BLASTX nr result

ID: Cinnamomum24_contig00026116 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cinnamomum24_contig00026116
         (417 letters)

Database: ./nr 
           77,306,371 sequences; 28,104,191,420 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_010266797.1| PREDICTED: putative uncharacterized protein ...    62   2e-07
emb|CBI33150.3| unnamed protein product [Vitis vinifera]               60   6e-07
ref|XP_003632479.1| PREDICTED: putative uncharacterized protein ...    60   6e-07
ref|XP_003601917.1| helicase, IBR and zinc finger protein [Medic...    60   6e-07
ref|XP_008235185.1| PREDICTED: putative uncharacterized protein ...    59   2e-06
gb|KRH31334.1| hypothetical protein GLYMA_11G242300 [Glycine max]      58   2e-06
ref|XP_003537562.1| PREDICTED: putative uncharacterized protein ...    58   2e-06
ref|XP_010254674.1| PREDICTED: putative uncharacterized protein ...    56   9e-06

>ref|XP_010266797.1| PREDICTED: putative uncharacterized protein At4g01020,
           chloroplastic [Nelumbo nucifera]
          Length = 1748

 Score = 61.6 bits (148), Expect = 2e-07
 Identities = 42/114 (36%), Positives = 55/114 (48%), Gaps = 26/114 (22%)
 Frame = -1

Query: 264 ETEKTMRRGLLPAPT-SRRPPLR------PPKF-------------------TVELQSGR 163
           E   + RRG++PA   S RPP +      PPKF                    VEL+SGR
Sbjct: 13  EPTTSSRRGVVPANCPSVRPPYQGRERYFPPKFRQDRIISMVYSFQYGRSNFVVELRSGR 72

Query: 162 GPFQKSDVEALISACPFAPNSYTIDLTSPVAAKLFFYYLQPAIDAVVFFWSRRL 1
               KSDVE L++ C   P    +  T  VAA+L+F     A++A+ FFW RRL
Sbjct: 73  RAITKSDVEVLLAGCASTPERCEVFPTVLVAARLYFQQWSDALEALTFFWERRL 126


>emb|CBI33150.3| unnamed protein product [Vitis vinifera]
          Length = 1988

 Score = 60.1 bits (144), Expect = 6e-07
 Identities = 32/93 (34%), Positives = 47/93 (50%), Gaps = 2/93 (2%)
 Frame = -1

Query: 273 KGAETEKTMRRGLLPAPTSRRPPLRP--PKFTVELQSGRGPFQKSDVEALISACPFAPNS 100
           +G E     R+ L P      PP  P  P F +EL+ G G F+K DV+ L++ C   P  
Sbjct: 38  RGDEFPSNCRQNLRPEVA---PPFHPSPPNFIIELRPGLGGFKKIDVDELLATCKLMPEK 94

Query: 99  YTIDLTSPVAAKLFFYYLQPAIDAVVFFWSRRL 1
            T+  + P+AA LFF      ++ +V+ W  RL
Sbjct: 95  VTVLSSGPIAATLFFRQWVDTLETMVYLWELRL 127


>ref|XP_003632479.1| PREDICTED: putative uncharacterized protein At4g01020,
           chloroplastic [Vitis vinifera]
          Length = 1686

 Score = 60.1 bits (144), Expect = 6e-07
 Identities = 32/93 (34%), Positives = 47/93 (50%), Gaps = 2/93 (2%)
 Frame = -1

Query: 273 KGAETEKTMRRGLLPAPTSRRPPLRP--PKFTVELQSGRGPFQKSDVEALISACPFAPNS 100
           +G E     R+ L P      PP  P  P F +EL+ G G F+K DV+ L++ C   P  
Sbjct: 38  RGDEFPSNCRQNLRPEVA---PPFHPSPPNFIIELRPGLGGFKKIDVDELLATCKLMPEK 94

Query: 99  YTIDLTSPVAAKLFFYYLQPAIDAVVFFWSRRL 1
            T+  + P+AA LFF      ++ +V+ W  RL
Sbjct: 95  VTVLSSGPIAATLFFRQWVDTLETMVYLWELRL 127


>ref|XP_003601917.1| helicase, IBR and zinc finger protein [Medicago truncatula]
           gi|355490965|gb|AES72168.1| helicase, IBR and zinc
           finger protein [Medicago truncatula]
          Length = 1718

