BLASTX nr result
ID: Cinnamomum24_contig00025305
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Cinnamomum24_contig00025305
(545 letters)
Database: ./nr
77,306,371 sequences; 28,104,191,420 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_010265021.1| PREDICTED: pentatricopeptide repeat-containi... 255 1e-65
ref|XP_007205118.1| hypothetical protein PRUPE_ppa004835mg [Prun... 255 1e-65
ref|XP_009343763.1| PREDICTED: pentatricopeptide repeat-containi... 254 2e-65
ref|XP_008218329.1| PREDICTED: pentatricopeptide repeat-containi... 254 2e-65
ref|XP_009612668.1| PREDICTED: pentatricopeptide repeat-containi... 250 3e-64
ref|XP_009612667.1| PREDICTED: pentatricopeptide repeat-containi... 250 3e-64
ref|XP_009767473.1| PREDICTED: pentatricopeptide repeat-containi... 249 4e-64
ref|XP_007030407.1| Pentatricopeptide repeat (PPR-like) superfam... 249 7e-64
ref|XP_006361415.1| PREDICTED: pentatricopeptide repeat-containi... 248 1e-63
ref|XP_011076945.1| PREDICTED: pentatricopeptide repeat-containi... 246 5e-63
emb|CDO99996.1| unnamed protein product [Coffea canephora] 246 6e-63
ref|XP_008370748.1| PREDICTED: pentatricopeptide repeat-containi... 245 1e-62
ref|XP_012492771.1| PREDICTED: pentatricopeptide repeat-containi... 243 3e-62
ref|XP_010102224.1| hypothetical protein L484_024505 [Morus nota... 243 5e-62
ref|XP_010523366.1| PREDICTED: pentatricopeptide repeat-containi... 243 5e-62
ref|XP_002884468.1| pentatricopeptide repeat-containing protein ... 242 7e-62
gb|KFK37890.1| hypothetical protein AALP_AA3G042500 [Arabis alpina] 242 9e-62
ref|XP_010485860.1| PREDICTED: pentatricopeptide repeat-containi... 241 2e-61
ref|XP_010463963.1| PREDICTED: pentatricopeptide repeat-containi... 241 2e-61
ref|XP_006296608.1| hypothetical protein CARUB_v10013258mg [Caps... 241 2e-61
>ref|XP_010265021.1| PREDICTED: pentatricopeptide repeat-containing protein At3g04760,
chloroplastic [Nelumbo nucifera]
Length = 582
Score = 255 bits (651), Expect = 1e-65
Identities = 122/180 (67%), Positives = 144/180 (80%)
Frame = -3
Query: 543 GKLGSALKALDQLLEDNCTPTVVTYTILIEATITERGTQSAMKLLDEMSSKGLRPDMYTY 364
GKL ALK DQLL+D+C PTV+TYTILIEATI E GT AMKLL+EM SKGLRPDMYTY
Sbjct: 186 GKLRLALKVFDQLLKDSCHPTVITYTILIEATIVEGGTNDAMKLLEEMLSKGLRPDMYTY 245
Query: 363 NVIIRGMCKEGMVDEAYAFVRSLPSRGCNPDVISYNIXXXXXXXXXRWKEGEGLISEMIS 184
N IIRGMC+EGMVD A+ F+RSLPS+GC PDV+SYNI RW +GE L++ MIS
Sbjct: 246 NAIIRGMCREGMVDRAFEFIRSLPSQGCEPDVVSYNILLRAFLTQGRWDDGEKLVAGMIS 305
Query: 183 NGCGPNVVTYSILINSLCQDGKVDMAVDVLKDMMKSGLVPDTYSYDPVISAFCKEGRLEV 4
GC PN++TYSILI SLC +GKV+ A++VLK M+ G PDTYSYDP+ISAFCKEGRL++
Sbjct: 306 RGCEPNLITYSILITSLCHEGKVEQALEVLKVMLTRGFTPDTYSYDPLISAFCKEGRLDL 365
Score = 117 bits (292), Expect = 4e-24
Identities = 66/181 (36%), Positives = 94/181 (51%)
Frame = -3
Query: 543 GKLGSALKALDQLLEDNCTPTVVTYTILIEATITERGTQSAMKLLDEMSSKGLRPDMYTY 364
GK+ AL+ L +L TP +Y LI A E ++LL+ M S G PD+ Y
Sbjct: 326 GKVEQALEVLKVMLTRGFTPDTYSYDPLISAFCKEGRLDLTLELLECMISNGCAPDIVNY 385
Query: 363 NVIIRGMCKEGMVDEAYAFVRSLPSRGCNPDVISYNIXXXXXXXXXRWKEGEGLISEMIS 184
N I+ +CK G D+A L GC P+V SYN + ++SEMIS
Sbjct: 386 NTIMAALCKSGNADQALEIFEELGRAGCPPNVSSYNTMISGLWNNGARLKALEMVSEMIS 445
Query: 183 NGCGPNVVTYSILINSLCQDGKVDMAVDVLKDMMKSGLVPDTYSYDPVISAFCKEGRLEV 4
G P+ +TY+ LI+ LC++G VD A+ +L+DM SG P SY+ V+ CK R++
Sbjct: 446 KGMEPDEITYNSLISCLCREGMVDEAMGLLEDMEGSGFRPTVISYNTVLLGLCKAHRIDN 505
Query: 3 A 1
A
Sbjct: 506 A 506
Score = 101 bits (252), Expect = 2e-19
Identities = 52/166 (31%), Positives = 82/166 (49%)
Frame = -3
Query: 510 QLLEDNCTPTVVTYTILIEATITERGTQSAMKLLDEMSSKGLRPDMYTYNVIIRGMCKEG 331
++LE + P Y LI SA K+LD M +G PD+ TYN++I +C G
Sbjct: 127 EILESHGEPDAFAYNALISGFCKMNRIDSATKVLDRMKIRGCLPDVVTYNILIGSLCGRG 186
Query: 330 MVDEAYAFVRSLPSRGCNPDVISYNIXXXXXXXXXRWKEGEGLISEMISNGCGPNVVTYS 151
+ A L C+P VI+Y I + L+ EM+S G P++ TY+
Sbjct: 187 KLRLALKVFDQLLKDSCHPTVITYTILIEATIVEGGTNDAMKLLEEMLSKGLRPDMYTYN 246
Query: 150 ILINSLCQDGKVDMAVDVLKDMMKSGLVPDTYSYDPVISAFCKEGR 13
+I +C++G VD A + ++ + G PD SY+ ++ AF +GR
Sbjct: 247 AIIRGMCREGMVDRAFEFIRSLPSQGCEPDVVSYNILLRAFLTQGR 292
Score = 90.9 bits (224), Expect = 3e-16
Identities = 45/161 (27%), Positives = 83/161 (51%)
Frame = -3
Query: 543 GKLGSALKALDQLLEDNCTPTVVTYTILIEATITERGTQSAMKLLDEMSSKGLRPDMYTY 364
G+L L+ L+ ++ + C P +V Y ++ A A+++ +E+ G P++ +Y
Sbjct: 361 GRLDLTLELLECMISNGCAPDIVNYNTIMAALCKSGNADQALEIFEELGRAGCPPNVSSY 420
