BLASTX nr result
ID: Cinnamomum24_contig00026073
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Cinnamomum24_contig00026073 (778 letters) Database: ./nr 77,306,371 sequences; 28,104,191,420 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_010242769.1| PREDICTED: pentatricopeptide repeat-containi... 391 e-106 ref|XP_010242768.1| PREDICTED: pentatricopeptide repeat-containi... 391 e-106 ref|XP_002270184.2| PREDICTED: pentatricopeptide repeat-containi... 373 e-101 ref|XP_008339355.1| PREDICTED: pentatricopeptide repeat-containi... 372 e-100 ref|XP_009393978.1| PREDICTED: pentatricopeptide repeat-containi... 370 e-100 ref|XP_008797917.1| PREDICTED: pentatricopeptide repeat-containi... 369 e-99 ref|XP_011464850.1| PREDICTED: pentatricopeptide repeat-containi... 369 e-99 ref|XP_010911329.1| PREDICTED: pentatricopeptide repeat-containi... 368 2e-99 ref|XP_009618311.1| PREDICTED: pentatricopeptide repeat-containi... 368 2e-99 ref|XP_009618310.1| PREDICTED: pentatricopeptide repeat-containi... 368 2e-99 ref|XP_009618309.1| PREDICTED: pentatricopeptide repeat-containi... 368 2e-99 ref|XP_006826767.1| PREDICTED: pentatricopeptide repeat-containi... 367 4e-99 ref|XP_012480307.1| PREDICTED: pentatricopeptide repeat-containi... 365 1e-98 ref|XP_012480303.1| PREDICTED: pentatricopeptide repeat-containi... 365 1e-98 emb|CDO97549.1| unnamed protein product [Coffea canephora] 365 1e-98 gb|KMZ71904.1| putative Pentatricopeptide repeat-containing prot... 364 3e-98 ref|XP_007042228.1| Pentatricopeptide repeat (PPR) superfamily p... 364 3e-98 ref|XP_007042227.1| Pentatricopeptide repeat superfamily protein... 364 3e-98 gb|KHG18259.1| hypothetical protein F383_23175 [Gossypium arboreum] 364 4e-98 gb|KHG18258.1| hypothetical protein F383_23175 [Gossypium arboreum] 364 4e-98 >ref|XP_010242769.1| PREDICTED: pentatricopeptide repeat-containing protein At1g10910, chloroplastic isoform X2 [Nelumbo nucifera] Length = 659 Score = 391 bits (1005), Expect = e-106 Identities = 189/259 (72%), Positives = 229/259 (88%) Frame = -1 Query: 778 VRGGLFEKSRELLVKLEAMGFAEEEMPYCIIMDGLVKAGHIDEAKVVFEEMRNKNVKSDG 599 VRGGLFEKSRELLVKL+++G+A +EMPYC++MDGL KAGHIDEA +VF+EMR K VKS+G Sbjct: 321 VRGGLFEKSRELLVKLDSLGYAGDEMPYCLLMDGLAKAGHIDEAILVFDEMRKKEVKSEG 380 Query: 598 YSHSIMISAFCRNGLLEDAKQLARDFEATYEKYDLVLLNNLLRAYCKAGDMKSVMQMLKK 419 YSHSIMISAFCR G L++AKQLARD+EA Y+KYDLV+ N LLRA+C+AG+M+SVMQ+L+K Sbjct: 381 YSHSIMISAFCRVGQLKEAKQLARDYEARYDKYDLVMSNTLLRAFCRAGEMESVMQILRK 440 Query: 418 MDELAISPDRKTFHILANYYCKEKLYQLAYRMVEDMHSKGHLLDEILCSSLIFQLGRAGA 239 MDEL ISPD TFHIL Y+CKEKLY LAYR +EDMHSKGH DE LCSSLI LG+ GA Sbjct: 441 MDELRISPDWNTFHILIKYFCKEKLYHLAYRTMEDMHSKGHQPDEELCSSLILHLGKVGA 500 Query: 238 SSEAYSVYNMLRYSKRAVSKALHEKILNILVAGGLLKEAYVVMKDNAKFISRLSQKRFAL 59 +SEA SVYNMLRYSKR + KALH K+L+ILVAGGLLK+AYVV KDN++FIS+ + K+FA+ Sbjct: 501 ASEALSVYNMLRYSKRTMCKALHGKVLDILVAGGLLKDAYVVAKDNSRFISQATLKKFAV 560 Query: 58 SFLKSGNINVINDVIKALH 2 +F+KSGNIN+INDV+KA+H Sbjct: 561 AFMKSGNINLINDVVKAVH 579 Score = 65.1 bits (157), Expect = 5e-08 Identities = 46/226 (20%), Positives = 103/226 (45%), Gaps = 1/226 (0%) Frame = -1 Query: 778 VRGGLFEKSRELLVKLEAMGFAEEEMPYCIIMDGLVKAGH-IDEAKVVFEEMRNKNVKSD 602 ++ G FE S +L +++ G + + Y ++ G +K H +A + +E++ + +D Sbjct: 180 IKNGKFESSIKLFDQMKQSGLQPDAVTYSSLLAGCIKVKHGFSKAMQLVQEIKYNGLHTD 239 Query: 601 GYSHSIMISAFCRNGLLEDAKQLARDFEATYEKYDLVLLNNLLRAYCKAGDMKSVMQMLK 422 + +I+ N +++A+ + ++ ++LL AY G+ +++K Sbjct: 240 DVIYGTLIAICATNNRIKEAEAYFEQMKYEGFSPNVFHYSSLLNAYSADGNYMKADELVK 299 Query: 421 KMDELAISPDRKTFHILANYYCKEKLYQLAYRMVEDMHSKGHLLDEILCSSLIFQLGRAG 242 M + P++ L Y + L++ + ++ + S G+ DE+ L+ L +AG Sbjct: 300 DMRSEGLVPNKVILTTLLKVYVRGGLFEKSRELLVKLDSLGYAGDEMPYCLLMDGLAKAG 359 Query: 241 ASSEAYSVYNMLRYSKRAVSKALHEKILNILVAGGLLKEAYVVMKD 104 EA V++ +R + H +++ G LKEA + +D Sbjct: 360 HIDEAILVFDEMRKKEVKSEGYSHSIMISAFCRVGQLKEAKQLARD 405 >ref|XP_010242768.1| PREDICTED: pentatricopeptide repeat-containing protein At1g10910, chloroplastic isoform X1 [Nelumbo nucifera] Length = 662 Score = 391 bits (1005), Expect = e-106 Identities = 189/259 (72%), Positives = 229/259 (88%) Frame = -1 Query: 778 VRGGLFEKSRELLVKLEAMGFAEEEMPYCIIMDGLVKAGHIDEAKVVFEEMRNKNVKSDG 599 VRGGLFEKSRELLVKL+++G+A +EMPYC++MDGL KAGHIDEA +VF+EMR K VKS+G Sbjct: 324 VRGGLFEKSRELLVKLDSLGYAGDEMPYCLLMDGLAKAGHIDEAILVFDEMRKKEVKSEG 383 Query: 598 YSHSIMISAFCRNGLLEDAKQLARDFEATYEKYDLVLLNNLLRAYCKAGDMKSVMQMLKK 419 YSHSIMISAFCR G L++AKQLARD+EA Y+KYDLV+ N LLRA+C+AG+M+SVMQ+L+K Sbjct: 384 YSHSIMISAFCRVGQLKEAKQLARDYEARYDKYDLVMSNTLLRAFCRAGEMESVMQILRK 443 Query: 418 MDELAISPDRKTFHILANYYCKEKLYQLAYRMVEDMHSKGHLLDEILCSSLIFQLGRAGA 239 MDEL ISPD TFHIL Y+CKEKLY LAYR +EDMHSKGH DE LCSSLI LG+ GA Sbjct: 444 MDELRISPDWNTFHILIKYFCKEKLYHLAYRTMEDMHSKGHQPDEELCSSLILHLGKVGA 503 Query: 238 SSEAYSVYNMLRYSKRAVSKALHEKILNILVAGGLLKEAYVVMKDNAKFISRLSQKRFAL 59 +SEA SVYNMLRYSKR + KALH K+L+ILVAGGLLK+AYVV KDN++FIS+ + K+FA+ Sbjct: 504 