BLASTX nr result
ID: Cinnamomum24_contig00026449
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Cinnamomum24_contig00026449
(677 letters)
Database: ./nr
77,306,371 sequences; 28,104,191,420 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|ERM98365.1| hypothetical protein AMTR_s01499p00009870 [Ambore... 289 e-106
gb|EPS74480.1| hypothetical protein M569_00269, partial [Genlise... 285 e-104
gb|AKU70966.1| RNA polymerase beta subunit (chloroplast) [Cinnam... 322 2e-85
ref|YP_009093942.1| RNA polymerase beta subunit (chloroplast) [N... 320 7e-85
ref|YP_009172052.1| RNA polymerase beta subunit (chloroplast) [M... 319 9e-85
ref|YP_004563859.1| RNA polymerase beta subunit [Nelumbo lutea] ... 318 1e-84
ref|YP_009179722.1| RNA polymerase beta subunit (chloroplast) [I... 318 2e-84
ref|YP_009175667.1| RNA polymerase beta subunit (chloroplast) [E... 318 2e-84
ref|YP_009169348.1| RNA polymerase beta subunit (chloroplast) [C... 318 2e-84
ref|YP_009161913.1| RNA polymerase beta subunit (chloroplast) [C... 318 2e-84
gb|AKD00081.1| RNA polymerase beta subunit (plastid) [Brassica n... 318 2e-84
gb|AKM98073.1| RNA polymerase beta subunit (chloroplast) [Anemon... 318 2e-84
gb|AKM97910.1| rpoB (chloroplast) [Brassica oleracea var. capitata] 318 2e-84
ref|YP_009121080.1| RNA polymerase beta subunit (plastid) [Carda... 318 2e-84
gb|AIZ57525.1| RNA polymerase beta subunit (chloroplast) [Clemat... 318 2e-84
emb|CDX77004.1| BnaC04g37990D [Brassica napus] 318 2e-84
gb|AGN73972.1| RNA polymerase beta subunit (chloroplast) [Aconit... 318 2e-84
ref|YP_005089944.1| rpoB gene product (chloroplast) [Brassica na... 318 2e-84
ref|YP_009000324.1| rpoB protein (chloroplast) [Arabis alpina] g... 318 2e-84
ref|YP_007889934.1| RNA polymerase beta subunit (chloroplast) [P... 318 2e-84
>gb|ERM98365.1| hypothetical protein AMTR_s01499p00009870 [Amborella trichopoda]
Length = 351
Score = 289 bits (740), Expect(2) = e-106
Identities = 143/159 (89%), Positives = 149/159 (93%)
Frame = -3
Query: 675 QTANPWVFEPEYPGKSRILDGRTGDPFEQPVIIGKSYILKLIHQVDDKIHGRSSGHYALV 496
Q ANPWVFEP+YPGKSRI DGRTGDPFEQPVIIG+SY+LKLIHQVD+KIHGRSSGHYALV
Sbjct: 72 QKANPWVFEPKYPGKSRIFDGRTGDPFEQPVIIGQSYMLKLIHQVDEKIHGRSSGHYALV 131
Query: 495 TQQPLRGRAKQGGQRVGEMEVWALEGFGVAHILQEMLTYKSDHIRARQEVLGTTIIGGTI 316
TQQPLRGRAKQG QRVGEMEVWALEGFGVAHILQEMLTYKSD IRA +E LGT I+GGTI
Sbjct: 132 TQQPLRGRAKQGAQRVGEMEVWALEGFGVAHILQEMLTYKSDPIRALKEQLGTMIVGGTI 191
Query: 315 LKPEDAPESFRLLVRELRSLALELNHFLVSEKNFQINRK 199