Query: 363 NVIIRGMCKEGMVDEAYAFVRSLPSRGCNPDVISYNIXXXXXXXXXRWKEGEGLISEMIS 184
N +I G+ G +A V + S+G PD I+YN E GL+ +M
Sbjct: 421 NTMISGLWNNGARLKALEMVSEMISKGMEPDEITYNSLISCLCREGMVDEAMGLLEDMEG 480
Query: 183 NGCGPNVVTYSILINSLCQDGKVDMAVDVLKDMMKSGLVPD 61
+G P V++Y+ ++ LC+ ++D A+D+L M+K G P+
Sbjct: 481 SGFRPTVISYNTVLLGLCKAHRIDNAIDLLVVMVKKGCRPN 521
Score = 86.3 bits (212), Expect = 8e-15
Identities = 47/141 (33%), Positives = 66/141 (46%)
Frame = -3
Query: 543 GKLGSALKALDQLLEDNCTPTVVTYTILIEATITERGTQSAMKLLDEMSSKGLRPDMYTY 364
G AL+ ++L C P V +Y +I A++++ EM SKG+ PD TY
Sbjct: 396 GNADQALEIFEELGRAGCPPNVSSYNTMISGLWNNGARLKALEMVSEMISKGMEPDEITY 455
Query: 363 NVIIRGMCKEGMVDEAYAFVRSLPSRGCNPDVISYNIXXXXXXXXXRWKEGEGLISEMIS 184
N +I +C+EGMVDEA + + G P VISYN R L+ M+
Sbjct: 456 NSLISCLCREGMVDEAMGLLEDMEGSGFRPTVISYNTVLLGLCKAHRIDNAIDLLVVMVK 515
Query: 183 NGCGPNVVTYSILINSLCQDG 121
GC PN T +LI + G
Sbjct: 516 KGCRPNETTCILLIEGIAYAG 536
Score = 84.7 bits (208), Expect = 2e-14
Identities = 46/175 (26%), Positives = 82/175 (46%), Gaps = 34/175 (19%)
Frame = -3
Query: 423 AMKLLDEMSSKGLRPDM----------------------------------YTYNVIIRG 346
++ L+ M +KG +PD+ + YN +I G
Sbjct: 87 SLYFLECMINKGYKPDVILCTKLIKGFFNSRKGEKAVRVMEILESHGEPDAFAYNALISG 146
Query: 345 MCKEGMVDEAYAFVRSLPSRGCNPDVISYNIXXXXXXXXXRWKEGEGLISEMISNGCGPN 166
CK +D A + + RGC PDV++YNI + + + +++ + C P
Sbjct: 147 FCKMNRIDSATKVLDRMKIRGCLPDVVTYNILIGSLCGRGKLRLALKVFDQLLKDSCHPT 206
Query: 165 VVTYSILINSLCQDGKVDMAVDVLKDMMKSGLVPDTYSYDPVISAFCKEGRLEVA 1
V+TY+ILI + +G + A+ +L++M+ GL PD Y+Y+ +I C+EG ++ A
Sbjct: 207 VITYTILIEATIVEGGTNDAMKLLEEMLSKGLRPDMYTYNAIIRGMCREGMVDRA 261
Score = 56.2 bits (134), Expect = 9e-06
Identities = 32/121 (26%), Positives = 60/121 (49%), Gaps = 2/121 (1%)
Frame = -3
Query: 357 IIRGMCKEGMVDEAYAFVRSLPSRGCNPDVISYNIXXXXXXXXXRWKEGEGLIS--EMIS 184
++ CK G +E+ F+ + ++G PDVI + ++GE + E++
Sbjct: 74 LLNRSCKAGKYNESLYFLECMINKGYKPDVI---LCTKLIKGFFNSRKGEKAVRVMEILE 130
Query: 183 NGCGPNVVTYSILINSLCQDGKVDMAVDVLKDMMKSGLVPDTYSYDPVISAFCKEGRLEV 4
+ P+ Y+ LI+ C+ ++D A VL M G +PD +Y+ +I + C G+L +
Sbjct: 131 SHGEPDAFAYNALISGFCKMNRIDSATKVLDRMKIRGCLPDVVTYNILIGSLCGRGKLRL 190
Query: 3 A 1
A
Sbjct: 191 A 191
>ref|XP_007205118.1| hypothetical protein PRUPE_ppa004835mg [Prunus persica]
gi|462400760|gb|EMJ06317.1| hypothetical protein
PRUPE_ppa004835mg [Prunus persica]
Length = 489
Score = 255 bits (651), Expect = 1e-65
Identities = 121/181 (66%), Positives = 147/181 (81%)
Frame = -3
Query: 543 GKLGSALKALDQLLEDNCTPTVVTYTILIEATITERGTQSAMKLLDEMSSKGLRPDMYTY 364
GKLG ALK +DQL++DNC PTV+TYTILIEATI + G AMKLLDEM S+GL+PDMYTY
Sbjct: 93 GKLGLALKVMDQLVKDNCRPTVITYTILIEATIVDGGIDEAMKLLDEMLSRGLKPDMYTY 152
Query: 363 NVIIRGMCKEGMVDEAYAFVRSLPSRGCNPDVISYNIXXXXXXXXXRWKEGEGLISEMIS 184
N +IRGMC+EGM+D A+ FVRSL S+GC P+VISYNI +W+EGE L++ M S
Sbjct: 153 NAVIRGMCREGMLDRAFQFVRSLDSKGCPPNVISYNILLRALLNRGKWEEGEKLVTNMCS 212
Query: 183 NGCGPNVVTYSILINSLCQDGKVDMAVDVLKDMMKSGLVPDTYSYDPVISAFCKEGRLEV 4
GC PNVVTYSILI++LC+DGKV+ AV+VLK M K GL PD YSYDP++SAFCKEGRL++
Sbjct: 213 RGCEPNVVTYSILISTLCRDGKVEDAVNVLKIMKKKGLTPDAYSYDPLVSAFCKEGRLDL 272
Query: 3 A 1
A
Sbjct: 273 A 273
Score = 114 bits (285), Expect = 3e-23
Identities = 61/178 (34%), Positives = 89/178 (50%)
Frame = -3
Query: 543 GKLGSALKALDQLLEDNCTPTVVTYTILIEATITERGTQSAMKLLDEMSSKGLRPDMYTY 364
GK+ A+ L + + TP +Y L+ A E A++ LD M S G PD+ Y
Sbjct: 233 GKVEDAVNVLKIMKKKGLTPDAYSYDPLVSAFCKEGRLDLAIEFLDYMISDGCLPDIVNY 292
Query: 363 NVIIRGMCKEGMVDEAYAFVRSLPSRGCNPDVISYNIXXXXXXXXXRWKEGEGLISEMIS 184
N I+ +CK G D+A +L GC P+V SYN G++SEM+
Sbjct: 293 NTILAALCKSGKADQALQIFENLGEVGCPPNVSSYNTMFSALWNCGDRVRALGMVSEMVG 352
Query: 183 NGCGPNVVTYSILINSLCQDGKVDMAVDVLKDMMKSGLVPDTYSYDPVISAFCKEGRL 10
G P+ +TY+ LI+ LC+DG VD A+ +L DM G P SY+ ++ CK R+
Sbjct: 353 KGIKPDEITYNSLISCLCRDGMVDEAIGLLVDMETGGFQPTVISYNIILLGLCKTRRV 410
Score = 108 bits (271), Expect = 1e-21
Identities = 55/181 (30%), Positives = 94/181 (51%)
Frame = -3
Query: 543 GKLGSALKALDQLLEDNCTPTVVTYTILIEATITERGTQSAMKLLDEMSSKGLRPDMYTY 364
GK K + + C P VVTY+ILI + + A+ +L M KGL PD Y+Y
Sbjct: 198 GKWEEGEKLVTNMCSRGCEPNVVTYSILISTLCRDGKVEDAVNVLKIMKKKGLTPDAYSY 257
Query: 363 NVIIRGMCKEGMVDEAYAFVRSLPSRGCNPDVISYNIXXXXXXXXXRWKEGEGLISEMIS 184
+ ++ CKEG +D A F+ + S GC PD+++YN + + + +
Sbjct: 258 DPLVSAFCKEGRLDLAIEFLDYMISDGCLPDIVNYNTILAALCKSGKADQALQIFENLGE 317
Query: 183 NGCGPNVVTYSILINSLCQDGKVDMAVDVLKDMMKSGLVPDTYSYDPVISAFCKEGRLEV 4