ASEALSVYNMLRYSKRTMCKALHGKVLDILVAGGLLKDAYVVAKDNSRFISQATLKKFAV 563 Query: 58 SFLKSGNINVINDVIKALH 2 +F+KSGNIN+INDV+KA+H Sbjct: 564 AFMKSGNINLINDVVKAVH 582 Score = 65.1 bits (157), Expect = 5e-08 Identities = 46/226 (20%), Positives = 103/226 (45%), Gaps = 1/226 (0%) Frame = -1 Query: 778 VRGGLFEKSRELLVKLEAMGFAEEEMPYCIIMDGLVKAGH-IDEAKVVFEEMRNKNVKSD 602 ++ G FE S +L +++ G + + Y ++ G +K H +A + +E++ + +D Sbjct: 183 IKNGKFESSIKLFDQMKQSGLQPDAVTYSSLLAGCIKVKHGFSKAMQLVQEIKYNGLHTD 242 Query: 601 GYSHSIMISAFCRNGLLEDAKQLARDFEATYEKYDLVLLNNLLRAYCKAGDMKSVMQMLK 422 + +I+ N +++A+ + ++ ++LL AY G+ +++K Sbjct: 243 DVIYGTLIAICATNNRIKEAEAYFEQMKYEGFSPNVFHYSSLLNAYSADGNYMKADELVK 302 Query: 421 KMDELAISPDRKTFHILANYYCKEKLYQLAYRMVEDMHSKGHLLDEILCSSLIFQLGRAG 242 M + P++ L Y + L++ + ++ + S G+ DE+ L+ L +AG Sbjct: 303 DMRSEGLVPNKVILTTLLKVYVRGGLFEKSRELLVKLDSLGYAGDEMPYCLLMDGLAKAG 362 Query: 241 ASSEAYSVYNMLRYSKRAVSKALHEKILNILVAGGLLKEAYVVMKD 104 EA V++ +R + H +++ G LKEA + +D Sbjct: 363 HIDEAILVFDEMRKKEVKSEGYSHSIMISAFCRVGQLKEAKQLARD 408 >ref|XP_002270184.2| PREDICTED: pentatricopeptide repeat-containing protein At1g10910, chloroplastic [Vitis vinifera] gi|298204537|emb|CBI23812.3| unnamed protein product [Vitis vinifera] Length = 659 Score = 373 bits (958), Expect = e-101 Identities = 183/259 (70%), Positives = 223/259 (86%) Frame = -1 Query: 778 VRGGLFEKSRELLVKLEAMGFAEEEMPYCIIMDGLVKAGHIDEAKVVFEEMRNKNVKSDG 599 VRGGLFEKSRELL +LE +G+AE+EMPYC++MDGL K+ I EAK +FEEM+ K VKSDG Sbjct: 322 VRGGLFEKSRELLAELEDLGYAEDEMPYCLLMDGLAKSRRILEAKSIFEEMKKKQVKSDG 381 Query: 598 YSHSIMISAFCRNGLLEDAKQLARDFEATYEKYDLVLLNNLLRAYCKAGDMKSVMQMLKK 419 Y +SIMISAFCR+GLL++AKQLARDFEATY+KYDLV+LN +L AYC+AG+M+SVMQM++K Sbjct: 382 YCYSIMISAFCRSGLLKEAKQLARDFEATYDKYDLVMLNTMLCAYCRAGEMESVMQMMRK 441 Query: 418 MDELAISPDRKTFHILANYYCKEKLYQLAYRMVEDMHSKGHLLDEILCSSLIFQLGRAGA 239 MDELAISPD TFHIL Y+CKEKLY LAYR +EDMH+KGH +E LCSSLI LG+ A Sbjct: 442 MDELAISPDWNTFHILIKYFCKEKLYLLAYRTMEDMHNKGHQPEEELCSSLISHLGKIRA 501 Query: 238 SSEAYSVYNMLRYSKRAVSKALHEKILNILVAGGLLKEAYVVMKDNAKFISRLSQKRFAL 59 S+A+SVYNMLRYSKR + KALHEKIL+ILVAG LLK+AYVV+KDN IS+ S K+FA Sbjct: 502 HSQAFSVYNMLRYSKRTMCKALHEKILHILVAGRLLKDAYVVVKDNEGLISKPSIKKFAT 561 Query: 58 SFLKSGNINVINDVIKALH 2 +F+K GN+N+INDV+KA+H Sbjct: 562 AFMKFGNVNLINDVMKAIH 580 Score = 65.9 bits (159), Expect = 3e-08 Identities = 44/226 (19%), Positives = 100/226 (44%), Gaps = 1/226 (0%) Frame = -1 Query: 778 VRGGLFEKSRELLVKLEAMGFAEEEMPYCIIMDGLVKAGH-IDEAKVVFEEMRNKNVKSD 602 +R G FE S +L +++ G + + Y ++ G +K H +A + +EM + D Sbjct: 181 IRNGKFENSLKLFHQMKQDGLRPDAVTYSTLLAGCMKVKHGYSKALELVQEMERSRLPMD 240 Query: 601 GYSHSIMISAFCRNGLLEDAKQLARDFEATYEKYDLVLLNNLLRAYCKAGDMKSVMQMLK 422 + +++ N ++A+ + ++ ++LL AY GD K +++ Sbjct: 241 SVIYGTLLAVCASNNRCKEAENYFNQMKDEGHLPNVFHYSSLLNAYSADGDYKKADMLVQ 300 Query: 421 KMDELAISPDRKTFHILANYYCKEKLYQLAYRMVEDMHSKGHLLDEILCSSLIFQLGRAG 242 M + P++ L Y + L++ + ++ ++ G+ DE+ L+ L ++ Sbjct: 301 DMKSAGLVPNKVILTTLLKVYVRGGLFEKSRELLAELEDLGYAEDEMPYCLLMDGLAKSR 360 Query: 241 ASSEAYSVYNMLRYSKRAVSKALHEKILNILVAGGLLKEAYVVMKD 104 EA S++ ++ + + +++ GLLKEA + +D Sbjct: 361 RILEAKSIFEEMKKKQVKSDGYCYSIMISAFCRSGLLKEAKQLARD 406 >ref|XP_008339355.1| PREDICTED: pentatricopeptide repeat-containing protein At1g10910, chloroplastic [Malus domestica] Length = 664 Score = 372 bits (956), Expect = e-100 Identities = 181/258 (70%), Positives = 224/258 (86%) Frame = -1 Query: 778 VRGGLFEKSRELLVKLEAMGFAEEEMPYCIIMDGLVKAGHIDEAKVVFEEMRNKNVKSDG 599 VRGGLFEKSRELL +LEA+G+AE+EMPYC++MD L KAG I EAK+VF+EM+ K+V+SDG Sbjct: 321 VRGGLFEKSRELLGELEALGYAEDEMPYCLLMDALAKAGRIHEAKLVFQEMKEKSVRSDG 380 Query: 598 YSHSIMISAFCRNGLLEDAKQLARDFEATYEKYDLVLLNNLLRAYCKAGDMKSVMQMLKK 419 YS+SIMISAFCR GLLEDAKQLA+DFE T+++YDLV+LN ++ AYC+AGDM SVM+M++K Sbjct: 381 YSYSIMISAFCRGGLLEDAKQLAKDFEGTHDRYDLVMLNTMICAYCRAGDMDSVMEMMRK 440 Query: 418 MDELAISPDRKTFHILANYYCKEKLYQLAYRMVEDMHSKGHLLDEILCSSLIFQLGRAGA 239 MDEL I+PD TFHIL Y+CKEKLY LAY+ +EDMH+KGH DE LCSSL+F LG+ A Sbjct: 441 MDELKITPDYNTFHILIKYFCKEKLYLLAYQTMEDMHNKGHQPDEELCSSLMFLLGKIRA 500 Query: 238 SSEAYSVYNMLRYSKRAVSKALHEKILNILVAGGLLKEAYVVMKDNAKFISRLSQKRFAL 59 SEAYSVYNMLRYSKR + KALHEKIL+ILVAG LL++AYVV+KDNA IS+ + K+FA Sbjct: 501 YSEAYSVYNMLRYSKRTMCKALHEKILHILVAGQLLRDAYVVVKDNAGLISKPAIKKFAT 560 Query: 58 SFLKSGNINVINDVIKAL 5 +F+K GNIN+INDV+KA+ Sbjct: 561 AFMKLGNINLINDVLKAV 578 Score = 64.7 bits (156), Expect = 7e-08 Identities = 44/226 (19%), Positives = 104/226 (46%), Gaps = 1/226 (0%) Frame = -1 Query: 778 VRGGLFEKSRELLVKLEAMGFAEEEMPYCIIMDGLVKAGH-IDEAKVVFEEMRNKNVKSD 602 +R G F+ S +L +++ G + + Y ++ G K + ++A +E++ ++ D Sbjct: 180 IRSGKFDVSFKLFDQMKQNGLTPDAVTYSTLLAGCSKLKNGYNKALEFVQELQRNELQMD 239 Query: 601 GYSHSIMISAFCRNGLLEDAKQLARDFEATYEKYDLVLLNNLLRAYCKAGDMKSVMQMLK 422 + +++ N LE+A+ + + ++ ++LL AY G+ K +++ Sbjct: 240 SVIYGTLLAVCASNNKLEEAEGYFKKMKDEGHSPNVYHYSSLLNAYSMRGNYKEADXLVQ 299 Query: 421 KMDELAISPDRKTFHILANYYCKEKLYQLAYRMVEDMHSKGHLLDEILCSSLIFQLGRAG 242 M + P++ L Y + L++ + ++ ++ + G+ DE+ L+ L +AG Sbjct: 300 