KPE APESFRLLVRELRSLALEL HFLVSEKNFQINRK
Sbjct: 192 PKPEGAPESFRLLVRELRSLALELKHFLVSEKNFQINRK 230
Score = 124 bits (311), Expect(2) = e-106
Identities = 57/63 (90%), Positives = 60/63 (95%)
Frame = -2
Query: 190 IEMNQNFSSMIDRYKHQQLRVGLVSPQQISAWATKILPNGEMVGEVTKPYTFHYKSNKPE 11
+ MNQNFSSMIDRYKHQQLR+GLVSPQQ +AWA KILPNGEMVGEVTKPYTFHYKSNKPE
Sbjct: 231 VGMNQNFSSMIDRYKHQQLRIGLVSPQQRTAWANKILPNGEMVGEVTKPYTFHYKSNKPE 290
Query: 10 KDG 2
KDG
Sbjct: 291 KDG 293
>gb|EPS74480.1| hypothetical protein M569_00269, partial [Genlisea aurea]
Length = 1213
Score = 285 bits (729), Expect(2) = e-104
Identities = 140/148 (94%), Positives = 142/148 (95%)
Frame = -3
Query: 675 QTANPWVFEPEYPGKSRILDGRTGDPFEQPVIIGKSYILKLIHQVDDKIHGRSSGHYALV 496
QTANPWVFEPEYPGKSRI DGRTG+PFEQPVIIGK YILKLIHQVDDKIHGRSSGHYALV
Sbjct: 909 QTANPWVFEPEYPGKSRIFDGRTGNPFEQPVIIGKPYILKLIHQVDDKIHGRSSGHYALV 968
Query: 495 TQQPLRGRAKQGGQRVGEMEVWALEGFGVAHILQEMLTYKSDHIRARQEVLGTTIIGGTI 316
TQQPLRGRAKQGGQRVGEMEVWALEGFGVAHILQEMLTYKSDHIRARQEVLGTTIIGGTI
Sbjct: 969 TQQPLRGRAKQGGQRVGEMEVWALEGFGVAHILQEMLTYKSDHIRARQEVLGTTIIGGTI 1028
Query: 315 LKPEDAPESFRLLVRELRSLALELNHFL 232
P+D PESFRLLVRELRSLALELNH L
Sbjct: 1029 PNPQDTPESFRLLVRELRSLALELNHCL 1056
Score = 121 bits (304), Expect(2) = e-104
Identities = 56/67 (83%), Positives = 62/67 (92%)
Frame = -2
Query: 202 EGSLIEMNQNFSSMIDRYKHQQLRVGLVSPQQISAWATKILPNGEMVGEVTKPYTFHYKS 23
E SLI +N NFSSMIDRYKHQQLR+GLVSP+QI AWATKILPNG++VGEVTKPYTFHYK+
Sbjct: 1057 EESLIGINHNFSSMIDRYKHQQLRIGLVSPEQIRAWATKILPNGKIVGEVTKPYTFHYKT 1116
Query: 22 NKPEKDG 2
NKPE DG
Sbjct: 1117 NKPEMDG 1123
>gb|AKU70966.1| RNA polymerase beta subunit (chloroplast) [Cinnamomum micranthum f.
kanehirae]
Length = 1077
Score = 322 bits (824), Expect = 2e-85
Identities = 159/160 (99%), Positives = 159/160 (99%)
Frame = -3
Query: 675 QTANPWVFEPEYPGKSRILDGRTGDPFEQPVIIGKSYILKLIHQVDDKIHGRSSGHYALV 496
QTANPWVFEPEYPGKSRILDGRTGDPFEQPVIIGKSYILKLIHQVDDKIHGRSSGHYALV
Sbjct: 917 QTANPWVFEPEYPGKSRILDGRTGDPFEQPVIIGKSYILKLIHQVDDKIHGRSSGHYALV 976
Query: 495 TQQPLRGRAKQGGQRVGEMEVWALEGFGVAHILQEMLTYKSDHIRARQEVLGTTIIGGTI 316
TQQPLRGRAKQGGQRVGEMEVWALEGFGVAHI QEMLTYKSDHIRARQEVLGTTIIGGTI
Sbjct: 977 TQQPLRGRAKQGGQRVGEMEVWALEGFGVAHISQEMLTYKSDHIRARQEVLGTTIIGGTI 1036
Query: 315 LKPEDAPESFRLLVRELRSLALELNHFLVSEKNFQINRKE 196
LKPEDAPESFRLLVRELRSLALELNHFLVSEKNFQINRKE
Sbjct: 1037 LKPEDAPESFRLLVRELRSLALELNHFLVSEKNFQINRKE 1076
>ref|YP_009093942.1| RNA polymerase beta subunit (chloroplast) [Nelumbo nucifera]
gi|224474214|gb|ACN49400.1| RNA polymerase beta subunit