GC PNV +Y+ + ++L G A+ ++ +M+ G+ PD +Y+ +IS C++G ++
Sbjct: 318 VGCPPNVSSYNTMFSALWNCGDRVRALGMVSEMVGKGIKPDEITYNSLISCLCRDGMVDE 377
Query: 3 A 1
A
Sbjct: 378 A 378
Score = 89.4 bits (220), Expect = 1e-15
Identities = 48/137 (35%), Positives = 71/137 (51%)
Frame = -3
Query: 543 GKLGSALKALDQLLEDNCTPTVVTYTILIEATITERGTQSAMKLLDEMSSKGLRPDMYTY 364
GK AL+ + L E C P V +Y + A A+ ++ EM KG++PD TY
Sbjct: 303 GKADQALQIFENLGEVGCPPNVSSYNTMFSALWNCGDRVRALGMVSEMVGKGIKPDEITY 362
Query: 363 NVIIRGMCKEGMVDEAYAFVRSLPSRGCNPDVISYNIXXXXXXXXXRWKEGEGLISEMIS 184
N +I +C++GMVDEA + + + G P VISYNI R + +++EM+
Sbjct: 363 NSLISCLCRDGMVDEAIGLLVDMETGGFQPTVISYNIILLGLCKTRRVVDAIQVLTEMVE 422
Query: 183 NGCGPNVVTYSILINSL 133
GC PN TY +LI +
Sbjct: 423 KGCRPNETTYILLIEGI 439
Score = 85.5 bits (210), Expect = 1e-14
Identities = 44/165 (26%), Positives = 81/165 (49%)
Frame = -3
Query: 543 GKLGSALKALDQLLEDNCTPTVVTYTILIEATITERGTQSAMKLLDEMSSKGLRPDMYTY 364
G+L A++ LD ++ D C P +V Y ++ A A+++ + + G P++ +Y
Sbjct: 268 GRLDLAIEFLDYMISDGCLPDIVNYNTILAALCKSGKADQALQIFENLGEVGCPPNVSSY 327
Query: 363 NVIIRGMCKEGMVDEAYAFVRSLPSRGCNPDVISYNIXXXXXXXXXRWKEGEGLISEMIS 184
N + + G A V + +G PD I+YN E GL+ +M +
Sbjct: 328 NTMFSALWNCGDRVRALGMVSEMVGKGIKPDEITYNSLISCLCRDGMVDEAIGLLVDMET 387
Query: 183 NGCGPNVVTYSILINSLCQDGKVDMAVDVLKDMMKSGLVPDTYSY 49
G P V++Y+I++ LC+ +V A+ VL +M++ G P+ +Y
Sbjct: 388 GGFQPTVISYNIILLGLCKTRRVVDAIQVLTEMVEKGCRPNETTY 432
Score = 72.4 bits (176), Expect = 1e-10
Identities = 48/169 (28%), Positives = 74/169 (43%), Gaps = 35/169 (20%)
Frame = -3
Query: 402 MSSKGLRPDMYTYNVIIRGMCKEGMVDEAYAFVRSLPSRGCNPDVISYNIXXXXXXXXXR 223
M +KG +PD+ +I+G +++A ++ L G PD+ SYN R
Sbjct: 1 MVNKGYKPDVILCTKLIKGFFNSRNIEKAIRVMQILEKYG-EPDLFSYNALISGFCKANR 59
Query: 222 WKEGEGLISEMISNGCGPNVVTYSILINSLCQ---------------------------- 127
+ ++ M S G P+VVTY+I+I SLC
Sbjct: 60 IESANKVLDRMRSQGFSPDVVTYNIMIGSLCSRGKLGLALKVMDQLVKDNCRPTVITYTI 119
Query: 126 -------DGKVDMAVDVLKDMMKSGLVPDTYSYDPVISAFCKEGRLEVA 1
DG +D A+ +L +M+ GL PD Y+Y+ VI C+EG L+ A
Sbjct: 120 LIEATIVDGGIDEAMKLLDEMLSRGLKPDMYTYNAVIRGMCREGMLDRA 168
>ref|XP_009343763.1| PREDICTED: pentatricopeptide repeat-containing protein At3g04760,
chloroplastic-like [Pyrus x bretschneideri]
Length = 633
Score = 254 bits (648), Expect = 2e-65
Identities = 120/181 (66%), Positives = 147/181 (81%)
Frame = -3
Query: 543 GKLGSALKALDQLLEDNCTPTVVTYTILIEATITERGTQSAMKLLDEMSSKGLRPDMYTY 364
GKLG ALK LDQL++DNC PTV+TYTILIEATI E G AMKLLDEM S+GL+PDM+TY
Sbjct: 237 GKLGLALKVLDQLVKDNCRPTVITYTILIEATIPEGGIDEAMKLLDEMLSRGLKPDMHTY 296
Query: 363 NVIIRGMCKEGMVDEAYAFVRSLPSRGCNPDVISYNIXXXXXXXXXRWKEGEGLISEMIS 184
N ++RGMC+EGM+D A+ FVRSL S+GC+P+V+SYNI +W+EGE L+S M S
Sbjct: 297 NAVVRGMCREGMLDRAFEFVRSLDSKGCSPNVVSYNILLRALLNRGKWEEGEKLVSNMCS 356
Query: 183 NGCGPNVVTYSILINSLCQDGKVDMAVDVLKDMMKSGLVPDTYSYDPVISAFCKEGRLEV 4
GC PNVVTYSILI++LC+DGKV+ AV+VLK M GL PD YSYDP++SAFCKEGRL++
Sbjct: 357 RGCEPNVVTYSILISTLCRDGKVEDAVNVLKIMKDKGLTPDAYSYDPLVSAFCKEGRLDL 416
Query: 3 A 1
A
Sbjct: 417 A 417
Score = 110 bits (276), Expect = 3e-22
Identities = 60/178 (33%), Positives = 89/178 (50%)
Frame = -3
Query: 543 GKLGSALKALDQLLEDNCTPTVVTYTILIEATITERGTQSAMKLLDEMSSKGLRPDMYTY 364
GK+ A+ L + + TP +Y L+ A E A++ LD M S G PD+ Y
Sbjct: 377 GKVEDAVNVLKIMKDKGLTPDAYSYDPLVSAFCKEGRLDLAIEFLDYMISDGCLPDIVNY 436
Query: 363 NVIIRGMCKEGMVDEAYAFVRSLPSRGCNPDVISYNIXXXXXXXXXRWKEGEGLISEMIS 184
N I+ +CK G D+A +L GC P+V SYN ++SEM+S
Sbjct: 437 NTILAALCKSGKADQALQIFENLGEVGCPPNVSSYNTMFSALWNCGDRVRALQMVSEMVS 496
Query: 183 NGCGPNVVTYSILINSLCQDGKVDMAVDVLKDMMKSGLVPDTYSYDPVISAFCKEGRL 10
G P+ +TY+ LI+ LC+DG ++ A+ +L DM G P SY+ V+ CK R+
Sbjct: 497 KGIDPDGITYNSLISCLCRDGMMNEAIGLLVDMETGGFQPTVISYNIVLLGLCKTRRI 554
Score = 109 bits (272), Expect = 9e-22
Identities = 55/181 (30%), Positives = 93/181 (51%)
Frame = -3
Query: 543 GKLGSALKALDQLLEDNCTPTVVTYTILIEATITERGTQSAMKLLDEMSSKGLRPDMYTY 364
GK K + + C P VVTY+ILI + + A+ +L M KGL PD Y+Y
Sbjct: 342 GKWEEGEKLVSNMCSRGCEPNVVTYSILISTLCRDGKVEDAVNVLKIMKDKGLTPDAYSY 401
Query: 363 NVIIRGMCKEGMVDEAYAFVRSLPSRGCNPDVISYNIXXXXXXXXXRWKEGEGLISEMIS 184
+ ++ CKEG +D A F+ + S GC PD+++YN + + + +
Sbjct: 402 DPLVSAFCKEGRLDLAIEFLDYMISDGCLPDIVNYNTILAALCKSGKADQALQIFENLGE 461
Query: 183 NGCGPNVVTYSILINSLCQDGKVDMAVDVLKDMMKSGLVPDTYSYDPVISAFCKEGRLEV 4
GC PNV +Y+ + ++L G A+ ++ +M+ G+ PD +Y+ +IS C++G +
Sbjct: 462 VGCPPNVSSYNTMFSALWNCGDRVRALQMVSEMVSKGIDPDGITYNSLISCLCRDGMMNE 521