DMKSAGLVPNKVILTTLLKVYVRGGLFEKSRELLGELEALGYAEDEMPYCLLMDALAKAG 359 Query: 241 ASSEAYSVYNMLRYSKRAVSKALHEKILNILVAGGLLKEAYVVMKD 104 EA V+ ++ + +++ GGLL++A + KD Sbjct: 360 RIHEAKLVFQEMKEKSVRSDGYSYSIMISAFCRGGLLEDAKQLAKD 405 >ref|XP_009393978.1| PREDICTED: pentatricopeptide repeat-containing protein At1g10910, chloroplastic [Musa acuminata subsp. malaccensis] Length = 668 Score = 370 bits (951), Expect = e-100 Identities = 176/258 (68%), Positives = 220/258 (85%) Frame = -1 Query: 775 RGGLFEKSRELLVKLEAMGFAEEEMPYCIIMDGLVKAGHIDEAKVVFEEMRNKNVKSDGY 596 RG LFEKS ELL +LEA+G+AE+EMPYCIIMD L KAGH+ E K +F M+ ++VKSDGY Sbjct: 327 RGHLFEKSEELLSELEALGYAEDEMPYCIIMDNLAKAGHLSEVKRIFARMKERDVKSDGY 386 Query: 595 SHSIMISAFCRNGLLEDAKQLARDFEATYEKYDLVLLNNLLRAYCKAGDMKSVMQMLKKM 416 S+S+MISA CR+GLL++AKQLA+DFEA Y++YDLV+LN LLRAYC +GDM+SVMQMLKK+ Sbjct: 387 SYSVMISALCRSGLLKEAKQLAKDFEAKYDRYDLVMLNTLLRAYCNSGDMESVMQMLKKL 446 Query: 415 DELAISPDRKTFHILANYYCKEKLYQLAYRMVEDMHSKGHLLDEILCSSLIFQLGRAGAS 236 DEL+ISPD TFHIL Y+C+EKLY LAYR EDM+ KGH L+E LCSSLI QLG++G Sbjct: 447 DELSISPDWNTFHILIKYFCREKLYHLAYRTTEDMYGKGHQLNEELCSSLILQLGQSGFP 506 Query: 235 SEAYSVYNMLRYSKRAVSKALHEKILNILVAGGLLKEAYVVMKDNAKFISRLSQKRFALS 56 SEA+S+YNMLRYSKR + K+LHE+I++ILVA GLLK+AY+V+KDN +S +RFA+S Sbjct: 507 SEAFSIYNMLRYSKRTLCKSLHERIVDILVAAGLLKDAYIVVKDNTPLLSEKCLERFAIS 566 Query: 55 FLKSGNINVINDVIKALH 2 F+KSGNIN+INDV+KALH Sbjct: 567 FMKSGNINLINDVLKALH 584 Score = 71.2 bits (173), Expect = 7e-10 Identities = 52/262 (19%), Positives = 117/262 (44%), Gaps = 4/262 (1%) Frame = -1 Query: 778 VRGGLFEKSRELLVKLEAMGFAEEEMPYCIIMDGLVKAGH-IDEAKVVFEEMRNKNVKSD 602 V G FE S L +++ G + + Y ++ G +K + +A + +E+R+K + D Sbjct: 185 VTNGRFESSMRLFEQMKDDGLLPDLVTYSTLLSGWIKVKNGYSKAMQLVQELRSKGLHMD 244 Query: 601 GYSHSIMISAFCRNGLLEDAKQLARDFEATYEKYDLVLLNNLLRAYCKAGDMKSVMQMLK 422 + +++ N L E+A+ + + ++ N+LL AY G+ +++ Sbjct: 245 SVIYGSLLAICASNNLCEEAEMYFQQMKNEGHPPNVFHYNSLLNAYSVDGNYMKAEKLVN 304 Query: 421 KMDELAISPDRKTFHILANYYCKEKLYQLAYRMVEDMHSKGHLLDEILCSSLIFQLGRAG 242 M + P++ Y + L++ + ++ ++ + G+ DE+ ++ L +AG Sbjct: 305 DMKSSGLVPNKVIMTTFLKVYARGHLFEKSEELLSELEALGYAEDEMPYCIIMDNLAKAG 364 Query: 241 ASSEAYSVYNMLRYSKRAVSKALHEKILNILVAGGLLKEAYVVMKD-NAKF--ISRLSQK 71 SE ++ ++ + +++ L GLLKEA + KD AK+ + Sbjct: 365 HLSEVKRIFARMKERDVKSDGYSYSVMISALCRSGLLKEAKQLAKDFEAKYDRYDLVMLN 424 Query: 70 RFALSFLKSGNINVINDVIKAL 5 ++ SG++ + ++K L Sbjct: 425 TLLRAYCNSGDMESVMQMLKKL 446 >ref|XP_008797917.1| PREDICTED: pentatricopeptide repeat-containing protein At1g10910, chloroplastic-like [Phoenix dactylifera] Length = 519 Score = 369 bits (948), Expect = e-99 Identities = 176/258 (68%), Positives = 217/258 (84%) Frame = -1 Query: 775 RGGLFEKSRELLVKLEAMGFAEEEMPYCIIMDGLVKAGHIDEAKVVFEEMRNKNVKSDGY 596 RGGLFEKS+ELL +LE +G+AE+EMPYC++MD L KAGHI EAK +F EM+ K+VKS GY Sbjct: 178 RGGLFEKSKELLAELEFLGYAEDEMPYCLLMDSLAKAGHIQEAKALFAEMKQKHVKSAGY 237 Query: 595 SHSIMISAFCRNGLLEDAKQLARDFEATYEKYDLVLLNNLLRAYCKAGDMKSVMQMLKKM 416 +HSI+ISA CR+GLL++ + LA++FEA Y KYDLV+LN LLRAYC AGDM SVMQ+L KM Sbjct: 238 AHSIIISALCRSGLLKEGRTLAKEFEANYNKYDLVMLNTLLRAYCNAGDMDSVMQVLGKM 297 Query: 415 DELAISPDRKTFHILANYYCKEKLYQLAYRMVEDMHSKGHLLDEILCSSLIFQLGRAGAS 236 DELAISPD TFHIL Y+CKEKLY LAYR +EDMH +GH ++E LCSSLI QLG++G Sbjct: 298 DELAISPDWNTFHILIKYFCKEKLYHLAYRTIEDMHGRGHQINEELCSSLILQLGQSGFP 357 Query: 235 SEAYSVYNMLRYSKRAVSKALHEKILNILVAGGLLKEAYVVMKDNAKFISRLSQKRFALS 56 SEA+SVYNMLRYSKR + K++HEK+L++LVA GLLK+AY+VMKDN K IS S +FA+S Sbjct: 358 SEAFSVYNMLRYSKRTLCKSIHEKMLDLLVAAGLLKDAYIVMKDNMKLISTSSLDKFAVS 417 Query: 55 FLKSGNINVINDVIKALH 2 F++SGNIN+INDV KA H Sbjct: 418 FMRSGNINLINDVFKAFH 435 >ref|XP_011464850.1| PREDICTED: pentatricopeptide repeat-containing protein At1g10910, chloroplastic [Fragaria vesca subsp. vesca] gi|764588032|ref|XP_011464851.1| PREDICTED: pentatricopeptide repeat-containing protein At1g10910, chloroplastic [Fragaria vesca subsp. vesca] Length = 642 Score = 369 bits (948), Expect = e-99 Identities = 175/258 (67%), Positives = 223/258 (86%) Frame = -1 Query: 778 VRGGLFEKSRELLVKLEAMGFAEEEMPYCIIMDGLVKAGHIDEAKVVFEEMRNKNVKSDG 599 VRGGLFEKSRELL +LEA+G+AE+EMPYCI+MD KAG I++AK+VF+E++ K+V+SDG Sbjct: 305 VRGGLFEKSRELLTELEALGYAEDEMPYCILMDAFAKAGRIEDAKLVFDEIKEKSVRSDG 364 Query: 598 YSHSIMISAFCRNGLLEDAKQLARDFEATYEKYDLVLLNNLLRAYCKAGDMKSVMQMLKK 419 YS+SIMISAFCR GL++DAKQLA+DFE TY+KYDLV+LN ++ AYC+AG+M SVM+ML+K Sbjct: 365 YSYSIMISAFCRGGLVDDAKQLAKDFERTYDKYDLVMLNTMICAYCRAGEMDSVMEMLRK 424 Query: 418 MDELAISPDRKTFHILANYYCKEKLYQLAYRMVEDMHSKGHLLDEILCSSLIFQLGRAGA 239 MDEL I+PD TFHIL Y+CKEKLY LAY+ +EDMH+KG+ DE LCSSL+F LG+ A Sbjct: 425 MDELKITPDNNTFHILIKYFCKEKLYMLAYKTMEDMHNKGYPPDEELCSSLMFHLGKIRA 484 Query: 238 SSEAYSVYNMLRYSKRAVSKALHEKILNILVAGGLLKEAYVVMKDNAKFISRLSQKRFAL 59 SEAYS+YN+LRYSKR + KALHEKIL+ILVAG LLK+AYVV+KDN + IS+ + +FA Sbjct: 485 YSEAYSIYNILRYSKRTMCKALHEKILHILVAGRLLKDAYVVVKDNPRLISKAATMKFAT 544 Query: 58 SFLKSGNINVINDVIKAL 5 +F+K GNIN+INDV+KA+ Sbjct: 545 AFMKLGNINLINDVLKAI 562 Score = 66.2 bits (160), Expect = 2e-08 