 38/81 (46%), Positives = 43/81 (53%), Gaps = 1/81 (1%)
Frame = -2
Query: 242 KNGMNSPSQAALVKFVRSNHGAQKENRMSVSCMA-SIPADDRVPDMGKREXXXXXXXXXX 66
K+GM SP+ AA VK R+N KE M ++C A SIPADD VPDMGKRE
Sbjct: 18 KSGMFSPTHAAFVKPARTNM-VTKEKGMRIACQATSIPADDGVPDMGKRELMNLLLLGAL 76
Query: 65 XXXXXXXXXPYASFFVPPGSG 3
PY FFVP G G
Sbjct: 77 SLPTAGMLIPYTYFFVPSGLG 97
>ref|XP_011048475.1| PREDICTED: cytochrome b6-f complex iron-sulfur subunit,
chloroplastic-like [Populus euphratica]
Length = 228
Score = 58.9 bits (141), Expect = 1e-06
Identities = 37/81 (45%), Positives = 44/81 (54%), Gaps = 1/81 (1%)
Frame = -2
Query: 242 KNGMNSPSQAALVKFVRSNHGAQKENRMSVSCMA-SIPADDRVPDMGKREXXXXXXXXXX 66
K+GM SP+ AA VK R++ KE M ++C A SIPADDRVPDMGKR+
Sbjct: 18 KSGMFSPTHAAFVKPARTSM-VTKERGMRIACQATSIPADDRVPDMGKRQLMNLLLVGAL 76
Query: 65 XXXXXXXXXPYASFFVPPGSG 3
PY FFVP G G
Sbjct: 77 SLPTAGMLIPYTYFFVPAGLG 97
>ref|XP_009420689.1| PREDICTED: cytochrome b6-f complex iron-sulfur subunit,
chloroplastic-like [Musa acuminata subsp. malaccensis]
Length = 97
Score = 58.9 bits (141), Expect = 1e-06
Identities = 38/79 (48%), Positives = 44/79 (55%), Gaps = 1/79 (1%)
Frame = -2
Query: 242 KNGMNSPSQAALVKFVRSNHGAQKENRMSVSCMA-SIPADDRVPDMGKREXXXXXXXXXX 66
KNGM+SPS A L K VR G KE +++C A SIPAD RVPDMGKR+
Sbjct: 20 KNGMSSPSGALLCKPVRGLPGLGKERSRTITCQATSIPAD-RVPDMGKRQLMNLLLLGAV 78
Query: 65 XXXXXXXXXPYASFFVPPG 9
PY+SFFVP G
Sbjct: 79 SLPTAGMLIPYSSFFVPGG 97
>ref|XP_012852450.1| PREDICTED: cytochrome b6-f complex iron-sulfur subunit 2,
chloroplastic [Erythranthe guttatus]
gi|604305756|gb|EYU24844.1| hypothetical protein
MIMGU_mgv1a013262mg [Erythranthe guttata]
Length = 226
Score = 57.0 bits (136), Expect = 5e-06
Identities = 41/82 (50%), Positives = 46/82 (56%), Gaps = 2/82 (2%)
Frame = -2
Query: 242 KNGMNSPS-QAALVKFVRSNHGAQKENRMSVSCMA-SIPADDRVPDMGKREXXXXXXXXX 69
KNGM++ S +AAL K VR+ K+ RM V CMA SIPAD RVPDMGKRE
Sbjct: 19 KNGMSASSTRAALAKCVRNG----KDMRMKVRCMATSIPAD-RVPDMGKRELMNLLLLGA 73
Query: 68 XXXXXXXXXXPYASFFVPPGSG 3
PY F VPPGSG
Sbjct: 74 LALPTGGMLFPYTYFLVPPGSG 95
>gb|AKT73408.1| Rieske iron-sulfur protein precursor, partial [Lumnitzera littorea]
Length = 122
Score = 56.6 bits (135), Expect = 7e-06
Identities = 35/81 (43%), Positives = 44/81 (54%), Gaps = 1/81 (1%)
Frame = -2
Query: 242 KNGMNSPSQAALVKFVRSNHGAQKENRMSVSCMA-SIPADDRVPDMGKREXXXXXXXXXX 66
K+ M SPSQ LVK R+ ++ + + C A S+PAD+RVPDMGKR+
Sbjct: 6 KSAMFSPSQV-LVKASRTRLLSKDKGMRRIKCQATSVPADERVPDMGKRQLMNLLLLGTV 64
Query: 65 XXXXXXXXXPYASFFVPPGSG 3
PYASFF PPGSG
Sbjct: 65 SLPTAIMLVPYASFFAPPGSG 85
>ref|XP_007043436.1| Photosynthetic electron transfer C [Theobroma cacao]
gi|508707371|gb|EOX99267.1| Photosynthetic electron
transfer C [Theobroma cacao]
Length = 228
Score = 56.6 bits (135), Expect = 7e-06
Identities = 35/79 (44%), Positives = 44/79 (55%), Gaps = 1/79 (1%)
Frame = -2
Query: 242 KNGMNSPSQAALVKFVRSNHGAQKENRMSVSCMA-SIPADDRVPDMGKREXXXXXXXXXX 66
K+G+ PSQA LVK R+ +K+ M ++C A SIPADDRVPDMGKR+
Sbjct: 18 KSGLFCPSQALLVKPTRTQM-VKKDKGMRLTCQATSIPADDRVPDMGKRQLMNLLLLGAV 76
Query: 65 XXXXXXXXXPYASFFVPPG 9
PY +FFVP G
Sbjct: 77 SLPSGFMLVPYGAFFVPAG 95