(chloroplast) [Nelumbo nucifera]
gi|290489618|gb|ADD31193.1| RNA polymerase beta subunit
protein (chloroplast) [Nelumbo nucifera]
gi|383286789|gb|AFH01439.1| RNA polymerase beta subunit
(chloroplast) [Nelumbo nucifera]
gi|519666904|gb|AGO98516.1| RNA polymerase beta subunit
(chloroplast) [Nelumbo nucifera]
gi|725824035|gb|AIY33814.1| RNA polymerase beta subunit
(chloroplast) [Nelumbo nucifera]
Length = 1070
Score = 320 bits (819), Expect = 7e-85
Identities = 157/160 (98%), Positives = 158/160 (98%)
Frame = -3
Query: 675 QTANPWVFEPEYPGKSRILDGRTGDPFEQPVIIGKSYILKLIHQVDDKIHGRSSGHYALV 496
QTANPWVFEPEYPGKSRI DGRTGDPFEQPVIIGKSYILKLIHQVDDKIHGRSSGHYALV
Sbjct: 910 QTANPWVFEPEYPGKSRIFDGRTGDPFEQPVIIGKSYILKLIHQVDDKIHGRSSGHYALV 969
Query: 495 TQQPLRGRAKQGGQRVGEMEVWALEGFGVAHILQEMLTYKSDHIRARQEVLGTTIIGGTI 316
TQQPLRGRAKQGGQRVGEMEVWALEGFGVAHILQEMLTYKSDHIRARQEVLGTTIIGGTI
Sbjct: 970 TQQPLRGRAKQGGQRVGEMEVWALEGFGVAHILQEMLTYKSDHIRARQEVLGTTIIGGTI 1029
Query: 315 LKPEDAPESFRLLVRELRSLALELNHFLVSEKNFQINRKE 196
+ PEDAPESFRLLVRELRSLALELNHFLVSEKNFQINRKE
Sbjct: 1030 INPEDAPESFRLLVRELRSLALELNHFLVSEKNFQINRKE 1069
>ref|YP_009172052.1| RNA polymerase beta subunit (chloroplast) [Machilus balansae]
gi|929982396|gb|ALF35757.1| RNA polymerase beta subunit
(chloroplast) [Machilus balansae]
Length = 1060
Score = 319 bits (818), Expect = 9e-85
Identities = 158/160 (98%), Positives = 158/160 (98%)
Frame = -3
Query: 675 QTANPWVFEPEYPGKSRILDGRTGDPFEQPVIIGKSYILKLIHQVDDKIHGRSSGHYALV 496
QTANPWVFEPEYPGKSRILDGRTGDPFEQPVIIGKSYILKLIHQVDDKIH RSSGHYALV
Sbjct: 900 QTANPWVFEPEYPGKSRILDGRTGDPFEQPVIIGKSYILKLIHQVDDKIHARSSGHYALV 959
Query: 495 TQQPLRGRAKQGGQRVGEMEVWALEGFGVAHILQEMLTYKSDHIRARQEVLGTTIIGGTI 316
TQQPLRGRAKQGGQRVGEMEVWALEGFGVAHI QEMLTYKSDHIRARQEVLGTTIIGGTI
Sbjct: 960 TQQPLRGRAKQGGQRVGEMEVWALEGFGVAHISQEMLTYKSDHIRARQEVLGTTIIGGTI 1019
Query: 315 LKPEDAPESFRLLVRELRSLALELNHFLVSEKNFQINRKE 196
LKPEDAPESFRLLVRELRSLALELNHFLVSEKNFQINRKE
Sbjct: 1020 LKPEDAPESFRLLVRELRSLALELNHFLVSEKNFQINRKE 1059
>ref|YP_004563859.1| RNA polymerase beta subunit [Nelumbo lutea]
gi|224474126|gb|ACN49315.1| RNA polymerase beta subunit
(chloroplast) [Nelumbo lutea] gi|383286884|gb|AFH01533.1|
RNA polymerase beta subunit (chloroplast) [Nelumbo lutea]
Length = 1070
Score = 318 bits (816), Expect = 1e-84
Identities = 157/160 (98%), Positives = 157/160 (98%)
Frame = -3
Query: 675 QTANPWVFEPEYPGKSRILDGRTGDPFEQPVIIGKSYILKLIHQVDDKIHGRSSGHYALV 496
QTANPWVFEPEYPGKSRI DGRTGDPFEQPVIIGKSYILKLIHQVDDKIHGRSSGHYALV