Identities = 44/226 (19%), Positives = 105/226 (46%), Gaps = 1/226 (0%) Frame = -1 Query: 778 VRGGLFEKSRELLVKLEAMGFAEEEMPYCIIMDGLVKAGH-IDEAKVVFEEMRNKNVKSD 602 VR G F+ S +L +++ G + + Y ++ G +K H +A + +E++N ++ D Sbjct: 164 VRSGKFDGSIKLFHQMKQDGLTPDAVTYSTLLAGCIKFKHGYSKALELVQELQNNELQMD 223 Query: 601 GYSHSIMISAFCRNGLLEDAKQLARDFEATYEKYDLVLLNNLLRAYCKAGDMKSVMQMLK 422 + +++ N E+A+ + + + ++LL AY +G+ K +++ Sbjct: 224 SVIYGTLLAICASNNKWEEAESYFKQMKDEGHLPNEFHYSSLLNAYSISGNYKKADDVVQ 283 Query: 421 KMDELAISPDRKTFHILANYYCKEKLYQLAYRMVEDMHSKGHLLDEILCSSLIFQLGRAG 242 M + P++ T L Y + L++ + ++ ++ + G+ DE+ L+ +AG Sbjct: 284 DMKSAGLVPNKVTLTTLLKAYVRGGLFEKSRELLTELEALGYAEDEMPYCILMDAFAKAG 343 Query: 241 ASSEAYSVYNMLRYSKRAVSKALHEKILNILVAGGLLKEAYVVMKD 104 +A V++ ++ + +++ GGL+ +A + KD Sbjct: 344 RIEDAKLVFDEIKEKSVRSDGYSYSIMISAFCRGGLVDDAKQLAKD 389 Score = 59.3 bits (142), Expect = 3e-06 Identities = 40/187 (21%), Positives = 91/187 (48%) Frame = -1 Query: 763 FEKSRELLVKLEAMGFAEEEMPYCIIMDGLVKAGHIDEAKVVFEEMRNKNVKSDGYSHSI 584 +E++ +++ G E Y +++ +G+ +A V ++M++ + + + + Sbjct: 240 WEEAESYFKQMKDEGHLPNEFHYSSLLNAYSISGNYKKADDVVQDMKSAGLVPNKVTLTT 299 Query: 583 MISAFCRNGLLEDAKQLARDFEATYEKYDLVLLNNLLRAYCKAGDMKSVMQMLKKMDELA 404 ++ A+ R GL E +++L + EA D + L+ A+ KAG ++ + ++ E + Sbjct: 300 LLKAYVRGGLFEKSRELLTELEALGYAEDEMPYCILMDAFAKAGRIEDAKLVFDEIKEKS 359 Query: 403 ISPDRKTFHILANYYCKEKLYQLAYRMVEDMHSKGHLLDEILCSSLIFQLGRAGASSEAY 224 + D ++ I+ + +C+ L A ++ +D D ++ +++I RAG E Sbjct: 360 VRSDGYSYSIMISAFCRGGLVDDAKQLAKDFERTYDKYDLVMLNTMICAYCRAG---EMD 416 Query: 223 SVYNMLR 203 SV MLR Sbjct: 417 SVMEMLR 423 >ref|XP_010911329.1| PREDICTED: pentatricopeptide repeat-containing protein At1g10910, chloroplastic [Elaeis guineensis] gi|743755472|ref|XP_010911463.1| PREDICTED: pentatricopeptide repeat-containing protein At1g10910, chloroplastic [Elaeis guineensis] Length = 658 Score = 368 bits (945), Expect = 2e-99 Identities = 177/258 (68%), Positives = 217/258 (84%) Frame = -1 Query: 775 RGGLFEKSRELLVKLEAMGFAEEEMPYCIIMDGLVKAGHIDEAKVVFEEMRNKNVKSDGY 596 RGGLFEKS+ELL +LE +G+AE+EMPYC++MDGL KAGHI EAK +F EM+ K+VKSDGY Sbjct: 317 RGGLFEKSKELLAELEFLGYAEDEMPYCLLMDGLAKAGHIHEAKALFAEMKQKHVKSDGY 376 Query: 595 SHSIMISAFCRNGLLEDAKQLARDFEATYEKYDLVLLNNLLRAYCKAGDMKSVMQMLKKM 416 +HSIMISA CR GLL++ + LA++FEA KYDLV+LN LLRAYC GDM SVMQ+L KM Sbjct: 377 AHSIMISALCRGGLLKEGRILAKEFEANCNKYDLVMLNTLLRAYCNTGDMDSVMQVLGKM 436 Query: 415 DELAISPDRKTFHILANYYCKEKLYQLAYRMVEDMHSKGHLLDEILCSSLIFQLGRAGAS 236 D+LAISPD TFHIL Y+CKEKLY LAYR +EDMH +GH L+E LCSSLI QLG++G Sbjct: 437 DKLAISPDWNTFHILIKYFCKEKLYHLAYRTIEDMHGRGHQLNEDLCSSLILQLGQSGFP 496 Query: 235 SEAYSVYNMLRYSKRAVSKALHEKILNILVAGGLLKEAYVVMKDNAKFISRLSQKRFALS 56 SEA+SVYNMLRYSKR + K++HEK+L++LVA GLLK+AYVVMKDN ++IS S +FA+S Sbjct: 497 SEAFSVYNMLRYSKRTLCKSIHEKMLDLLVAAGLLKDAYVVMKDNMEWISTSSLDKFAVS 556 Query: 55 FLKSGNINVINDVIKALH 2 F++SGNIN+INDV KA H Sbjct: 557 FMRSGNINLINDVFKAFH 574 Score = 72.0 bits (175), Expect = 4e-10 Identities = 49/226 (21%), Positives = 106/226 (46%), Gaps = 1/226 (0%) Frame = -1 Query: 778 VRGGLFEKSRELLVKLEAMGFAEEEMPYCIIMDGLVKAGH-IDEAKVVFEEMRNKNVKSD 602 V+ G FE S +L +++ G + + + Y ++ G K + +A + +E+ NK + D Sbjct: 175 VKNGRFESSIKLFNQMKDDGLSPDLVTYSTLLSGCRKLKNGYSKAMQLVQELENKGLHMD 234 Query: 601 GYSHSIMISAFCRNGLLEDAKQLARDFEATYEKYDLVLLNNLLRAYCKAGDMKSVMQMLK 422 G + +++ N L E+A+ + + +L ++LL AY G+ +++ Sbjct: 235 GVIYGTLLATCASNNLCEEAESYFQQMKDEGCPPNLFHYSSLLNAYSVDGNYVKAEKLVN 294 Query: 421 KMDELAISPDRKTFHILANYYCKEKLYQLAYRMVEDMHSKGHLLDEILCSSLIFQLGRAG 242 M + P++ L Y + L++ + ++ ++ G+ DE+ L+ L +AG Sbjct: 295 DMKSSGLVPNKVILTTLLKVYTRGGLFEKSKELLAELEFLGYAEDEMPYCLLMDGLAKAG 354 Query: 241 ASSEAYSVYNMLRYSKRAVSKALHEKILNILVAGGLLKEAYVVMKD 104 EA +++ ++ H +++ L GGLLKE ++ K+ Sbjct: 355 HIHEAKALFAEMKQKHVKSDGYAHSIMISALCRGGLLKEGRILAKE 400 >ref|XP_009618311.1| PREDICTED: pentatricopeptide repeat-containing protein At1g10910, chloroplastic isoform X3 [Nicotiana tomentosiformis] Length = 300 Score = 368 bits (945), Expect = 2e-99 Identities = 175/259 (67%), Positives = 227/259 (87%) Frame = -1 Query: 778 VRGGLFEKSRELLVKLEAMGFAEEEMPYCIIMDGLVKAGHIDEAKVVFEEMRNKNVKSDG 599 V+GGLFEKS+ELL +LEA G+A++EMP+C++MDGLVK+GH+ EAK VF+EM K+VK+DG Sbjct: 19 VKGGLFEKSKELLKELEAFGYAKDEMPFCLLMDGLVKSGHLLEAKSVFDEMMGKHVKTDG 78 Query: 598 YSHSIMISAFCRNGLLEDAKQLARDFEATYEKYDLVLLNNLLRAYCKAGDMKSVMQMLKK 419 YS+SIMISAFCR+GLLEDAK+LA +FE Y+KYD+V+LN +L AYC+AG+++++M M+KK Sbjct: 79 YSYSIMISAFCRSGLLEDAKKLASEFEEKYDKYDVVILNAMLSAYCRAGEIENIMSMMKK 138 Query: 418 MDELAISPDRKTFHILANYYCKEKLYQLAYRMVEDMHSKGHLLDEILCSSLIFQLGRAGA 239 MD+ AISPD TF+IL Y+CKEKLY LAYR +EDMH KGH +E LCSSLI+ LG+ A Sbjct: 139 MDDSAISPDWNTFNILIRYFCKEKLYLLAYRTMEDMHRKGHQPEEGLCSSLIYHLGKTDA 198 Query: 238 SSEAYSVYNMLRYSKRAVSKALHEKILNILVAGGLLKEAYVVMKDNAKFISRLSQKRFAL 59 SEA+SVYNMLRYSKR +SK+LHEKIL+IL+AG LLK+AYVV+KDNA FISR + KRFA+ Sbjct: 199 HSEAFSVYNMLRYSKRTISKSLHEKILHILIAGRLLKDAYVVVKDNAGFISRPAIKRFAV 258 Query: 58 SFLKSGNINVINDVIKALH 2 +F++SGN+N+INDV+KA+H Sbjct: 259 