BLASTX nr result

ID: Cinnamomum24_contig00025823 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cinnamomum24_contig00025823
         (340 letters)

Database: ./nr 
           77,306,371 sequences; 28,104,191,420 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|YP_173440.1| hypothetical protein NitaMp102 [Nicotiana tabac...    50   2e-08

>ref|YP_173440.1| hypothetical protein NitaMp102 [Nicotiana tabacum]
           gi|56806604|dbj|BAD83505.1| hypothetical protein
           (mitochondrion) [Nicotiana tabacum]
          Length = 138

 Score = 50.1 bits (118), Expect(2) = 2e-08
 Identities = 37/71 (52%), Positives = 43/71 (60%)
 Frame = -1

Query: 250 FCNLRLLTTLFDGTPWQFAFKVHRKPLV**TFVTVSIFSR*LQ*FTELVFNSLLKLV**I 71
           FCNLRL+T LFDGT W    +VHRK +   TFVTVSI+      ++   FNS LK    I
Sbjct: 81  FCNLRLVT-LFDGTRW---LRVHRKSV---TFVTVSIW------YSLDSFNSSLKAFGVI 127

Query: 70  ASPSFRKKDII 38
               FRKKDII
Sbjct: 128 NRKPFRKKDII 138



 Score = 35.0 bits (79), Expect(2) = 2e-08
 Identities = 15/17 (88%), Positives = 16/17 (94%)
 Frame = -2

Query: 300 SALFACKAMPIQVGEGF 250
           SALFAC AMPI+VGEGF
Sbjct: 65  SALFACNAMPIKVGEGF 81


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