Sbjct: 910 QTANPWVFEPEYPGKSRIFDGRTGDPFEQPVIIGKSYILKLIHQVDDKIHGRSSGHYALV 969
Query: 495 TQQPLRGRAKQGGQRVGEMEVWALEGFGVAHILQEMLTYKSDHIRARQEVLGTTIIGGTI 316
TQQPLRGRAKQGGQRVGEMEVWALEGFGVAHILQEMLTYKSDHIRARQEVLGTTIIGGTI
Sbjct: 970 TQQPLRGRAKQGGQRVGEMEVWALEGFGVAHILQEMLTYKSDHIRARQEVLGTTIIGGTI 1029
Query: 315 LKPEDAPESFRLLVRELRSLALELNHFLVSEKNFQINRKE 196
PEDAPESFRLLVRELRSLALELNHFLVSEKNFQINRKE
Sbjct: 1030 TNPEDAPESFRLLVRELRSLALELNHFLVSEKNFQINRKE 1069
>ref|YP_009179722.1| RNA polymerase beta subunit (chloroplast) [Isatis tinctoria]
gi|943496322|gb|ALL45385.1| RNA polymerase beta subunit
(chloroplast) [Isatis tinctoria]
Length = 1072
Score = 318 bits (815), Expect = 2e-84
Identities = 157/161 (97%), Positives = 158/161 (98%)
Frame = -3
Query: 675 QTANPWVFEPEYPGKSRILDGRTGDPFEQPVIIGKSYILKLIHQVDDKIHGRSSGHYALV 496
QTANPWVFEPEYPGKSRI DGRTGDPFEQPVIIGK YILKLIHQVDDKIHGRSSGHYALV
Sbjct: 912 QTANPWVFEPEYPGKSRIFDGRTGDPFEQPVIIGKPYILKLIHQVDDKIHGRSSGHYALV 971
Query: 495 TQQPLRGRAKQGGQRVGEMEVWALEGFGVAHILQEMLTYKSDHIRARQEVLGTTIIGGTI 316
TQQPLRGR+KQGGQRVGEMEVWALEGFGVAHILQEMLTYKSDHIRARQEVLGTTIIGGTI
Sbjct: 972 TQQPLRGRSKQGGQRVGEMEVWALEGFGVAHILQEMLTYKSDHIRARQEVLGTTIIGGTI 1031
Query: 315 LKPEDAPESFRLLVRELRSLALELNHFLVSEKNFQINRKEV 193
KPEDAPESFRLLVRELRSLALELNHFLVSEKNFQINRKEV
Sbjct: 1032 PKPEDAPESFRLLVRELRSLALELNHFLVSEKNFQINRKEV 1072
>ref|YP_009175667.1| RNA polymerase beta subunit (chloroplast) [Eutrema salsugineum]
gi|936230362|gb|ALH16836.1| RNA polymerase beta subunit
(chloroplast) [Eutrema salsugineum]
Length = 1072
Score = 318 bits (815), Expect = 2e-84
Identities = 157/161 (97%), Positives = 158/161 (98%)
Frame = -3
Query: 675 QTANPWVFEPEYPGKSRILDGRTGDPFEQPVIIGKSYILKLIHQVDDKIHGRSSGHYALV 496
QTANPWVFEPEYPGKSRI DGRTGDPFEQPVIIGK YILKLIHQVDDKIHGRSSGHYALV
Sbjct: 912 QTANPWVFEPEYPGKSRIFDGRTGDPFEQPVIIGKPYILKLIHQVDDKIHGRSSGHYALV 971
Query: 495 TQQPLRGRAKQGGQRVGEMEVWALEGFGVAHILQEMLTYKSDHIRARQEVLGTTIIGGTI 316
TQQPLRGR+KQGGQRVGEMEVWALEGFGVAHILQEMLTYKSDHIRARQEVLGTTIIGGTI
Sbjct: 972 TQQPLRGRSKQGGQRVGEMEVWALEGFGVAHILQEMLTYKSDHIRARQEVLGTTIIGGTI 1031
Query: 315 LKPEDAPESFRLLVRELRSLALELNHFLVSEKNFQINRKEV 193
KPEDAPESFRLLVRELRSLALELNHFLVSEKNFQINRKEV
Sbjct: 1032 PKPEDAPESFRLLVRELRSLALELNHFLVSEKNFQINRKEV 1072
>ref|YP_009169348.1| RNA polymerase beta subunit (chloroplast) [Clematis terniflora]
gi|687814847|gb|AIQ81089.1| RNA polymerase beta subunit
(chloroplast) [Clematis terniflora]
Length = 1070
Score = 318 bits (815), Expect = 2e-84
Identities = 157/160 (98%), Positives = 157/160 (98%)
Frame = -3