NFMRSGNVNLINDVMKAMH 277 >ref|XP_009618310.1| PREDICTED: pentatricopeptide repeat-containing protein At1g10910, chloroplastic isoform X2 [Nicotiana tomentosiformis] Length = 361 Score = 368 bits (945), Expect = 2e-99 Identities = 175/259 (67%), Positives = 227/259 (87%) Frame = -1 Query: 778 VRGGLFEKSRELLVKLEAMGFAEEEMPYCIIMDGLVKAGHIDEAKVVFEEMRNKNVKSDG 599 V+GGLFEKS+ELL +LEA G+A++EMP+C++MDGLVK+GH+ EAK VF+EM K+VK+DG Sbjct: 19 VKGGLFEKSKELLKELEAFGYAKDEMPFCLLMDGLVKSGHLLEAKSVFDEMMGKHVKTDG 78 Query: 598 YSHSIMISAFCRNGLLEDAKQLARDFEATYEKYDLVLLNNLLRAYCKAGDMKSVMQMLKK 419 YS+SIMISAFCR+GLLEDAK+LA +FE Y+KYD+V+LN +L AYC+AG+++++M M+KK Sbjct: 79 YSYSIMISAFCRSGLLEDAKKLASEFEEKYDKYDVVILNAMLSAYCRAGEIENIMSMMKK 138 Query: 418 MDELAISPDRKTFHILANYYCKEKLYQLAYRMVEDMHSKGHLLDEILCSSLIFQLGRAGA 239 MD+ AISPD TF+IL Y+CKEKLY LAYR +EDMH KGH +E LCSSLI+ LG+ A Sbjct: 139 MDDSAISPDWNTFNILIRYFCKEKLYLLAYRTMEDMHRKGHQPEEGLCSSLIYHLGKTDA 198 Query: 238 SSEAYSVYNMLRYSKRAVSKALHEKILNILVAGGLLKEAYVVMKDNAKFISRLSQKRFAL 59 SEA+SVYNMLRYSKR +SK+LHEKIL+IL+AG LLK+AYVV+KDNA FISR + KRFA+ Sbjct: 199 HSEAFSVYNMLRYSKRTISKSLHEKILHILIAGRLLKDAYVVVKDNAGFISRPAIKRFAV 258 Query: 58 SFLKSGNINVINDVIKALH 2 +F++SGN+N+INDV+KA+H Sbjct: 259 NFMRSGNVNLINDVMKAMH 277 >ref|XP_009618309.1| PREDICTED: pentatricopeptide repeat-containing protein At1g10910, chloroplastic isoform X1 [Nicotiana tomentosiformis] Length = 374 Score = 368 bits (945), Expect = 2e-99 Identities = 175/259 (67%), Positives = 227/259 (87%) Frame = -1 Query: 778 VRGGLFEKSRELLVKLEAMGFAEEEMPYCIIMDGLVKAGHIDEAKVVFEEMRNKNVKSDG 599 V+GGLFEKS+ELL +LEA G+A++EMP+C++MDGLVK+GH+ EAK VF+EM K+VK+DG Sbjct: 19 VKGGLFEKSKELLKELEAFGYAKDEMPFCLLMDGLVKSGHLLEAKSVFDEMMGKHVKTDG 78 Query: 598 YSHSIMISAFCRNGLLEDAKQLARDFEATYEKYDLVLLNNLLRAYCKAGDMKSVMQMLKK 419 YS+SIMISAFCR+GLLEDAK+LA +FE Y+KYD+V+LN +L AYC+AG+++++M M+KK Sbjct: 79 YSYSIMISAFCRSGLLEDAKKLASEFEEKYDKYDVVILNAMLSAYCRAGEIENIMSMMKK 138 Query: 418 MDELAISPDRKTFHILANYYCKEKLYQLAYRMVEDMHSKGHLLDEILCSSLIFQLGRAGA 239 MD+ AISPD TF+IL Y+CKEKLY LAYR +EDMH KGH +E LCSSLI+ LG+ A Sbjct: 139 MDDSAISPDWNTFNILIRYFCKEKLYLLAYRTMEDMHRKGHQPEEGLCSSLIYHLGKTDA 198 Query: 238 SSEAYSVYNMLRYSKRAVSKALHEKILNILVAGGLLKEAYVVMKDNAKFISRLSQKRFAL 59 SEA+SVYNMLRYSKR +SK+LHEKIL+IL+AG LLK+AYVV+KDNA FISR + KRFA+ Sbjct: 199 HSEAFSVYNMLRYSKRTISKSLHEKILHILIAGRLLKDAYVVVKDNAGFISRPAIKRFAV 258 Query: 58 SFLKSGNINVINDVIKALH 2 +F++SGN+N+INDV+KA+H Sbjct: 259 NFMRSGNVNLINDVMKAMH 277 >ref|XP_006826767.1| PREDICTED: pentatricopeptide repeat-containing protein At1g10910, chloroplastic [Amborella trichopoda] gi|548831187|gb|ERM94004.1| hypothetical protein AMTR_s00136p00085920 [Amborella trichopoda] Length = 690 Score = 367 bits (943), Expect = 4e-99 Identities = 178/259 (68%), Positives = 219/259 (84%) Frame = -1 Query: 778 VRGGLFEKSRELLVKLEAMGFAEEEMPYCIIMDGLVKAGHIDEAKVVFEEMRNKNVKSDG 599 VRG F+KSRELL +L+ +GFA +EMPYC++MDGL KAGHIDEAK VFE+M+ KNVKSDG Sbjct: 349 VRGCFFDKSRELLAELDTLGFARDEMPYCLLMDGLAKAGHIDEAKAVFEDMKQKNVKSDG 408 Query: 598 YSHSIMISAFCRNGLLEDAKQLARDFEATYEKYDLVLLNNLLRAYCKAGDMKSVMQMLKK 419 YSHSI+ISA+CR GLLE+AK LA+DFE+T KYDLV+LN LLRAYCK G+M+ VMQ +KK Sbjct: 409 YSHSIIISAYCREGLLEEAKLLAKDFESTSGKYDLVMLNTLLRAYCKGGEMQYVMQTMKK 468 Query: 418 MDELAISPDRKTFHILANYYCKEKLYQLAYRMVEDMHSKGHLLDEILCSSLIFQLGRAGA 239 MDELAISPD TF IL Y+ KEKLY LAYR VEDMH++G +DE LC+SLI +LG+AGA Sbjct: 469 MDELAISPDLHTFSILIKYFSKEKLYNLAYRTVEDMHARGLQIDEELCTSLILELGKAGA 528 Query: 238 SSEAYSVYNMLRYSKRAVSKALHEKILNILVAGGLLKEAYVVMKDNAKFISRLSQKRFAL 59 +SEAYSVYN LRY+KR + KALHEK+L ILVAG LLK+AYV++KDN++ IS+ + +F Sbjct: 529 ASEAYSVYNKLRYTKRTLCKALHEKVLKILVAGRLLKDAYVLVKDNSELISKSALDKFVT 588 Query: 58 SFLKSGNINVINDVIKALH 2 SF+K GNIN+INDV++ALH Sbjct: 589 SFMKFGNINLINDVLRALH 607 Score = 60.5 bits (145), Expect = 1e-06 Identities = 45/225 (20%), Positives = 100/225 (44%), Gaps = 1/225 (0%) Frame = -1 Query: 775 RGGLFEKSRELLVKLEAMGFAEEEMPYCIIMDGLVKAGH-IDEAKVVFEEMRNKNVKSDG 599 R G FE S +L +++ G + + Y ++ G K + +A + +E++ + D Sbjct: 209 RNGKFESSIKLFEQMKKGGLTPDTVTYSSLLAGCNKNKNGYSQALQLIKELKISGLCMDS 268 Query: 598 YSHSIMISAFCRNGLLEDAKQLARDFEATYEKYDLVLLNNLLRAYCKAGDMKSVMQMLKK 419 + +++ N E+A+ + A ++ ++LL AY G+ K ++++ Sbjct: 269 VIYGSLLAICASNNQCEEAETFFQQMRAEGFSPNIFHYSSLLNAYAVEGNHKKADKLVED 328 Query: 418 MDELAISPDRKTFHILANYYCKEKLYQLAYRMVEDMHSKGHLLDEILCSSLIFQLGRAGA 239 + + P++ L Y + + + ++ ++ + G DE+ L+ L +AG Sbjct: 329 IKSAGLVPNKVILTTLLKVYVRGCFFDKSRELLAELDTLGFARDEMPYCLLMDGLAKAGH 388 Query: 238 SSEAYSVYNMLRYSKRAVSKALHEKILNILVAGGLLKEAYVVMKD 104 EA +V+ ++ H I++ GLL+EA ++ KD Sbjct: 389 IDEAKAVFEDMKQKNVKSDGYSHSIIISAYCREGLLEEAKLLAKD 433 >ref|XP_012480307.1| PREDICTED: pentatricopeptide repeat-containing protein At1g10910, chloroplastic-like isoform X2 [Gossypium raimondii] gi|823160907|ref|XP_012480308.1| PREDICTED: pentatricopeptide repeat-containing protein At1g10910, chloroplastic-like isoform X2 [Gossypium raimondii] Length = 593 Score = 365 bits (938), Expect = 1e-98 Identities = 178/259 (68%), Positives = 