BLASTX nr result

ID: Cinnamomum24_contig00026003 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cinnamomum24_contig00026003
         (440 letters)

Database: ./nr 
           77,306,371 sequences; 28,104,191,420 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_010263264.1| PREDICTED: uncharacterized ATP-dependent hel...    74   4e-11
ref|XP_010263263.1| PREDICTED: uncharacterized protein LOC104601...    74   4e-11
ref|XP_006850935.1| PREDICTED: uncharacterized protein LOC184407...    60   5e-07

>ref|XP_010263264.1| PREDICTED: uncharacterized ATP-dependent helicase C29A10.10c isoform
            X2 [Nelumbo nucifera]
          Length = 1960

 Score = 73.9 bits (180), Expect = 4e-11
 Identities = 47/119 (39%), Positives = 59/119 (49%)
 Frame = -2

Query: 430  GNAFSQAGKSEDTFATRKRQRXXXXXXXXXXXXXSKKHETSSRSAPVRRQLSPTAAARDA 251
            G   S A   ++  A RKRQR             SKK ETS R APVRR LSPT A R +
Sbjct: 1842 GQVASLADAPKEMIAKRKRQRDAVDALLSSALISSKKIETSVRPAPVRRPLSPTGAVRGS 1901

Query: 250  NKPSNPSKAQPITSTRQRGATLSPHRHSRHPRNTRDHSSSGRDLDEEWKYFKDIIRESK 74
             +P  P K        Q   T+ P     + ++ R  S   +DL+EEWK FK+IIR+ K
Sbjct: 1902 IRPPKPRK----VDQSQDRETIPPCSQIHYSQDARVQSLGTKDLEEEWKAFKEIIRDRK 1956


>ref|XP_010263263.1| PREDICTED: uncharacterized protein LOC104601580 isoform X1 [Nelumbo
            nucifera]
          Length = 2390

 Score = 73.9 bits (180), Expect = 4e-11
 Identities = 47/119 (39%), Positives = 59/119 (49%)
 Frame = -2

Query: 430  GNAFSQAGKSEDTFATRKRQRXXXXXXXXXXXXXSKKHETSSRSAPVRRQLSPTAAARDA 251
            G   S A   ++  A RKRQR             SKK ETS R APVRR LSPT A R +
Sbjct: 2272 GQVASLADAPKEMIAKRKRQRDAVDALLSSALISSKKIETSVRPAPVRRPLSPTGAVRGS 2331

Query: 250  NKPSNPSKAQPITSTRQRGATLSPHRHSRHPRNTRDHSSSGRDLDEEWKYFKDIIRESK 74
             +P  P K        Q   T+ P     + ++ R  S   +DL+EEWK FK+IIR+ K
Sbjct: 2332 IRPPKPRK----VDQSQDRETIPPCSQIHYSQDARVQSLGTKDLEEEWKAFKEIIRDRK 2386


>ref|XP_006850935.1| PREDICTED: uncharacterized protein LOC18440734 [Amborella trichopoda]
            gi|548854606|gb|ERN12516.1| hypothetical protein
            AMTR_s00025p00188660 [Amborella trichopoda]
          Length = 2348

 Score = 60.5 bits (145), Expect = 5e-07
 Identities = 40/110 (36%), Positives = 54/110 (49%)
 Frame = -2

Query: 418  SQAGKSEDTFATRKRQRXXXXXXXXXXXXXSKKHETSSRSAPVRRQLSPTAAARDANKPS 239
            S    ++D+  TRKRQR             +KK ETS + A + R  S     R+  KPS
Sbjct: 2238 SNIDAAKDSIITRKRQREAVDALLSSSLISNKKPETS-KLASITRPPSSAMDGRNTIKPS 2296

Query: 238  NPSKAQPITSTRQRGATLSPHRHSRHPRNTRDHSSSGRDLDEEWKYFKDI 89
             PSK  P+   + +G T  P   + HP +    SSSG +LD EWK F D+
Sbjct: 2297 KPSKG-PLKIRQLQGTTEMPLPKAHHPEHGVKGSSSGINLDREWKSFNDL 2345


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