Query: 675 QTANPWVFEPEYPGKSRILDGRTGDPFEQPVIIGKSYILKLIHQVDDKIHGRSSGHYALV 496
QTANPWVFEPEYPGKSRI DGRTGDPFEQPVIIGKSYILKLIHQVDDKIHGRSSGHYALV
Sbjct: 910 QTANPWVFEPEYPGKSRIFDGRTGDPFEQPVIIGKSYILKLIHQVDDKIHGRSSGHYALV 969
Query: 495 TQQPLRGRAKQGGQRVGEMEVWALEGFGVAHILQEMLTYKSDHIRARQEVLGTTIIGGTI 316
TQQPLRGRAKQGGQRVGEMEVWALEGFGVAHILQEMLTYKSDHIRARQEVLGTTIIGGTI
Sbjct: 970 TQQPLRGRAKQGGQRVGEMEVWALEGFGVAHILQEMLTYKSDHIRARQEVLGTTIIGGTI 1029
Query: 315 LKPEDAPESFRLLVRELRSLALELNHFLVSEKNFQINRKE 196
PEDAPESFRLLVRELRSLALELNHFLVSEKNFQINRKE
Sbjct: 1030 SNPEDAPESFRLLVRELRSLALELNHFLVSEKNFQINRKE 1069
>ref|YP_009161913.1| RNA polymerase beta subunit (chloroplast) [Capsella rubella]
gi|906347047|gb|AKS28763.1| RNA polymerase beta subunit
(chloroplast) [Capsella rubella]
Length = 1072
Score = 318 bits (815), Expect = 2e-84
Identities = 157/161 (97%), Positives = 158/161 (98%)
Frame = -3
Query: 675 QTANPWVFEPEYPGKSRILDGRTGDPFEQPVIIGKSYILKLIHQVDDKIHGRSSGHYALV 496
QTANPWVFEPEYPGKSRI DGRTGDPFEQPVIIGK YILKLIHQVDDKIHGRSSGHYALV
Sbjct: 912 QTANPWVFEPEYPGKSRIFDGRTGDPFEQPVIIGKPYILKLIHQVDDKIHGRSSGHYALV 971
Query: 495 TQQPLRGRAKQGGQRVGEMEVWALEGFGVAHILQEMLTYKSDHIRARQEVLGTTIIGGTI 316
TQQPLRGR+KQGGQRVGEMEVWALEGFGVAHILQEMLTYKSDHIRARQEVLGTTIIGGTI
Sbjct: 972 TQQPLRGRSKQGGQRVGEMEVWALEGFGVAHILQEMLTYKSDHIRARQEVLGTTIIGGTI 1031
Query: 315 LKPEDAPESFRLLVRELRSLALELNHFLVSEKNFQINRKEV 193
KPEDAPESFRLLVRELRSLALELNHFLVSEKNFQINRKEV
Sbjct: 1032 PKPEDAPESFRLLVRELRSLALELNHFLVSEKNFQINRKEV 1072
>gb|AKD00081.1| RNA polymerase beta subunit (plastid) [Brassica napus]
Length = 1072
Score = 318 bits (815), Expect = 2e-84
Identities = 157/161 (97%), Positives = 158/161 (98%)
Frame = -3
Query: 675 QTANPWVFEPEYPGKSRILDGRTGDPFEQPVIIGKSYILKLIHQVDDKIHGRSSGHYALV 496
QTANPWVFEPEYPGKSRI DGRTGDPFEQPVIIGK YILKLIHQVDDKIHGRSSGHYALV
Sbjct: 912 QTANPWVFEPEYPGKSRIFDGRTGDPFEQPVIIGKPYILKLIHQVDDKIHGRSSGHYALV 971
Query: 495 TQQPLRGRAKQGGQRVGEMEVWALEGFGVAHILQEMLTYKSDHIRARQEVLGTTIIGGTI 316
TQQPLRGR+KQGGQRVGEMEVWALEGFGVAHILQEMLTYKSDHIRARQEVLGTTIIGGTI
Sbjct: 972 TQQPLRGRSKQGGQRVGEMEVWALEGFGVAHILQEMLTYKSDHIRARQEVLGTTIIGGTI 1031
Query: 315 LKPEDAPESFRLLVRELRSLALELNHFLVSEKNFQINRKEV 193
KPEDAPESFRLLVRELRSLALELNHFLVSEKNFQINRKEV
Sbjct: 1032 PKPEDAPESFRLLVRELRSLALELNHFLVSEKNFQINRKEV 1072
>gb|AKM98073.1| RNA polymerase beta subunit (chloroplast) [Anemone patens]
gi|844170200|gb|AKM98161.1| RNA polymerase beta subunit
(chloroplast) [Anemone patens]
gi|844170580|gb|AKM98425.1| RNA polymerase beta subunit
(chloroplast) [Pulsatilla vernalis]