219/259 (84%) Frame = -1 Query: 778 VRGGLFEKSRELLVKLEAMGFAEEEMPYCIIMDGLVKAGHIDEAKVVFEEMRNKNVKSDG 599 VRGGLFEKSR+LL +LEA+G+AE+EMPYC++MDGL KAG +DEA+ VF EM K VKSDG Sbjct: 318 VRGGLFEKSRKLLSELEALGYAEDEMPYCLLMDGLSKAGRLDEARSVFAEMHEKRVKSDG 377 Query: 598 YSHSIMISAFCRNGLLEDAKQLARDFEATYEKYDLVLLNNLLRAYCKAGDMKSVMQMLKK 419 YSHSIMISA CR+ L E+AK+LA+DFE Y KYDLV+LN +L AYC+AGDM+SVMQ +KK Sbjct: 378 YSHSIMISAMCRSELFEEAKKLAQDFETKYNKYDLVMLNTMLCAYCRAGDMESVMQTMKK 437 Query: 418 MDELAISPDRKTFHILANYYCKEKLYQLAYRMVEDMHSKGHLLDEILCSSLIFQLGRAGA 239 MDELAISPD TFHIL Y+CKEKLY LAY++++DMH KG+ +E LC SLIFQLG+ A Sbjct: 438 MDELAISPDYSTFHILIKYFCKEKLYLLAYKIMQDMHGKGYHPEEELCCSLIFQLGKMKA 497 Query: 238 SSEAYSVYNMLRYSKRAVSKALHEKILNILVAGGLLKEAYVVMKDNAKFISRLSQKRFAL 59 SEA+SVYNMLRYSKR + KALHEKIL+IL+AG L K+AYVV+KDNA+ IS+ + K+FA Sbjct: 498 HSEAFSVYNMLRYSKRTMCKALHEKILHILIAGKLFKDAYVVVKDNAEHISQPAIKKFAS 557 Query: 58 SFLKSGNINVINDVIKALH 2 +F+K GNIN+INDV+K +H Sbjct: 558 AFMKFGNINLINDVLKVIH 576 Score = 65.5 bits (158), Expect = 4e-08 Identities = 45/227 (19%), Positives = 107/227 (47%), Gaps = 2/227 (0%) Frame = -1 Query: 778 VRGGLFEKSRELLVKLEAMGFAEEEMPYCIIMDGLV--KAGHIDEAKVVFEEMRNKNVKS 605 VR G F+ +L K++ G + + Y ++ G + K GH +A + +E++ ++ Sbjct: 177 VRNGKFDSGIKLFDKMKQEGLTPDLVTYNTLLAGCIRIKNGHY-KALELMKELKYNGLEM 235 Query: 604 DGYSHSIMISAFCRNGLLEDAKQLARDFEATYEKYDLVLLNNLLRAYCKAGDMKSVMQML 425 D + +++ +GL E+A+ +L ++LL AY G+ + +++ Sbjct: 236 DNVMYGTLLAVCASSGLSEEAQNYFNQMRDEGLSPNLYHYSSLLNAYSYDGNYRKSDELM 295 Query: 424 KKMDELAISPDRKTFHILANYYCKEKLYQLAYRMVEDMHSKGHLLDEILCSSLIFQLGRA 245 +++ ++P++ L Y + L++ + +++ ++ + G+ DE+ L+ L +A Sbjct: 296 EELKSSGLAPNKVILTTLLKVYVRGGLFEKSRKLLSELEALGYAEDEMPYCLLMDGLSKA 355 Query: 244 GASSEAYSVYNMLRYSKRAVSKALHEKILNILVAGGLLKEAYVVMKD 104 G EA SV+ + + H +++ + L +EA + +D Sbjct: 356 GRLDEARSVFAEMHEKRVKSDGYSHSIMISAMCRSELFEEAKKLAQD 402 >ref|XP_012480303.1| PREDICTED: pentatricopeptide repeat-containing protein At1g10910, chloroplastic-like isoform X1 [Gossypium raimondii] gi|823160901|ref|XP_012480305.1| PREDICTED: pentatricopeptide repeat-containing protein At1g10910, chloroplastic-like isoform X1 [Gossypium raimondii] gi|823160903|ref|XP_012480306.1| PREDICTED: pentatricopeptide repeat-containing protein At1g10910, chloroplastic-like isoform X1 [Gossypium raimondii] gi|763765224|gb|KJB32478.1| hypothetical protein B456_005G242500 [Gossypium raimondii] Length = 656 Score = 365 bits (938), Expect = 1e-98 Identities = 178/259 (68%), Positives = 219/259 (84%) Frame = -1 Query: 778 VRGGLFEKSRELLVKLEAMGFAEEEMPYCIIMDGLVKAGHIDEAKVVFEEMRNKNVKSDG 599 VRGGLFEKSR+LL +LEA+G+AE+EMPYC++MDGL KAG +DEA+ VF EM K VKSDG Sbjct: 318 VRGGLFEKSRKLLSELEALGYAEDEMPYCLLMDGLSKAGRLDEARSVFAEMHEKRVKSDG 377 Query: 598 YSHSIMISAFCRNGLLEDAKQLARDFEATYEKYDLVLLNNLLRAYCKAGDMKSVMQMLKK 419 YSHSIMISA CR+ L E+AK+LA+DFE Y KYDLV+LN +L AYC+AGDM+SVMQ +KK Sbjct: 378 YSHSIMISAMCRSELFEEAKKLAQDFETKYNKYDLVMLNTMLCAYCRAGDMESVMQTMKK 437 Query: 418 MDELAISPDRKTFHILANYYCKEKLYQLAYRMVEDMHSKGHLLDEILCSSLIFQLGRAGA 239 MDELAISPD TFHIL Y+CKEKLY LAY++++DMH KG+ +E LC SLIFQLG+ A Sbjct: 438 MDELAISPDYSTFHILIKYFCKEKLYLLAYKIMQDMHGKGYHPEEELCCSLIFQLGKMKA 497 Query: 238 SSEAYSVYNMLRYSKRAVSKALHEKILNILVAGGLLKEAYVVMKDNAKFISRLSQKRFAL 59 SEA+SVYNMLRYSKR + KALHEKIL+IL+AG L K+AYVV+KDNA+ IS+ + K+FA Sbjct: 498 HSEAFSVYNMLRYSKRTMCKALHEKILHILIAGKLFKDAYVVVKDNAEHISQPAIKKFAS 557 Query: 58 SFLKSGNINVINDVIKALH 2 +F+K GNIN+INDV+K +H Sbjct: 558 AFMKFGNINLINDVLKVIH 576 Score = 65.5 bits (158), Expect = 4e-08 Identities = 45/227 (19%), Positives = 107/227 (47%), Gaps = 2/227 (0%) Frame = -1 Query: 778 VRGGLFEKSRELLVKLEAMGFAEEEMPYCIIMDGLV--KAGHIDEAKVVFEEMRNKNVKS 605 VR G F+ +L K++ G + + Y ++ G + K GH +A + +E++ ++ Sbjct: 177 VRNGKFDSGIKLFDKMKQEGLTPDLVTYNTLLAGCIRIKNGHY-KALELMKELKYNGLEM 235 Query: 604 DGYSHSIMISAFCRNGLLEDAKQLARDFEATYEKYDLVLLNNLLRAYCKAGDMKSVMQML 425 D + +++ +GL E+A+ +L ++LL AY G+ + +++ Sbjct: 236 DNVMYGTLLAVCASSGLSEEAQNYFNQMRDEGLSPNLYHYSSLLNAYSYDGNYRKSDELM 295 Query: 424 KKMDELAISPDRKTFHILANYYCKEKLYQLAYRMVEDMHSKGHLLDEILCSSLIFQLGRA 245 +++ ++P++ L Y + L++ + +++ ++ + G+ DE+ L+ L +A Sbjct: 296 EELKSSGLAPNKVILTTLLKVYVRGGLFEKSRKLLSELEALGYAEDEMPYCLLMDGLSKA 355 Query: 244 GASSEAYSVYNMLRYSKRAVSKALHEKILNILVAGGLLKEAYVVMKD 104 G EA SV+ + + H +++ + L +EA + +D Sbjct: 356 GRLDEARSVFAEMHEKRVKSDGYSHSIMISAMCRSELFEEAKKLAQD 402 >emb|CDO97549.1| unnamed protein product [Coffea canephora] Length = 669 Score = 365 bits (938), Expect = 1e-98 Identities = 173/259 (66%), Positives = 222/259 (85%) Frame = -1 Query: 778 VRGGLFEKSRELLVKLEAMGFAEEEMPYCIIMDGLVKAGHIDEAKVVFEEMRNKNVKSDG 599 VRGGLFEKSREL+ KL+ +G+AE+EMPYCI+MDGLVKAG + EAK +F+EM+NKNVK+DG Sbjct: 328 VRGGLFEKSRELINKLDKLGYAEDEMPYCILMDGLVKAGKVTEAKTLFDEMKNKNVKTDG 387 Query: 598 YSHSIMISAFCRNGLLEDAKQLARDFEATYEKYDLVLLNNLLRAYCKAGDMKSVMQMLKK 419 Y++SIMIS FCR GLL+DAKQLA +EA Y++YD+V+LN +L AYC+AG+M +VM+MLKK Sbjct: 388 YAYSIMISGFCRGGLLQDAKQLASSYEAKYDRYDIVILNTMLCAYCRAGEMDNVMKMLKK 447 Query: 418 