Query: 3 A 1
A
Sbjct: 522 A 522
Score = 86.7 bits (213), Expect = 6e-15
Identities = 45/169 (26%), Positives = 85/169 (50%)
Frame = -3
Query: 543 GKLGSALKALDQLLEDNCTPTVVTYTILIEATITERGTQSAMKLLDEMSSKGLRPDMYTY 364
G+L A++ LD ++ D C P +V Y ++ A A+++ + + G P++ +Y
Sbjct: 412 GRLDLAIEFLDYMISDGCLPDIVNYNTILAALCKSGKADQALQIFENLGEVGCPPNVSSY 471
Query: 363 NVIIRGMCKEGMVDEAYAFVRSLPSRGCNPDVISYNIXXXXXXXXXRWKEGEGLISEMIS 184
N + + G A V + S+G +PD I+YN E GL+ +M +
Sbjct: 472 NTMFSALWNCGDRVRALQMVSEMVSKGIDPDGITYNSLISCLCRDGMMNEAIGLLVDMET 531
Query: 183 NGCGPNVVTYSILINSLCQDGKVDMAVDVLKDMMKSGLVPDTYSYDPVI 37
G P V++Y+I++ LC+ ++ A++VL M++ G P+ +Y +I
Sbjct: 532 GGFQPTVISYNIVLLGLCKTRRIVDAIEVLAAMVEKGCRPNETTYTLLI 580
Score = 85.9 bits (211), Expect = 1e-14
Identities = 46/137 (33%), Positives = 72/137 (52%)
Frame = -3
Query: 543 GKLGSALKALDQLLEDNCTPTVVTYTILIEATITERGTQSAMKLLDEMSSKGLRPDMYTY 364
GK AL+ + L E C P V +Y + A A++++ EM SKG+ PD TY
Sbjct: 447 GKADQALQIFENLGEVGCPPNVSSYNTMFSALWNCGDRVRALQMVSEMVSKGIDPDGITY 506
Query: 363 NVIIRGMCKEGMVDEAYAFVRSLPSRGCNPDVISYNIXXXXXXXXXRWKEGEGLISEMIS 184
N +I +C++GM++EA + + + G P VISYNI R + +++ M+
Sbjct: 507 NSLISCLCRDGMMNEAIGLLVDMETGGFQPTVISYNIVLLGLCKTRRIVDAIEVLAAMVE 566
Query: 183 NGCGPNVVTYSILINSL 133
GC PN TY++LI +
Sbjct: 567 KGCRPNETTYTLLIEGI 583
Score = 84.3 bits (207), Expect = 3e-14
Identities = 46/175 (26%), Positives = 83/175 (47%), Gaps = 34/175 (19%)
Frame = -3
Query: 423 AMKLLDEMSSKGLR----------------------------------PDMYTYNVIIRG 346
A+ L+ M +K + PD+++YN +I G
Sbjct: 138 ALYFLELMVNKAYKPDVILCTKLIKGFFNSRNVEKAVRVMQILEKYGEPDLFSYNALISG 197
Query: 345 MCKEGMVDEAYAFVRSLPSRGCNPDVISYNIXXXXXXXXXRWKEGEGLISEMISNGCGPN 166
CK +D A + + S+G +PDV++YNI + ++ +++ + C P
Sbjct: 198 FCKANRIDAANKVLDRMRSQGFSPDVVTYNIMIGSLCGRGKLGLALKVLDQLVKDNCRPT 257
Query: 165 VVTYSILINSLCQDGKVDMAVDVLKDMMKSGLVPDTYSYDPVISAFCKEGRLEVA 1
V+TY+ILI + +G +D A+ +L +M+ GL PD ++Y+ V+ C+EG L+ A
Sbjct: 258 VITYTILIEATIPEGGIDEAMKLLDEMLSRGLKPDMHTYNAVVRGMCREGMLDRA 312
>ref|XP_008218329.1| PREDICTED: pentatricopeptide repeat-containing protein At3g04760,
chloroplastic [Prunus mume]
Length = 592
Score = 254 bits (648), Expect = 2e-65
Identities = 120/181 (66%), Positives = 147/181 (81%)
Frame = -3
Query: 543 GKLGSALKALDQLLEDNCTPTVVTYTILIEATITERGTQSAMKLLDEMSSKGLRPDMYTY 364
GKLG ALK +DQL++DNC PTV+TYTILIEATI + G AMKLLDEM S+GL+PDMYTY
Sbjct: 196 GKLGLALKVMDQLVKDNCRPTVITYTILIEATIVDGGIDEAMKLLDEMLSRGLKPDMYTY 255
Query: 363 NVIIRGMCKEGMVDEAYAFVRSLPSRGCNPDVISYNIXXXXXXXXXRWKEGEGLISEMIS 184
N +IRGMC++GM+D A+ FVRSL S+GC P+VISYNI +W+EGE L++ M S
Sbjct: 256 NAVIRGMCRDGMLDRAFQFVRSLDSKGCPPNVISYNILLRALLNRGKWEEGEKLVTNMCS 315
Query: 183 NGCGPNVVTYSILINSLCQDGKVDMAVDVLKDMMKSGLVPDTYSYDPVISAFCKEGRLEV 4
GC PNVVTYSILI++LC+DGKV+ AV+VLK M K GL PD YSYDP++SAFCKEGRL++
Sbjct: 316 RGCEPNVVTYSILISTLCRDGKVEDAVNVLKIMKKKGLTPDAYSYDPLVSAFCKEGRLDL 375
Query: 3 A 1
A
Sbjct: 376 A 376
Score = 114 bits (284), Expect = 4e-23
Identities = 62/178 (34%), Positives = 89/178 (50%)
Frame = -3
Query: 543 GKLGSALKALDQLLEDNCTPTVVTYTILIEATITERGTQSAMKLLDEMSSKGLRPDMYTY 364
GK+ A+ L + + TP +Y L+ A E A++ LD M S G PD+ Y
Sbjct: 336 GKVEDAVNVLKIMKKKGLTPDAYSYDPLVSAFCKEGRLDLAIEFLDYMISDGCLPDIVNY 395
Query: 363 NVIIRGMCKEGMVDEAYAFVRSLPSRGCNPDVISYNIXXXXXXXXXRWKEGEGLISEMIS 184
N I+ +CK G D+A +L GC P+V SYN G++SEMI
Sbjct: 396 NTILAALCKSGKADQALQIFENLGEVGCPPNVSSYNTMFSALWNCGDRVRALGMVSEMIG 455
Query: 183 NGCGPNVVTYSILINSLCQDGKVDMAVDVLKDMMKSGLVPDTYSYDPVISAFCKEGRL 10
G P+ +TY+ LI+ LC+DG VD A+ +L DM G P SY+ ++ CK R+
Sbjct: 456 KGIKPDEITYNSLISCLCRDGMVDEAIGLLVDMETGGFQPTVISYNILLLGLCKTRRV 513
Score = 108 bits (271), Expect = 1e-21
Identities = 55/181 (30%), Positives = 94/181 (51%)
Frame = -3
Query: 543 GKLGSALKALDQLLEDNCTPTVVTYTILIEATITERGTQSAMKLLDEMSSKGLRPDMYTY 364
GK K + + C P VVTY+ILI + + A+ +L M KGL PD Y+Y
Sbjct: 301 GKWEEGEKLVTNMCSRGCEPNVVTYSILISTLCRDGKVEDAVNVLKIMKKKGLTPDAYSY 360
Query: 363 NVIIRGMCKEGMVDEAYAFVRSLPSRGCNPDVISYNIXXXXXXXXXRWKEGEGLISEMIS 184
+ ++ CKEG +D A F+ + S GC PD+++YN + + + +
Sbjct: 361 DPLVSAFCKEGRLDLAIEFLDYMISDGCLPDIVNYNTILAALCKSGKADQALQIFENLGE 420
Query: 183 NGCGPNVVTYSILINSLCQDGKVDMAVDVLKDMMKSGLVPDTYSYDPVISAFCKEGRLEV 4
GC PNV +Y+ + ++L G A+ ++ +M+ G+ PD +Y+ +IS C++G ++
Sbjct: 421 VGCPPNVSSYNTMFSALWNCGDRVRALGMVSEMIGKGIKPDEITYNSLISCLCRDGMVDE 480
Query: 3 A 1
A
Sbjct: 481 A 481
Score = 89.4 bits (220), Expect = 1e-15