gi|844170721|gb|AKM98513.1| RNA polymerase beta subunit
(chloroplast) [Pulsatilla vernalis]
Length = 1082
Score = 318 bits (815), Expect = 2e-84
Identities = 157/160 (98%), Positives = 157/160 (98%)
Frame = -3
Query: 675 QTANPWVFEPEYPGKSRILDGRTGDPFEQPVIIGKSYILKLIHQVDDKIHGRSSGHYALV 496
QTANPWVFEPEYPGKSRI DGRTGDPFEQPVIIGKSYILKLIHQVDDKIHGRSSGHYALV
Sbjct: 922 QTANPWVFEPEYPGKSRIFDGRTGDPFEQPVIIGKSYILKLIHQVDDKIHGRSSGHYALV 981
Query: 495 TQQPLRGRAKQGGQRVGEMEVWALEGFGVAHILQEMLTYKSDHIRARQEVLGTTIIGGTI 316
TQQPLRGRAKQGGQRVGEMEVWALEGFGVAHILQEMLTYKSDHIRARQEVLGTTIIGGTI
Sbjct: 982 TQQPLRGRAKQGGQRVGEMEVWALEGFGVAHILQEMLTYKSDHIRARQEVLGTTIIGGTI 1041
Query: 315 LKPEDAPESFRLLVRELRSLALELNHFLVSEKNFQINRKE 196
PEDAPESFRLLVRELRSLALELNHFLVSEKNFQINRKE
Sbjct: 1042 SNPEDAPESFRLLVRELRSLALELNHFLVSEKNFQINRKE 1081
>gb|AKM97910.1| rpoB (chloroplast) [Brassica oleracea var. capitata]
Length = 1072
Score = 318 bits (815), Expect = 2e-84
Identities = 157/161 (97%), Positives = 158/161 (98%)
Frame = -3
Query: 675 QTANPWVFEPEYPGKSRILDGRTGDPFEQPVIIGKSYILKLIHQVDDKIHGRSSGHYALV 496
QTANPWVFEPEYPGKSRI DGRTGDPFEQPVIIGK YILKLIHQVDDKIHGRSSGHYALV
Sbjct: 912 QTANPWVFEPEYPGKSRIFDGRTGDPFEQPVIIGKPYILKLIHQVDDKIHGRSSGHYALV 971
Query: 495 TQQPLRGRAKQGGQRVGEMEVWALEGFGVAHILQEMLTYKSDHIRARQEVLGTTIIGGTI 316
TQQPLRGR+KQGGQRVGEMEVWALEGFGVAHILQEMLTYKSDHIRARQEVLGTTIIGGTI
Sbjct: 972 TQQPLRGRSKQGGQRVGEMEVWALEGFGVAHILQEMLTYKSDHIRARQEVLGTTIIGGTI 1031
Query: 315 LKPEDAPESFRLLVRELRSLALELNHFLVSEKNFQINRKEV 193
KPEDAPESFRLLVRELRSLALELNHFLVSEKNFQINRKEV
Sbjct: 1032 PKPEDAPESFRLLVRELRSLALELNHFLVSEKNFQINRKEV 1072
>ref|YP_009121080.1| RNA polymerase beta subunit (plastid) [Cardamine resedifolia]
gi|597441222|gb|AHN07247.1| RNA polymerase beta subunit
[Cardamine resedifolia]
Length = 1072
Score = 318 bits (815), Expect = 2e-84
Identities = 157/161 (97%), Positives = 158/161 (98%)
Frame = -3
Query: 675 QTANPWVFEPEYPGKSRILDGRTGDPFEQPVIIGKSYILKLIHQVDDKIHGRSSGHYALV 496
QTANPWVFEPEYPGKSRI DGRTGDPFEQPVIIGK YILKLIHQVDDKIHGRSSGHYALV
Sbjct: 912 QTANPWVFEPEYPGKSRIFDGRTGDPFEQPVIIGKPYILKLIHQVDDKIHGRSSGHYALV 971
Query: 495 TQQPLRGRAKQGGQRVGEMEVWALEGFGVAHILQEMLTYKSDHIRARQEVLGTTIIGGTI 316
TQQPLRGR+KQGGQRVGEMEVWALEGFGVAHILQEMLTYKSDHIRARQEVLGTTIIGGTI
Sbjct: 972 TQQPLRGRSKQGGQRVGEMEVWALEGFGVAHILQEMLTYKSDHIRARQEVLGTTIIGGTI 1031
Query: 315 LKPEDAPESFRLLVRELRSLALELNHFLVSEKNFQINRKEV 193
KPEDAPESFRLLVRELRSLALELNHFLVSEKNFQINRKEV
Sbjct: 1032 PKPEDAPESFRLLVRELRSLALELNHFLVSEKNFQINRKEV 1072
>gb|AIZ57525.1| RNA polymerase beta subunit (chloroplast) [Clematis fusca var.