MDELAISPDRKTFHILANYYCKEKLYQLAYRMVEDMHSKGHLLDEILCSSLIFQLGRAGA 239 +DE AISPD TFHIL Y+CKEKLY LAY ++DMH KGH +E LCSSLI LG+ GA Sbjct: 448 VDESAISPDWNTFHILIRYFCKEKLYILAYHTLDDMHKKGHQPEEELCSSLIHYLGKTGA 507 Query: 238 SSEAYSVYNMLRYSKRAVSKALHEKILNILVAGGLLKEAYVVMKDNAKFISRLSQKRFAL 59 +EA+SVYN+L+YSKR + ALHEKIL+ILVAG LLK+AY+++KDNA IS+ + ++FA+ Sbjct: 508 HAEAFSVYNILKYSKRTMCSALHEKILHILVAGRLLKDAYIIIKDNAGSISQSATQKFAV 567 Query: 58 SFLKSGNINVINDVIKALH 2 SF+KSGNIN++NDVIKA+H Sbjct: 568 SFMKSGNINLVNDVIKAIH 586 >gb|KMZ71904.1| putative Pentatricopeptide repeat-containing protein [Zostera marina] Length = 667 Score = 364 bits (935), Expect = 3e-98 Identities = 181/258 (70%), Positives = 214/258 (82%) Frame = -1 Query: 778 VRGGLFEKSRELLVKLEAMGFAEEEMPYCIIMDGLVKAGHIDEAKVVFEEMRNKNVKSDG 599 VRGGLFEK++ELL +LE+ G AE EMPYC++MD L KAGHI EAK +F++M KNVKSDG Sbjct: 323 VRGGLFEKAKELLAELESSGLAEAEMPYCLLMDSLAKAGHIQEAKAIFDDMIRKNVKSDG 382 Query: 598 YSHSIMISAFCRNGLLEDAKQLARDFEATYEKYDLVLLNNLLRAYCKAGDMKSVMQMLKK 419 Y +SIMISAFCR+ LLEDAK+LA DF+ Y KYDLV+LN LLRAYC GDM+S MQMLKK Sbjct: 383 YCYSIMISAFCRSRLLEDAKKLAMDFQMKYGKYDLVMLNTLLRAYCNMGDMESAMQMLKK 442 Query: 418 MDELAISPDRKTFHILANYYCKEKLYQLAYRMVEDMHSKGHLLDEILCSSLIFQLGRAGA 239 MDELAISPD TFHIL Y+CKEKLY LAYR VEDMH+KGH LDE LC SLI QL + A Sbjct: 443 MDELAISPDWNTFHILIKYFCKEKLYHLAYRTVEDMHNKGHRLDEELCFSLITQLSQNDA 502 Query: 238 SSEAYSVYNMLRYSKRAVSKALHEKILNILVAGGLLKEAYVVMKDNAKFISRLSQKRFAL 59 S+EA++VYNMLRYSKR V K+LHEK+L ILV LLK+AYVVMKDNA+ IS + + FAL Sbjct: 503 SAEAFNVYNMLRYSKRTVRKSLHEKMLIILVRAKLLKDAYVVMKDNAENISDHALRNFAL 562 Query: 58 SFLKSGNINVINDVIKAL 5 S++KSGN+N+INDV+KA+ Sbjct: 563 SYMKSGNVNMINDVVKAI 580 >ref|XP_007042228.1| Pentatricopeptide repeat (PPR) superfamily protein isoform 2 [Theobroma cacao] gi|508706163|gb|EOX98059.1| Pentatricopeptide repeat (PPR) superfamily protein isoform 2 [Theobroma cacao] Length = 649 Score = 364 bits (935), Expect = 3e-98 Identities = 179/259 (69%), Positives = 219/259 (84%) Frame = -1 Query: 778 VRGGLFEKSRELLVKLEAMGFAEEEMPYCIIMDGLVKAGHIDEAKVVFEEMRNKNVKSDG 599 VRGGLFEKS +LL +LEA+G+AE+EMP+C++MDGL KAG +DEA+ VF EM+ K VKSDG Sbjct: 316 VRGGLFEKSTKLLAELEALGYAEDEMPFCLLMDGLSKAGRLDEARSVFVEMQQKCVKSDG 375 Query: 598 YSHSIMISAFCRNGLLEDAKQLARDFEATYEKYDLVLLNNLLRAYCKAGDMKSVMQMLKK 419 YSHSIMISA CR GL E+AK+LA+DFEA Y KYDLV+LN +L AYC+AG+M+SVMQ +KK Sbjct: 376 YSHSIMISALCRAGLFEEAKELAQDFEAQYNKYDLVMLNTMLCAYCRAGEMESVMQTMKK 435 Query: 418 MDELAISPDRKTFHILANYYCKEKLYQLAYRMVEDMHSKGHLLDEILCSSLIFQLGRAGA 239 MDELAISPD TFHIL Y+CKEKLY LAY+ +EDMH KG+ +E LCSSLIFQLG+ A Sbjct: 436 MDELAISPDYNTFHILIKYFCKEKLYLLAYKTMEDMHGKGYHPEEELCSSLIFQLGKMKA 495 Query: 238 SSEAYSVYNMLRYSKRAVSKALHEKILNILVAGGLLKEAYVVMKDNAKFISRLSQKRFAL 59 EA+SVYNMLRYSKR + KALHEKIL+IL+AG LLK+AYVV+KDNA+ IS+ + +FA Sbjct: 496 HLEAFSVYNMLRYSKRTMCKALHEKILHILIAGQLLKDAYVVVKDNAELISQPAITKFAT 555 Query: 58 SFLKSGNINVINDVIKALH 2 +F+K GNIN+INDV+K LH Sbjct: 556 AFMKLGNINMINDVLKVLH 574 Score = 72.0 bits (175), Expect = 4e-10 Identities = 49/226 (21%), Positives = 105/226 (46%), Gaps = 1/226 (0%) Frame = -1 Query: 778 VRGGLFEKSRELLVKLEAMGFAEEEMPYCIIMDGLVKAGH-IDEAKVVFEEMRNKNVKSD 602 VR G FE +L K++ G + + Y ++ G +K H +A + +E++ +K D Sbjct: 175 VRNGKFESGIKLFDKMKQDGLTPDSVTYNTLLAGCIKIKHGHSKALELIKELKYNGLKMD 234 Query: 601 GYSHSIMISAFCRNGLLEDAKQLARDFEATYEKYDLVLLNNLLRAYCKAGDMKSVMQMLK 422 + +++ +GL E+A+ +L ++LL AY G+ ++++ Sbjct: 235 SVMYGTLLAVCASSGLHEEAQNYFNQMREEGHSPNLYHYSSLLNAYSYDGNYCKADELVE 294 Query: 421 KMDELAISPDRKTFHILANYYCKEKLYQLAYRMVEDMHSKGHLLDEILCSSLIFQLGRAG 242 +M + P++ L Y + L++ + +++ ++ + G+ DE+ L+ L +AG Sbjct: 295 QMKSSGLVPNKVILTTLLKVYVRGGLFEKSTKLLAELEALGYAEDEMPFCLLMDGLSKAG 354 Query: 241 ASSEAYSVYNMLRYSKRAVSKALHEKILNILVAGGLLKEAYVVMKD 104 EA SV+ ++ H +++ L GL +EA + +D Sbjct: 355 RLDEARSVFVEMQQKCVKSDGYSHSIMISALCRAGLFEEAKELAQD 400 >ref|XP_007042227.1| Pentatricopeptide repeat superfamily protein isoform 1 [Theobroma cacao] gi|508706162|gb|EOX98058.1| Pentatricopeptide repeat superfamily protein isoform 1 [Theobroma cacao] Length = 717 Score = 364 bits (935), Expect = 3e-98 Identities = 179/259 (69%), Positives = 219/259 (84%) Frame = -1 Query: 778 VRGGLFEKSRELLVKLEAMGFAEEEMPYCIIMDGLVKAGHIDEAKVVFEEMRNKNVKSDG 599 VRGGLFEKS +LL +LEA+G+AE+EMP+C++MDGL KAG +DEA+ VF EM+ K VKSDG Sbjct: 316 VRGGLFEKSTKLLAELEALGYAEDEMPFCLLMDGLSKAGRLDEARSVFVEMQQKCVKSDG 375 Query: 598 YSHSIMISAFCRNGLLEDAKQLARDFEATYEKYDLVLLNNLLRAYCKAGDMKSVMQMLKK 419 YSHSIMISA CR GL E+AK+LA+DFEA Y KYDLV+LN +L AYC+AG+M+SVMQ +KK Sbjct: 376 YSHSIMISALCRAGLFEEAKELAQDFEAQYNKYDLVMLNTMLCAYCRAGEMESVMQTMKK 435 Query: 418 MDELAISPDRKTFHILANYYCKEKLYQLAYRMVEDMHSKGHLLDEILCSSLIFQLGRAGA 239 MDELAISPD TFHIL Y+CKEKLY LAY+ +EDMH KG+ +E LCSSLIFQLG+ A Sbjct: 436 MDELAISPDYNTFHILIKYFCKEKLYLLAYKTMEDMHGKGYHPEEELCSSLIFQLGKMKA 495 Query: 238 SSEAYSVYNMLRYSKRAVSKALHEKILNILVAGGLLKEAYVVMKDNAKFISRLSQKRFAL 59 EA+SVYNMLRYSKR + KALHEKIL+IL+AG LLK+AYVV+KDNA+ IS+ + +FA Sbjct: 496 HLEAFSVYNMLRYSKRTMCKALHEKILHILIAGQLLKDAYVVVKDNAELISQPAITKFAT 555 Query: 58 