Identities = 48/137 (35%), Positives = 71/137 (51%)
Frame = -3
Query: 543 GKLGSALKALDQLLEDNCTPTVVTYTILIEATITERGTQSAMKLLDEMSSKGLRPDMYTY 364
GK AL+ + L E C P V +Y + A A+ ++ EM KG++PD TY
Sbjct: 406 GKADQALQIFENLGEVGCPPNVSSYNTMFSALWNCGDRVRALGMVSEMIGKGIKPDEITY 465
Query: 363 NVIIRGMCKEGMVDEAYAFVRSLPSRGCNPDVISYNIXXXXXXXXXRWKEGEGLISEMIS 184
N +I +C++GMVDEA + + + G P VISYNI R + +++EM+
Sbjct: 466 NSLISCLCRDGMVDEAIGLLVDMETGGFQPTVISYNILLLGLCKTRRVVDAIQVLTEMVE 525
Query: 183 NGCGPNVVTYSILINSL 133
GC PN TY +LI +
Sbjct: 526 KGCRPNETTYILLIEGI 542
Score = 85.9 bits (211), Expect = 1e-14
Identities = 45/165 (27%), Positives = 81/165 (49%)
Frame = -3
Query: 543 GKLGSALKALDQLLEDNCTPTVVTYTILIEATITERGTQSAMKLLDEMSSKGLRPDMYTY 364
G+L A++ LD ++ D C P +V Y ++ A A+++ + + G P++ +Y
Sbjct: 371 GRLDLAIEFLDYMISDGCLPDIVNYNTILAALCKSGKADQALQIFENLGEVGCPPNVSSY 430
Query: 363 NVIIRGMCKEGMVDEAYAFVRSLPSRGCNPDVISYNIXXXXXXXXXRWKEGEGLISEMIS 184
N + + G A V + +G PD I+YN E GL+ +M +
Sbjct: 431 NTMFSALWNCGDRVRALGMVSEMIGKGIKPDEITYNSLISCLCRDGMVDEAIGLLVDMET 490
Query: 183 NGCGPNVVTYSILINSLCQDGKVDMAVDVLKDMMKSGLVPDTYSY 49
G P V++Y+IL+ LC+ +V A+ VL +M++ G P+ +Y
Sbjct: 491 GGFQPTVISYNILLLGLCKTRRVVDAIQVLTEMVEKGCRPNETTY 535
Score = 72.4 bits (176), Expect = 1e-10
Identities = 48/176 (27%), Positives = 78/176 (44%), Gaps = 35/176 (19%)
Frame = -3
Query: 423 AMKLLDEMSSKGLRPDMYTYNVIIRGMCKEGMVDEAYAFVRSLPSRGCNPDVISYNIXXX 244
++ L+ M +KG +PD+ +I+G +++A ++ L G PD+ SYN
Sbjct: 97 SLYFLELMVNKGYKPDVILCTKLIKGFFNSRNIEKAIRVMQILEKYG-EPDLFSYNALIS 155
Query: 243 XXXXXXRWKEGEGLISEMISNGCGPNVVTYSILINSLCQ--------------------- 127
R + ++ M S G P+VVTY+I+I SLC
Sbjct: 156 GFCKANRIESANKVLDRMRSQGFSPDVVTYNIMIGSLCTRGKLGLALKVMDQLVKDNCRP 215
Query: 126 --------------DGKVDMAVDVLKDMMKSGLVPDTYSYDPVISAFCKEGRLEVA 1
DG +D A+ +L +M+ GL PD Y+Y+ VI C++G L+ A
Sbjct: 216 TVITYTILIEATIVDGGIDEAMKLLDEMLSRGLKPDMYTYNAVIRGMCRDGMLDRA 271
>ref|XP_009612668.1| PREDICTED: pentatricopeptide repeat-containing protein At3g04760,
chloroplastic isoform X2 [Nicotiana tomentosiformis]
Length = 458
Score = 250 bits (638), Expect = 3e-64
Identities = 123/182 (67%), Positives = 145/182 (79%), Gaps = 1/182 (0%)
Frame = -3
Query: 543 GKLGSALKALDQLLED-NCTPTVVTYTILIEATITERGTQSAMKLLDEMSSKGLRPDMYT 367
GKLG ALK LDQL E+ NC PTV+TYTILIEATI E G AMKLLDEM S GL+PDMYT
Sbjct: 61 GKLGLALKLLDQLKEEKNCKPTVITYTILIEATILEGGIHEAMKLLDEMLSTGLQPDMYT 120
Query: 366 YNVIIRGMCKEGMVDEAYAFVRSLPSRGCNPDVISYNIXXXXXXXXXRWKEGEGLISEMI 187
YN IIRGMC+E M D+AY FVRSLPS+GC PDVISYNI +W +GE L++EM
Sbjct: 121 YNAIIRGMCREKMTDQAYEFVRSLPSKGCKPDVISYNILLRALLHKGKWSDGEKLVNEMF 180
Query: 186 SNGCGPNVVTYSILINSLCQDGKVDMAVDVLKDMMKSGLVPDTYSYDPVISAFCKEGRLE 7
S GC PNVVTYSIL++SLC+DGK+D A+++LK MM GL PDT++YDP+ISAFCK GRL+
Sbjct: 181 SAGCEPNVVTYSILMSSLCRDGKLDEAINLLKIMMDKGLTPDTFTYDPLISAFCKGGRLD 240
Query: 6 VA 1
+A
Sbjct: 241 LA 242
Score = 118 bits (296), Expect = 1e-24
Identities = 69/186 (37%), Positives = 94/186 (50%), Gaps = 5/186 (2%)
Frame = -3
Query: 543 GKLGSALKALDQLLEDNCTPTVVTYTILIEATITERGTQSAMKLLDEMSSKGLRPDMYTY 364
GKL A+ L +++ TP TY LI A A+K LD M S G PD+ Y
Sbjct: 202 GKLDEAINLLKIMMDKGLTPDTFTYDPLISAFCKGGRLDLAIKFLDYMISNGCLPDIVNY 261
Query: 363 NVIIRGMCKEGMVDEAYAFVRSLPSRGCNPDVISYNIXXXXXXXXXRWKEGEG-----LI 199
N I+ MCK+G DEA L GC PDV +YN W GE L+
Sbjct: 262 NTILSTMCKKGKADEAMEVFEKLAEIGCPPDVSTYNTMMSAL-----WNNGERARALILV 316
Query: 198 SEMISNGCGPNVVTYSILINSLCQDGKVDMAVDVLKDMMKSGLVPDTYSYDPVISAFCKE 19
EMI G P+ +TY+ LI+ LC+DG V+ A+D+L DM +G P +Y+ ++ CK
Sbjct: 317 PEMIEKGIDPDEITYNSLISCLCRDGLVNEALDLLVDMEGNGFPPTVITYNILLLGLCKA 376
Query: 18 GRLEVA 1
R++ A
Sbjct: 377 HRIDEA 382
Score = 112 bits (281), Expect = 8e-23
Identities = 56/181 (30%), Positives = 99/181 (54%)
Frame = -3
Query: 543 GKLGSALKALDQLLEDNCTPTVVTYTILIEATITERGTQSAMKLLDEMSSKGLRPDMYTY 364
GK K ++++ C P VVTY+IL+ + + A+ LL M KGL PD +TY
Sbjct: 167 GKWSDGEKLVNEMFSAGCEPNVVTYSILMSSLCRDGKLDEAINLLKIMMDKGLTPDTFTY 226
Query: 363 NVIIRGMCKEGMVDEAYAFVRSLPSRGCNPDVISYNIXXXXXXXXXRWKEGEGLISEMIS 184
+ +I CK G +D A F+ + S GC PD+++YN + E + ++
Sbjct: 227 DPLISAFCKGGRLDLAIKFLDYMISNGCLPDIVNYNTILSTMCKKGKADEAMEVFEKLAE 286
Query: 183 NGCGPNVVTYSILINSLCQDGKVDMAVDVLKDMMKSGLVPDTYSYDPVISAFCKEGRLEV 4
GC P+V TY+ ++++L +G+ A+ ++ +M++ G+ PD +Y+ +IS C++G +
Sbjct: 287 IGCPPDVSTYNTMMSALWNNGERARALILVPEMIEKGIDPDEITYNSLISCLCRDGLVNE 346
Query: 3 A 1
A
Sbjct: 347 A 347
Score = 97.4 bits (241), Expect = 4e-18