coreana]
Length = 1082
Score = 318 bits (815), Expect = 2e-84
Identities = 157/160 (98%), Positives = 157/160 (98%)
Frame = -3
Query: 675 QTANPWVFEPEYPGKSRILDGRTGDPFEQPVIIGKSYILKLIHQVDDKIHGRSSGHYALV 496
QTANPWVFEPEYPGKSRI DGRTGDPFEQPVIIGKSYILKLIHQVDDKIHGRSSGHYALV
Sbjct: 922 QTANPWVFEPEYPGKSRIFDGRTGDPFEQPVIIGKSYILKLIHQVDDKIHGRSSGHYALV 981
Query: 495 TQQPLRGRAKQGGQRVGEMEVWALEGFGVAHILQEMLTYKSDHIRARQEVLGTTIIGGTI 316
TQQPLRGRAKQGGQRVGEMEVWALEGFGVAHILQEMLTYKSDHIRARQEVLGTTIIGGTI
Sbjct: 982 TQQPLRGRAKQGGQRVGEMEVWALEGFGVAHILQEMLTYKSDHIRARQEVLGTTIIGGTI 1041
Query: 315 LKPEDAPESFRLLVRELRSLALELNHFLVSEKNFQINRKE 196
PEDAPESFRLLVRELRSLALELNHFLVSEKNFQINRKE
Sbjct: 1042 SNPEDAPESFRLLVRELRSLALELNHFLVSEKNFQINRKE 1081
>emb|CDX77004.1| BnaC04g37990D [Brassica napus]
Length = 527
Score = 318 bits (815), Expect = 2e-84
Identities = 157/161 (97%), Positives = 158/161 (98%)
Frame = -3
Query: 675 QTANPWVFEPEYPGKSRILDGRTGDPFEQPVIIGKSYILKLIHQVDDKIHGRSSGHYALV 496
QTANPWVFEPEYPGKSRI DGRTGDPFEQPVIIGK YILKLIHQVDDKIHGRSSGHYALV
Sbjct: 367 QTANPWVFEPEYPGKSRIFDGRTGDPFEQPVIIGKPYILKLIHQVDDKIHGRSSGHYALV 426
Query: 495 TQQPLRGRAKQGGQRVGEMEVWALEGFGVAHILQEMLTYKSDHIRARQEVLGTTIIGGTI 316
TQQPLRGR+KQGGQRVGEMEVWALEGFGVAHILQEMLTYKSDHIRARQEVLGTTIIGGTI
Sbjct: 427 TQQPLRGRSKQGGQRVGEMEVWALEGFGVAHILQEMLTYKSDHIRARQEVLGTTIIGGTI 486
Query: 315 LKPEDAPESFRLLVRELRSLALELNHFLVSEKNFQINRKEV 193
KPEDAPESFRLLVRELRSLALELNHFLVSEKNFQINRKEV
Sbjct: 487 PKPEDAPESFRLLVRELRSLALELNHFLVSEKNFQINRKEV 527
>gb|AGN73972.1| RNA polymerase beta subunit (chloroplast) [Aconitum barbatum var.
puberulum]
Length = 1089
Score = 318 bits (815), Expect = 2e-84
Identities = 157/160 (98%), Positives = 157/160 (98%)
Frame = -3
Query: 675 QTANPWVFEPEYPGKSRILDGRTGDPFEQPVIIGKSYILKLIHQVDDKIHGRSSGHYALV 496
QTANPWVFEPEYPGKSRI DGRTGDPFEQPVIIGKSYILKLIHQVDDKIHGRSSGHYALV
Sbjct: 929 QTANPWVFEPEYPGKSRIFDGRTGDPFEQPVIIGKSYILKLIHQVDDKIHGRSSGHYALV 988
Query: 495 TQQPLRGRAKQGGQRVGEMEVWALEGFGVAHILQEMLTYKSDHIRARQEVLGTTIIGGTI 316
TQQPLRGRAKQGGQRVGEMEVWALEGFGVAHILQEMLTYKSDHIRARQEVLGTTIIGGTI
Sbjct: 989 TQQPLRGRAKQGGQRVGEMEVWALEGFGVAHILQEMLTYKSDHIRARQEVLGTTIIGGTI 1048
Query: 315 LKPEDAPESFRLLVRELRSLALELNHFLVSEKNFQINRKE 196
PEDAPESFRLLVRELRSLALELNHFLVSEKNFQINRKE
Sbjct: 1049 SNPEDAPESFRLLVRELRSLALELNHFLVSEKNFQINRKE 1088
>ref|YP_005089944.1| rpoB gene product (chloroplast) [Brassica napus]
gi|262400793|gb|ACY66282.1| RNA polymerase beta subunit
[Brassica napus]
Length = 1072