SFLKSGNINVINDVIKALH 2 +F+K GNIN+INDV+K LH Sbjct: 556 AFMKLGNINMINDVLKVLH 574 Score = 72.0 bits (175), Expect = 4e-10 Identities = 49/226 (21%), Positives = 105/226 (46%), Gaps = 1/226 (0%) Frame = -1 Query: 778 VRGGLFEKSRELLVKLEAMGFAEEEMPYCIIMDGLVKAGH-IDEAKVVFEEMRNKNVKSD 602 VR G FE +L K++ G + + Y ++ G +K H +A + +E++ +K D Sbjct: 175 VRNGKFESGIKLFDKMKQDGLTPDSVTYNTLLAGCIKIKHGHSKALELIKELKYNGLKMD 234 Query: 601 GYSHSIMISAFCRNGLLEDAKQLARDFEATYEKYDLVLLNNLLRAYCKAGDMKSVMQMLK 422 + +++ +GL E+A+ +L ++LL AY G+ ++++ Sbjct: 235 SVMYGTLLAVCASSGLHEEAQNYFNQMREEGHSPNLYHYSSLLNAYSYDGNYCKADELVE 294 Query: 421 KMDELAISPDRKTFHILANYYCKEKLYQLAYRMVEDMHSKGHLLDEILCSSLIFQLGRAG 242 +M + P++ L Y + L++ + +++ ++ + G+ DE+ L+ L +AG Sbjct: 295 QMKSSGLVPNKVILTTLLKVYVRGGLFEKSTKLLAELEALGYAEDEMPFCLLMDGLSKAG 354 Query: 241 ASSEAYSVYNMLRYSKRAVSKALHEKILNILVAGGLLKEAYVVMKD 104 EA SV+ ++ H +++ L GL +EA + +D Sbjct: 355 RLDEARSVFVEMQQKCVKSDGYSHSIMISALCRAGLFEEAKELAQD 400 >gb|KHG18259.1| hypothetical protein F383_23175 [Gossypium arboreum] Length = 749 Score = 364 bits (934), Expect = 4e-98 Identities = 178/259 (68%), Positives = 218/259 (84%) Frame = -1 Query: 778 VRGGLFEKSRELLVKLEAMGFAEEEMPYCIIMDGLVKAGHIDEAKVVFEEMRNKNVKSDG 599 VRGGLFEKSR+LL +LEA+G+A++EMPYC++MDGL KAG +DEA+ VF EM K VKSDG Sbjct: 318 VRGGLFEKSRKLLSELEALGYAKDEMPYCLLMDGLSKAGRLDEARSVFAEMHEKRVKSDG 377 Query: 598 YSHSIMISAFCRNGLLEDAKQLARDFEATYEKYDLVLLNNLLRAYCKAGDMKSVMQMLKK 419 YSHSIMISA CR+ L E+AK+LA+DFEA Y KYDLV+LN +L AYC+AGDM+SVMQ +KK Sbjct: 378 YSHSIMISALCRSELFEEAKKLAQDFEAKYNKYDLVMLNTMLCAYCRAGDMESVMQTMKK 437 Query: 418 MDELAISPDRKTFHILANYYCKEKLYQLAYRMVEDMHSKGHLLDEILCSSLIFQLGRAGA 239 MDELAISPD TFHIL Y+CKEKLY LAY+++EDMH KG+ E LCSSLIFQLG+ A Sbjct: 438 MDELAISPDYSTFHILIKYFCKEKLYLLAYKIMEDMHGKGYHPAEELCSSLIFQLGKMKA 497 Query: 238 SSEAYSVYNMLRYSKRAVSKALHEKILNILVAGGLLKEAYVVMKDNAKFISRLSQKRFAL 59 SEA+SVYNMLRYSKR + KA HEKIL IL+AG L K+AYVV+KDN++ IS+ + K+FA Sbjct: 498 HSEAFSVYNMLRYSKRTMCKAFHEKILQILIAGKLFKDAYVVVKDNSEHISQPAIKKFAS 557 Query: 58 SFLKSGNINVINDVIKALH 2 +F+K GNIN+INDV+K +H Sbjct: 558 AFMKFGNINLINDVLKVIH 576 Score = 64.7 bits (156), Expect = 7e-08 Identities = 44/227 (19%), Positives = 107/227 (47%), Gaps = 2/227 (0%) Frame = -1 Query: 778 VRGGLFEKSRELLVKLEAMGFAEEEMPYCIIMDGLV--KAGHIDEAKVVFEEMRNKNVKS 605 V G F+ +L K++ G + + Y ++ G + K GH +++ +E++ ++ Sbjct: 177 VTNGKFDSGIKLFDKMKQEGLTPDLVTYNTLLAGCIRIKNGHYKALELI-KELKYNGLEM 235 Query: 604 DGYSHSIMISAFCRNGLLEDAKQLARDFEATYEKYDLVLLNNLLRAYCKAGDMKSVMQML 425 D + +++ +GL E+A+ + +L ++LL AY G+ + +++ Sbjct: 236 DNVMYGTLLAVCASSGLSEEAQNYFNQMKDEGLSPNLYHYSSLLNAYSYDGNYRKSDELM 295 Query: 424 KKMDELAISPDRKTFHILANYYCKEKLYQLAYRMVEDMHSKGHLLDEILCSSLIFQLGRA 245 +++ ++P++ L Y + L++ + +++ ++ + G+ DE+ L+ L +A Sbjct: 296 EELKSSGLAPNKVILTTLLKVYVRGGLFEKSRKLLSELEALGYAKDEMPYCLLMDGLSKA 355 Query: 244 GASSEAYSVYNMLRYSKRAVSKALHEKILNILVAGGLLKEAYVVMKD 104 G EA SV+ + + H +++ L L +EA + +D Sbjct: 356 GRLDEARSVFAEMHEKRVKSDGYSHSIMISALCRSELFEEAKKLAQD 402 >gb|KHG18258.1| hypothetical protein F383_23175 [Gossypium arboreum] Length = 718 Score = 364 bits (934), Expect = 4e-98 Identities = 178/259 (68%), Positives = 218/259 (84%) Frame = -1 Query: 778 VRGGLFEKSRELLVKLEAMGFAEEEMPYCIIMDGLVKAGHIDEAKVVFEEMRNKNVKSDG 599 VRGGLFEKSR+LL +LEA+G+A++EMPYC++MDGL KAG +DEA+ VF EM K VKSDG Sbjct: 318 VRGGLFEKSRKLLSELEALGYAKDEMPYCLLMDGLSKAGRLDEARSVFAEMHEKRVKSDG 377 Query: 598 YSHSIMISAFCRNGLLEDAKQLARDFEATYEKYDLVLLNNLLRAYCKAGDMKSVMQMLKK 419 YSHSIMISA CR+ L E+AK+LA+DFEA Y KYDLV+LN +L AYC+AGDM+SVMQ +KK Sbjct: 378 YSHSIMISALCRSELFEEAKKLAQDFEAKYNKYDLVMLNTMLCAYCRAGDMESVMQTMKK 437 Query: 418 MDELAISPDRKTFHILANYYCKEKLYQLAYRMVEDMHSKGHLLDEILCSSLIFQLGRAGA 239 MDELAISPD TFHIL Y+CKEKLY LAY+++EDMH KG+ E LCSSLIFQLG+ A Sbjct: 438 MDELAISPDYSTFHILIKYFCKEKLYLLAYKIMEDMHGKGYHPAEELCSSLIFQLGKMKA 497 Query: 238 SSEAYSVYNMLRYSKRAVSKALHEKILNILVAGGLLKEAYVVMKDNAKFISRLSQKRFAL 59 SEA+SVYNMLRYSKR + KA HEKIL IL+AG L K+AYVV+KDN++ IS+ + K+FA Sbjct: 498 HSEAFSVYNMLRYSKRTMCKAFHEKILQILIAGKLFKDAYVVVKDNSEHISQPAIKKFAS 557 Query: 58 SFLKSGNINVINDVIKALH 2 +F+K GNIN+INDV+K +H Sbjct: 558 AFMKFGNINLINDVLKVIH 576 Score = 64.7 bits (156), Expect = 7e-08 Identities = 44/227 (19%), Positives = 107/227 (47%), Gaps = 2/227 (0%) Frame = -1 Query: 778 VRGGLFEKSRELLVKLEAMGFAEEEMPYCIIMDGLV--KAGHIDEAKVVFEEMRNKNVKS 605 V G F+ +L K++ G + + Y ++ G + K GH +++ +E++ ++ Sbjct: 177 VTNGKFDSGIKLFDKMKQEGLTPDLVTYNTLLAGCIRIKNGHYKALELI-KELKYNGLEM 235 Query: 604 DGYSHSIMISAFCRNGLLEDAKQLARDFEATYEKYDLVLLNNLLRAYCKAGDMKSVMQML 425 D + +++ +GL E+A+ + +L ++LL AY G+ + +++ Sbjct: 236 DNVMYGTLLAVCASSGLSEEAQNYFNQMKDEGLSPNLYHYSSLLNAYSYDGNYRKSDELM 295 Query: 424 KKMDELAISPDRKTFHILANYYCKEKLYQLAYRMVEDMHSKGHLLDEILCSSLIFQLGRA 245 +++ ++P++ L Y + L++ + +++ ++ + G+ DE+ L+ L +A Sbjct: 296 EELKSSGLAPNKVILTTLLKVYVRGGLFEKSRKLLSELEALGYAKDEMPYCLLMDGLSKA 355 Query: 244 GASSEAYSVYNMLRYSKRAVSKALHEKILNILVAGGLLKEAYVVMKD 104 G EA SV+ + + H +++ L L +EA + +D Sbjct: 356 GRLDEARSVFAEMHEKRVKSDGYSHSIMISALCRSELFEEAKKLAQD 402