BLASTX nr result

ID: Cinnamomum24_contig00026722 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cinnamomum24_contig00026722
         (406 letters)

Database: ./nr 
           77,306,371 sequences; 28,104,191,420 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_010276521.1| PREDICTED: probable beta-1,3-galactosyltrans...    70   5e-10
ref|XP_006841581.1| PREDICTED: probable beta-1,3-galactosyltrans...    69   1e-09
ref|XP_006378558.1| hypothetical protein POPTR_0010s16150g [Popu...    56   9e-06

>ref|XP_010276521.1| PREDICTED: probable beta-1,3-galactosyltransferase 16 [Nelumbo
           nucifera] gi|720066445|ref|XP_010276522.1| PREDICTED:
           probable beta-1,3-galactosyltransferase 16 [Nelumbo
           nucifera]
          Length = 635

 Score = 70.5 bits (171), Expect = 5e-10
 Identities = 40/105 (38%), Positives = 51/105 (48%)
 Frame = -2

Query: 315 MKKWSGGTXXXXXXXXXXLRYSFMDTPXXXXXXXXXXXXXSNIVSHVGGNHIARGPRPTD 136
           MKKW+GGT          LRYS M                 +  S +G N + R  +   
Sbjct: 1   MKKWTGGTLIISLAMILILRYSLMQDQPKKQSAYDFFWNHPSNNSRLGHNGVTRTSQLPQ 60

Query: 135 AFNHLNKAQLVTIEGINDLYSFTNISEHDSRVKLVWDQMHYLISR 1
             N   K  L+ ++G+NDLYS  NISE DS+V LVW QM  L+SR
Sbjct: 61  ERNRARKPYLINVDGLNDLYSLKNISEEDSKVVLVWAQMRSLLSR 105


>ref|XP_006841581.1| PREDICTED: probable beta-1,3-galactosyltransferase 16 [Amborella
           trichopoda] gi|548843602|gb|ERN03256.1| hypothetical
           protein AMTR_s00003p00196180 [Amborella trichopoda]
          Length = 639

 Score = 69.3 bits (168), Expect = 1e-09
 Identities = 39/105 (37%), Positives = 54/105 (51%)
 Frame = -2

Query: 315 MKKWSGGTXXXXXXXXXXLRYSFMDTPXXXXXXXXXXXXXSNIVSHVGGNHIARGPRPTD 136
           MKKW+GGT          LRYS M++P             S     +  ++I    +P +
Sbjct: 1   MKKWTGGTLIVILALVLVLRYSLMESPPQNDSPSTFFKNLSKESPPMKAHNIDNRSKPME 60

Query: 135 AFNHLNKAQLVTIEGINDLYSFTNISEHDSRVKLVWDQMHYLISR 1
             +H  K  +V +EGI+ L+S  NISE +S VK+ W QM YLISR
Sbjct: 61  RVSHAKKPHIVNLEGIDYLFSSDNISEKESMVKITWAQMRYLISR 105


>ref|XP_006378558.1| hypothetical protein POPTR_0010s16150g [Populus trichocarpa]
           gi|550329919|gb|ERP56355.1| hypothetical protein
           POPTR_0010s16150g [Populus trichocarpa]
          Length = 339

 Score = 56.2 bits (134), Expect = 9e-06
 Identities = 35/107 (32%), Positives = 47/107 (43%), Gaps = 2/107 (1%)
 Frame = -2

Query: 315 MKKWSGGTXXXXXXXXXXLRYSFMDTPXXXXXXXXXXXXXSNIVSHVGGNHIARGPRPT- 139
           MKKWSGG             YS M T                  SH+  NH A+ P+   
Sbjct: 1   MKKWSGGVVIIALAIILVFSYSLMGTRTQKKQSYDFFRNHPAGDSHLKDNHPAKSPQLEL 60

Query: 138 -DAFNHLNKAQLVTIEGINDLYSFTNISEHDSRVKLVWDQMHYLISR 1
             A     K   + +EG++DLY+  NIS+ +S   +VW QM  L+SR
Sbjct: 61  KKATKSSKKPHYINVEGLSDLYAQNNISKDESNALVVWFQMRLLLSR 107


Top