 Score = 60.1 bits (144), Expect = 6e-07
 Identities = 31/75 (41%), Positives = 40/75 (53%)
 Frame = -1

Query: 225 PTSRRPPLRPPKFTVELQSGRGPFQKSDVEALISACPFAPNSYTIDLTSPVAAKLFFYYL 46
           P  R PP RPP F ++L  GR    + DV++LI  C   P++Y       VAA L F   
Sbjct: 41  PPERNPPHRPPNFILKLHLGRRALNRDDVDSLIGKCKPNPDNYCFYPCDGVAASLNFLQW 100

Query: 45  QPAIDAVVFFWSRRL 1
             A DAVV+FW  R+
Sbjct: 101 TDARDAVVWFWESRI 115


>ref|XP_008235185.1| PREDICTED: putative uncharacterized protein At4g01020,
           chloroplastic [Prunus mume]
          Length = 1724

 Score = 58.5 bits (140), Expect = 2e-06
 Identities = 28/78 (35%), Positives = 43/78 (55%)
 Frame = -1

Query: 234 LPAPTSRRPPLRPPKFTVELQSGRGPFQKSDVEALISACPFAPNSYTIDLTSPVAAKLFF 55
           LP    RRPP RPP F V L S +   +K+D++A+I+ C F P +     ++ +   LF+
Sbjct: 33  LPDGCCRRPPPRPPSFIVVLLSDQRNHRKADIDAVIAKCKFKPENVEFSPSNVIVVSLFY 92

Query: 54  YYLQPAIDAVVFFWSRRL 1
                A++A+V  W  RL
Sbjct: 93  TQWAHALEAIVCLWESRL 110


>gb|KRH31334.1| hypothetical protein GLYMA_11G242300 [Glycine max]
          Length = 1699

 Score = 58.2 bits (139), Expect = 2e-06
 Identities = 34/71 (47%), Positives = 42/71 (59%)
 Frame = -1

Query: 213 RPPLRPPKFTVELQSGRGPFQKSDVEALISACPFAPNSYTIDLTSPVAAKLFFYYLQPAI 34
           RPP   P F VEL+ GR P  + DVEALI  C  + +S+T   T  VAA L +   + A 
Sbjct: 56  RPP--EPYFRVELRLGRCPLHRDDVEALIDECRSSHDSFTFYPTDDVAAVLNYRSWEQAR 113

Query: 33  DAVVFFWSRRL 1
           DAVV+FW  RL
Sbjct: 114 DAVVWFWEARL 124


>ref|XP_003537562.1| PREDICTED: putative uncharacterized protein At4g01020,
           chloroplastic-like [Glycine max]
           gi|947082544|gb|KRH31333.1| hypothetical protein
           GLYMA_11G242300 [Glycine max]
          Length = 1736

 Score = 58.2 bits (139), Expect = 2e-06
 Identities = 34/71 (47%), Positives = 42/71 (59%)
 Frame = -1

Query: 213 RPPLRPPKFTVELQSGRGPFQKSDVEALISACPFAPNSYTIDLTSPVAAKLFFYYLQPAI 34
           RPP   P F VEL+ GR P  + DVEALI  C  + +S+T   T  VAA L +   + A 
Sbjct: 56  RPP--EPYFRVELRLGRCPLHRDDVEALIDECRSSHDSFTFYPTDDVAAVLNYRSWEQAR 113

Query: 33  DAVVFFWSRRL 1
           DAVV+FW  RL
Sbjct: 114 DAVVWFWEARL 124


>ref|XP_010254674.1| PREDICTED: putative uncharacterized protein At4g01020,
           chloroplastic [Nelumbo nucifera]
          Length = 1728

 Score = 56.2 bits (134), Expect = 9e-06
 Identities = 29/64 (45%), Positives = 41/64 (64%), Gaps = 1/64 (1%)
 Frame = -1

Query: 189 FTVELQSGRGPF-QKSDVEALISACPFAPNSYTIDLTSPVAAKLFFYYLQPAIDAVVFFW 13
           F +EL+S R P   KS+V+AL++ C   P+   +  T  VAAKL+F     A++A+VFFW
Sbjct: 36  FIIELRSSRRPLLSKSNVDALLAHCTVTPDRSEVFPTDLVAAKLYFLQWSDALEAMVFFW 95

Query: 12  SRRL 1
            RRL
Sbjct: 96  ERRL 99


Top