Identities = 48/165 (29%), Positives = 87/165 (52%)
Frame = -3
Query: 543 GKLGSALKALDQLLEDNCTPTVVTYTILIEATITERGTQSAMKLLDEMSSKGLRPDMYTY 364
G+L A+K LD ++ + C P +V Y ++ + AM++ ++++ G PD+ TY
Sbjct: 237 GRLDLAIKFLDYMISNGCLPDIVNYNTILSTMCKKGKADEAMEVFEKLAEIGCPPDVSTY 296
Query: 363 NVIIRGMCKEGMVDEAYAFVRSLPSRGCNPDVISYNIXXXXXXXXXRWKEGEGLISEMIS 184
N ++ + G A V + +G +PD I+YN E L+ +M
Sbjct: 297 NTMMSALWNNGERARALILVPEMIEKGIDPDEITYNSLISCLCRDGLVNEALDLLVDMEG 356
Query: 183 NGCGPNVVTYSILINSLCQDGKVDMAVDVLKDMMKSGLVPDTYSY 49
NG P V+TY+IL+ LC+ ++D A++VL++M++ G P+ +Y
Sbjct: 357 NGFPPTVITYNILLLGLCKAHRIDEAIEVLREMVEKGRRPNETTY 401
Score = 90.1 bits (222), Expect = 6e-16
Identities = 50/167 (29%), Positives = 78/167 (46%), Gaps = 1/167 (0%)
Frame = -3
Query: 510 QLLEDNCTPTVVTYTILIEATITERGTQSAMKLLDEMSSKGLRPDMYTYNVIIRGMCKEG 331
Q+LE P V Y LI A K+L+ M S G PD TYN++I +C G
Sbjct: 2 QILEQFGEPDVFAYNALISGFCKMNKIVEANKVLNRMKSHGFPPDAVTYNILIGSLCDRG 61
Query: 330 MVDEAYAFVRSL-PSRGCNPDVISYNIXXXXXXXXXRWKEGEGLISEMISNGCGPNVVTY 154
+ A + L + C P VI+Y I E L+ EM+S G P++ TY
Sbjct: 62 KLGLALKLLDQLKEEKNCKPTVITYTILIEATILEGGIHEAMKLLDEMLSTGLQPDMYTY 121
Query: 153 SILINSLCQDGKVDMAVDVLKDMMKSGLVPDTYSYDPVISAFCKEGR 13
+ +I +C++ D A + ++ + G PD SY+ ++ A +G+
Sbjct: 122 NAIIRGMCREKMTDQAYEFVRSLPSKGCKPDVISYNILLRALLHKGK 168
Score = 84.7 bits (208), Expect = 2e-14
Identities = 49/159 (30%), Positives = 77/159 (48%)
Frame = -3
Query: 543 GKLGSALKALDQLLEDNCTPTVVTYTILIEATITERGTQSAMKLLDEMSSKGLRPDMYTY 364
GK A++ ++L E C P V TY ++ A A+ L+ EM KG+ PD TY
Sbjct: 272 GKADEAMEVFEKLAEIGCPPDVSTYNTMMSALWNNGERARALILVPEMIEKGIDPDEITY 331
Query: 363 NVIIRGMCKEGMVDEAYAFVRSLPSRGCNPDVISYNIXXXXXXXXXRWKEGEGLISEMIS 184
N +I +C++G+V+EA + + G P VI+YNI R E ++ EM+
Sbjct: 332 NSLISCLCRDGLVNEALDLLVDMEGNGFPPTVITYNILLLGLCKAHRIDEAIEVLREMVE 391
Query: 183 NGCGPNVVTYSILINSLCQDGKVDMAVDVLKDMMKSGLV 67
G PN TY +LI + G A++V + + +
Sbjct: 392 KGRRPNETTYILLIEGIGFSGWRVQAMEVANSLYQKNAI 430
>ref|XP_009612667.1| PREDICTED: pentatricopeptide repeat-containing protein At3g04760,
chloroplastic isoform X1 [Nicotiana tomentosiformis]
Length = 586
Score = 250 bits (638), Expect = 3e-64
Identities = 123/182 (67%), Positives = 145/182 (79%), Gaps = 1/182 (0%)
Frame = -3
Query: 543 GKLGSALKALDQLLED-NCTPTVVTYTILIEATITERGTQSAMKLLDEMSSKGLRPDMYT 367
GKLG ALK LDQL E+ NC PTV+TYTILIEATI E G AMKLLDEM S GL+PDMYT
Sbjct: 189 GKLGLALKLLDQLKEEKNCKPTVITYTILIEATILEGGIHEAMKLLDEMLSTGLQPDMYT 248
Query: 366 YNVIIRGMCKEGMVDEAYAFVRSLPSRGCNPDVISYNIXXXXXXXXXRWKEGEGLISEMI 187
YN IIRGMC+E M D+AY FVRSLPS+GC PDVISYNI +W +GE L++EM
Sbjct: 249 YNAIIRGMCREKMTDQAYEFVRSLPSKGCKPDVISYNILLRALLHKGKWSDGEKLVNEMF 308
Query: 186 SNGCGPNVVTYSILINSLCQDGKVDMAVDVLKDMMKSGLVPDTYSYDPVISAFCKEGRLE 7
S GC PNVVTYSIL++SLC+DGK+D A+++LK MM GL PDT++YDP+ISAFCK GRL+
Sbjct: 309 SAGCEPNVVTYSILMSSLCRDGKLDEAINLLKIMMDKGLTPDTFTYDPLISAFCKGGRLD 368
Query: 6 VA 1
+A
Sbjct: 369 LA 370
Score = 118 bits (296), Expect = 1e-24
Identities = 69/186 (37%), Positives = 94/186 (50%), Gaps = 5/186 (2%)
Frame = -3
Query: 543 GKLGSALKALDQLLEDNCTPTVVTYTILIEATITERGTQSAMKLLDEMSSKGLRPDMYTY 364
GKL A+ L +++ TP TY LI A A+K LD M S G PD+ Y
Sbjct: 330 GKLDEAINLLKIMMDKGLTPDTFTYDPLISAFCKGGRLDLAIKFLDYMISNGCLPDIVNY 389
Query: 363 NVIIRGMCKEGMVDEAYAFVRSLPSRGCNPDVISYNIXXXXXXXXXRWKEGEG-----LI 199
N I+ MCK+G DEA L GC PDV +YN W GE L+
Sbjct: 390 NTILSTMCKKGKADEAMEVFEKLAEIGCPPDVSTYNTMMSAL-----WNNGERARALILV 444
Query: 198 SEMISNGCGPNVVTYSILINSLCQDGKVDMAVDVLKDMMKSGLVPDTYSYDPVISAFCKE 19
EMI G P+ +TY+ LI+ LC+DG V+ A+D+L DM +G P +Y+ ++ CK
Sbjct: 445 PEMIEKGIDPDEITYNSLISCLCRDGLVNEALDLLVDMEGNGFPPTVITYNILLLGLCKA 504
Query: 18 GRLEVA 1
R++ A
Sbjct: 505 HRIDEA 510
Score = 112 bits (281), Expect = 8e-23
Identities = 56/181 (30%), Positives = 99/181 (54%)
Frame = -3
Query: 543 GKLGSALKALDQLLEDNCTPTVVTYTILIEATITERGTQSAMKLLDEMSSKGLRPDMYTY 364
GK K ++++ C P VVTY+IL+ + + A+ LL M KGL PD +TY
Sbjct: 295 GKWSDGEKLVNEMFSAGCEPNVVTYSILMSSLCRDGKLDEAINLLKIMMDKGLTPDTFTY 354
Query: 363 NVIIRGMCKEGMVDEAYAFVRSLPSRGCNPDVISYNIXXXXXXXXXRWKEGEGLISEMIS 184
+ +I CK G +D A F+ + S GC PD+++YN + E + ++
Sbjct: 355 DPLISAFCKGGRLDLAIKFLDYMISNGCLPDIVNYNTILSTMCKKGKADEAMEVFEKLAE 414
Query: 183 NGCGPNVVTYSILINSLCQDGKVDMAVDVLKDMMKSGLVPDTYSYDPVISAFCKEGRLEV 4
GC P+V TY+ ++++L +G+ A+ ++ +M++ G+ PD +Y+ +IS C++G +
Sbjct: 415 IGCPPDVSTYNTMMSALWNNGERARALILVPEMIEKGIDPDEITYNSLISCLCRDGLVNE 474