Score = 318 bits (815), Expect = 2e-84
Identities = 157/161 (97%), Positives = 158/161 (98%)
Frame = -3
Query: 675 QTANPWVFEPEYPGKSRILDGRTGDPFEQPVIIGKSYILKLIHQVDDKIHGRSSGHYALV 496
QTANPWVFEPEYPGKSRI DGRTGDPFEQPVIIGK YILKLIHQVDDKIHGRSSGHYALV
Sbjct: 912 QTANPWVFEPEYPGKSRIFDGRTGDPFEQPVIIGKPYILKLIHQVDDKIHGRSSGHYALV 971
Query: 495 TQQPLRGRAKQGGQRVGEMEVWALEGFGVAHILQEMLTYKSDHIRARQEVLGTTIIGGTI 316
TQQPLRGR+KQGGQRVGEMEVWALEGFGVAHILQEMLTYKSDHIRARQEVLGTTIIGGTI
Sbjct: 972 TQQPLRGRSKQGGQRVGEMEVWALEGFGVAHILQEMLTYKSDHIRARQEVLGTTIIGGTI 1031
Query: 315 LKPEDAPESFRLLVRELRSLALELNHFLVSEKNFQINRKEV 193
KPEDAPESFRLLVRELRSLALELNHFLVSEKNFQINRKEV
Sbjct: 1032 PKPEDAPESFRLLVRELRSLALELNHFLVSEKNFQINRKEV 1072
>ref|YP_009000324.1| rpoB protein (chloroplast) [Arabis alpina]
gi|571025796|emb|CCW28171.1| rpoB protein (chloroplast)
[Arabis alpina]
Length = 1072
Score = 318 bits (815), Expect = 2e-84
Identities = 157/161 (97%), Positives = 158/161 (98%)
Frame = -3
Query: 675 QTANPWVFEPEYPGKSRILDGRTGDPFEQPVIIGKSYILKLIHQVDDKIHGRSSGHYALV 496
QTANPWVFEPEYPGKSRI DGRTGDPFEQPVIIGK YILKLIHQVDDKIHGRSSGHYALV
Sbjct: 912 QTANPWVFEPEYPGKSRIFDGRTGDPFEQPVIIGKPYILKLIHQVDDKIHGRSSGHYALV 971
Query: 495 TQQPLRGRAKQGGQRVGEMEVWALEGFGVAHILQEMLTYKSDHIRARQEVLGTTIIGGTI 316
TQQPLRGR+KQGGQRVGEMEVWALEGFGVAHILQEMLTYKSDHIRARQEVLGTTIIGGTI
Sbjct: 972 TQQPLRGRSKQGGQRVGEMEVWALEGFGVAHILQEMLTYKSDHIRARQEVLGTTIIGGTI 1031
Query: 315 LKPEDAPESFRLLVRELRSLALELNHFLVSEKNFQINRKEV 193
KPEDAPESFRLLVRELRSLALELNHFLVSEKNFQINRKEV
Sbjct: 1032 PKPEDAPESFRLLVRELRSLALELNHFLVSEKNFQINRKEV 1072
>ref|YP_007889934.1| RNA polymerase beta subunit (chloroplast) [Pachycladon cheesemanii]
gi|392934145|gb|AFM92271.1| RNA polymerase beta subunit
(chloroplast) [Pachycladon cheesemanii]
Length = 1072
Score = 318 bits (815), Expect = 2e-84
Identities = 157/161 (97%), Positives = 158/161 (98%)
Frame = -3
Query: 675 QTANPWVFEPEYPGKSRILDGRTGDPFEQPVIIGKSYILKLIHQVDDKIHGRSSGHYALV 496
QTANPWVFEPEYPGKSRI DGRTGDPFEQPVIIGK YILKLIHQVDDKIHGRSSGHYALV
Sbjct: 912 QTANPWVFEPEYPGKSRIFDGRTGDPFEQPVIIGKPYILKLIHQVDDKIHGRSSGHYALV 971
Query: 495 TQQPLRGRAKQGGQRVGEMEVWALEGFGVAHILQEMLTYKSDHIRARQEVLGTTIIGGTI 316
TQQPLRGR+KQGGQRVGEMEVWALEGFGVAHILQEMLTYKSDHIRARQEVLGTTIIGGTI
Sbjct: 972 TQQPLRGRSKQGGQRVGEMEVWALEGFGVAHILQEMLTYKSDHIRARQEVLGTTIIGGTI 1031
Query: 315 LKPEDAPESFRLLVRELRSLALELNHFLVSEKNFQINRKEV 193
KPEDAPESFRLLVRELRSLALELNHFLVSEKNFQINRKEV
Sbjct: 1032 PKPEDAPESFRLLVRELRSLALELNHFLVSEKNFQINRKEV 1072