Query: 3 A 1
A
Sbjct: 475 A 475
Score = 97.4 bits (241), Expect = 4e-18
Identities = 48/165 (29%), Positives = 87/165 (52%)
Frame = -3
Query: 543 GKLGSALKALDQLLEDNCTPTVVTYTILIEATITERGTQSAMKLLDEMSSKGLRPDMYTY 364
G+L A+K LD ++ + C P +V Y ++ + AM++ ++++ G PD+ TY
Sbjct: 365 GRLDLAIKFLDYMISNGCLPDIVNYNTILSTMCKKGKADEAMEVFEKLAEIGCPPDVSTY 424
Query: 363 NVIIRGMCKEGMVDEAYAFVRSLPSRGCNPDVISYNIXXXXXXXXXRWKEGEGLISEMIS 184
N ++ + G A V + +G +PD I+YN E L+ +M
Sbjct: 425 NTMMSALWNNGERARALILVPEMIEKGIDPDEITYNSLISCLCRDGLVNEALDLLVDMEG 484
Query: 183 NGCGPNVVTYSILINSLCQDGKVDMAVDVLKDMMKSGLVPDTYSY 49
NG P V+TY+IL+ LC+ ++D A++VL++M++ G P+ +Y
Sbjct: 485 NGFPPTVITYNILLLGLCKAHRIDEAIEVLREMVEKGRRPNETTY 529
Score = 91.3 bits (225), Expect = 3e-16
Identities = 53/173 (30%), Positives = 82/173 (47%), Gaps = 1/173 (0%)
Frame = -3
Query: 528 ALKALDQLLEDNCTPTVVTYTILIEATITERGTQSAMKLLDEMSSKGLRPDMYTYNVIIR 349
ALK + Q+LE P V Y LI A K+L+ M S G PD TYN++I
Sbjct: 125 ALKVM-QILEQFGEPDVFAYNALISGFCKMNKIVEANKVLNRMKSHGFPPDAVTYNILIG 183
Query: 348 GMCKEGMVDEAYAFVRSL-PSRGCNPDVISYNIXXXXXXXXXRWKEGEGLISEMISNGCG 172
+C G + A + L + C P VI+Y I E L+ EM+S G
Sbjct: 184 SLCDRGKLGLALKLLDQLKEEKNCKPTVITYTILIEATILEGGIHEAMKLLDEMLSTGLQ 243
Query: 171 PNVVTYSILINSLCQDGKVDMAVDVLKDMMKSGLVPDTYSYDPVISAFCKEGR 13
P++ TY+ +I +C++ D A + ++ + G PD SY+ ++ A +G+
Sbjct: 244 PDMYTYNAIIRGMCREKMTDQAYEFVRSLPSKGCKPDVISYNILLRALLHKGK 296
Score = 84.7 bits (208), Expect = 2e-14
Identities = 49/159 (30%), Positives = 77/159 (48%)
Frame = -3
Query: 543 GKLGSALKALDQLLEDNCTPTVVTYTILIEATITERGTQSAMKLLDEMSSKGLRPDMYTY 364
GK A++ ++L E C P V TY ++ A A+ L+ EM KG+ PD TY
Sbjct: 400 GKADEAMEVFEKLAEIGCPPDVSTYNTMMSALWNNGERARALILVPEMIEKGIDPDEITY 459
Query: 363 NVIIRGMCKEGMVDEAYAFVRSLPSRGCNPDVISYNIXXXXXXXXXRWKEGEGLISEMIS 184
N +I +C++G+V+EA + + G P VI+YNI R E ++ EM+
Sbjct: 460 NSLISCLCRDGLVNEALDLLVDMEGNGFPPTVITYNILLLGLCKAHRIDEAIEVLREMVE 519
Query: 183 NGCGPNVVTYSILINSLCQDGKVDMAVDVLKDMMKSGLV 67
G PN TY +LI + G A++V + + +
Sbjct: 520 KGRRPNETTYILLIEGIGFSGWRVQAMEVANSLYQKNAI 558
Score = 68.2 bits (165), Expect = 2e-09
Identities = 46/169 (27%), Positives = 75/169 (44%), Gaps = 37/169 (21%)
Frame = -3
Query: 414 LLD-EMSSKGLRPDMYTYNVIIRGMCKEGMVDEAYAFVRSLPSRGCNPDVISYNIXXXXX 238
LLD ++ + G +PD+ +I+G C D+A ++ L G PDV +YN
Sbjct: 92 LLDCKVKNNGYKPDVILCTKLIKGFCNSKNTDKALKVMQILEQFG-EPDVFAYNALISGF 150
Query: 237 XXXXRWKEGEGLISEMISNGCGPNVVTYSILINSLCQDGKVDM----------------- 109
+ E +++ M S+G P+ VTY+ILI SLC GK+ +
Sbjct: 151 CKMNKIVEANKVLNRMKSHGFPPDAVTYNILIGSLCDRGKLGLALKLLDQLKEEKNCKPT 210
Query: 108 -------------------AVDVLKDMMKSGLVPDTYSYDPVISAFCKE 19
A+ +L +M+ +GL PD Y+Y+ +I C+E
Sbjct: 211 VITYTILIEATILEGGIHEAMKLLDEMLSTGLQPDMYTYNAIIRGMCRE 259
>ref|XP_009767473.1| PREDICTED: pentatricopeptide repeat-containing protein At3g04760,
chloroplastic [Nicotiana sylvestris]
Length = 585
Score = 249 bits (637), Expect = 4e-64
Identities = 123/182 (67%), Positives = 146/182 (80%), Gaps = 1/182 (0%)
Frame = -3
Query: 543 GKLGSALKALDQLLED-NCTPTVVTYTILIEATITERGTQSAMKLLDEMSSKGLRPDMYT 367
GKLG ALK LDQL E+ NC PTV+TYTILIEATI E G AMKLLDEM S GL+PDMYT
Sbjct: 189 GKLGLALKLLDQLKEERNCKPTVITYTILIEATILEGGIHEAMKLLDEMLSIGLQPDMYT 248
Query: 366 YNVIIRGMCKEGMVDEAYAFVRSLPSRGCNPDVISYNIXXXXXXXXXRWKEGEGLISEMI 187
YN IIRGMC+E M+D+AY FVRSLPS+GC PDVISYNI +W +GE L++EM
Sbjct: 249 YNAIIRGMCREKMMDQAYEFVRSLPSKGCKPDVISYNILLRALLHKGKWSDGEKLVNEMF 308
Query: 186 SNGCGPNVVTYSILINSLCQDGKVDMAVDVLKDMMKSGLVPDTYSYDPVISAFCKEGRLE 7
S GC PNVVTYSIL++SLC+DGK+D A+++LK MM GL PDT++YDP+ISAFCK GRL+
Sbjct: 309 SAGCEPNVVTYSILMSSLCRDGKLDEAINLLKIMMDKGLTPDTFTYDPLISAFCKGGRLD 368
Query: 6 VA 1
+A
Sbjct: 369 LA 370
Score = 120 bits (300), Expect = 5e-25
Identities = 70/186 (37%), Positives = 95/186 (51%), Gaps = 5/186 (2%)
Frame = -3
Query: 543 GKLGSALKALDQLLEDNCTPTVVTYTILIEATITERGTQSAMKLLDEMSSKGLRPDMYTY 364
GKL A+ L +++ TP TY LI A A+K LD M S G PD+ Y
Sbjct: 330 GKLDEAINLLKIMMDKGLTPDTFTYDPLISAFCKGGRLDLAIKFLDYMISNGCLPDIVNY 389
Query: 363 NVIIRGMCKEGMVDEAYAFVRSLPSRGCNPDVISYNIXXXXXXXXXRWKEGEG-----LI 199
N I+ MCK+G DEA L GC PDV +YN W GE L+
Sbjct: 390 NTILSTMCKKGKADEAMEVFEKLAEIGCPPDVSTYNTMMSAL-----WNNGERARALRLV 444
Query: 198 SEMISNGCGPNVVTYSILINSLCQDGKVDMAVDVLKDMMKSGLVPDTYSYDPVISAFCKE 19
SEMI G P+ +TY+ LI+ LC+DG V+ A+D+L DM +G P +Y+ ++ CK
Sbjct: 445 SEMIEKGIDPDEITYNSLISCLCRDGLVNEALDLLGDMEGNGFPPTVITYNILLLGLCKA 504
Query: 18 GRLEVA 1
R++ A
Sbjct: 505 HRVDEA 510
Score = 97.1 bits (240), Expect = 5e-18
Identities = 49/165 (29%), Positives = 86/165 (52%)
Frame = -3
Query: 543 GKLGSALKALDQLLEDNCTPTVVTYTILIEATITERGTQSAMKLLDEMSSKGLRPDMYTY 364
G+L A+K LD ++ + C P +V Y ++ + AM++ ++++ G PD+ TY
Sbjct: 365 GRLDLAIKFLDYMISNGCLPDIVNYNTILSTMCKKGKADEAMEVFEKLAEIGCPPDVSTY 424
Query: 363 NVIIRGMCKEGMVDEAYAFVRSLPSRGCNPDVISYNIXXXXXXXXXRWKEGEGLISEMIS 184
N ++ + G A V + +G +PD I+YN E L+ +M
Sbjct: 425 NTMMSALWNNGERARALRLVSEMIEKGIDPDEITYNSLISCLCRDGLVNEALDLLGDMEG 484
Query: 183 NGCGPNVVTYSILINSLCQDGKVDMAVDVLKDMMKSGLVPDTYSY 49
NG P V+TY+IL+ LC+ +VD A++VL+ M++ G P+ +Y
Sbjct: 485 NGFPPTVITYNILLLGLCKAHRVDEAIEVLRVMVEKGRRPNETTY 529
Score = 94.0 bits (232), Expect = 4e-17
Identities = 54/173 (31%), Positives = 85/173 (49%), Gaps = 1/173 (0%)
Frame = -3
Query: 528 ALKALDQLLEDNCTPTVVTYTILIEATITERGTQSAMKLLDEMSSKGLRPDMYTYNVIIR 349
ALK + Q+LE+ P V Y LI + A K+L+ M S G PD TYN++I
Sbjct: 125 ALKVM-QILEEFGEPDVFAYNALISGFCKMNKIEEANKVLNRMKSHGFPPDAVTYNILIG 183
Query: 348 GMCKEGMVDEAYAFVRSL-PSRGCNPDVISYNIXXXXXXXXXRWKEGEGLISEMISNGCG 172
+C G + A + L R C P VI+Y I E L+ EM+S G
Sbjct: 184 SLCDRGKLGLALKLLDQLKEERNCKPTVITYTILIEATILEGGIHEAMKLLDEMLSIGLQ 243
Query: 171 PNVVTYSILINSLCQDGKVDMAVDVLKDMMKSGLVPDTYSYDPVISAFCKEGR 13
P++ TY+ +I +C++ +D A + ++ + G PD SY+ ++ A +G+
Sbjct: 244 PDMYTYNAIIRGMCREKMMDQAYEFVRSLPSKGCKPDVISYNILLRALLHKGK 296
Score = 84.7 bits (208), Expect = 2e-14
Identities = 48/159 (30%), Positives = 77/159 (48%)
Frame = -3
Query: 543 GKLGSALKALDQLLEDNCTPTVVTYTILIEATITERGTQSAMKLLDEMSSKGLRPDMYTY 364
GK A++ ++L E C P V TY ++ A A++L+ EM KG+ PD TY
Sbjct: 400 GKADEAMEVFEKLAEIGCPPDVSTYNTMMSALWNNGERARALRLVSEMIEKGIDPDEITY 459
Query: 363 NVIIRGMCKEGMVDEAYAFVRSLPSRGCNPDVISYNIXXXXXXXXXRWKEGEGLISEMIS 184
N +I +C++G+V+EA + + G P VI+YNI R E ++ M+
Sbjct: 460 NSLISCLCRDGLVNEALDLLGDMEGNGFPPTVITYNILLLGLCKAHRVDEAIEVLRVMVE 519
Query: 183 NGCGPNVVTYSILINSLCQDGKVDMAVDVLKDMMKSGLV 67
G PN TY +LI + G A++V + + +
Sbjct: 520 KGRRPNETTYILLIEGIGFSGWRVQAMEVASSLYQKNAI 558
Score = 68.6 bits (166), Expect = 2e-09
Identities = 47/175 (26%), Positives = 78/175 (44%), Gaps = 37/175 (21%)
Frame = -3
Query: 414 LLD-EMSSKGLRPDMYTYNVIIRGMCKEGMVDEAYAFVRSLPSRGCNPDVISYNIXXXXX 238
LLD ++ + G +PD+ +I+G C D+A ++ L G PDV +YN
Sbjct: 92 LLDCKVKNNGYKPDVILCTKLIKGFCNSKNSDKALKVMQILEEFG-EPDVFAYNALISGF 150
Query: 237 XXXXRWKEGEGLISEMISNGCGPNVVTYSILINSLCQDGKVDM----------------- 109
+ +E +++ M S+G P+ VTY+ILI SLC GK+ +
Sbjct: 151 CKMNKIEEANKVLNRMKSHGFPPDAVTYNILIGSLCDRGKLGLALKLLDQLKEERNCKPT 210
Query: 108 -------------------AVDVLKDMMKSGLVPDTYSYDPVISAFCKEGRLEVA 1
A+ +L +M+ GL PD Y+Y+ +I C+E ++ A
Sbjct: 211 VITYTILIEATILEGGIHEAMKLLDEMLSIGLQPDMYTYNAIIRGMCREKMMDQA 265
>ref|XP_007030407.1| Pentatricopeptide repeat (PPR-like) superfamily protein [Theobroma
cacao] gi|508719012|gb|EOY10909.1| Pentatricopeptide
repeat (PPR-like) superfamily protein [Theobroma cacao]
Length = 586
Score = 249 bits (635), Expect = 7e-64
Identities = 120/181 (66%), Positives = 146/181 (80%)
Frame = -3
Query: 543 GKLGSALKALDQLLEDNCTPTVVTYTILIEATITERGTQSAMKLLDEMSSKGLRPDMYTY 364
GKL SA K ++QLL+DNC P+V+TYTILIEAT+ + AMKLLDEM SKGLRPDM+TY
Sbjct: 190 GKLDSAYKVINQLLKDNCKPSVITYTILIEATMLQGEINEAMKLLDEMLSKGLRPDMFTY 249
Query: 363 NVIIRGMCKEGMVDEAYAFVRSLPSRGCNPDVISYNIXXXXXXXXXRWKEGEGLISEMIS 184
N IIRGMCK+GMV+ A+ FVRSL +RGC PDVISYNI +W EGE L++EM+S
Sbjct: 250 NAIIRGMCKDGMVNRAFKFVRSLKARGCQPDVISYNILLRVLLNQGKWAEGEKLVTEMVS 309
Query: 183 NGCGPNVVTYSILINSLCQDGKVDMAVDVLKDMMKSGLVPDTYSYDPVISAFCKEGRLEV 4
GC PNVVTYSILI+SLC++GK++ AV+VLK M + GL PD YSYDP+ISAFCKEGRL++
Sbjct: 310 RGCEPNVVTYSILISSLCREGKLEEAVNVLKMMKERGLTPDAYSYDPLISAFCKEGRLDL 369
Query: 3 A 1
A
Sbjct: 370 A 370
Score = 116 bits (290), Expect = 7e-24
Identities = 66/181 (36%), Positives = 93/181 (51%)
Frame = -3
Query: 543 GKLGSALKALDQLLEDNCTPTVVTYTILIEATITERGTQSAMKLLDEMSSKGLRPDMYTY 364
GKL A+ L + E TP +Y LI A E A++ LD M S G PD+ Y
Sbjct: 330 GKLEEAVNVLKMMKERGLTPDAYSYDPLISAFCKEGRLDLAIEFLDCMISDGCLPDIVNY 389
Query: 363 NVIIRGMCKEGMVDEAYAFVRSLPSRGCNPDVISYNIXXXXXXXXXRWKEGEGLISEMIS 184
N ++ +CK G ++A L GC P+V SYN + +ISEM+S
Sbjct: 390 NTVLATLCKNGKAEQALEIFEKLREVGCPPNVSSYNTMFSALWSSGDKVKALEMISEMLS 449
Query: 183 NGCGPNVVTYSILINSLCQDGKVDMAVDVLKDMMKSGLVPDTYSYDPVISAFCKEGRLEV 4
GP+ +TY+ LI+ LC+DG VD A+++L DM SG+ P SY+ V+ CK R+
Sbjct: 450 KRIGPDEITYNSLISCLCRDGMVDEAIELLVDMGCSGIPPTVISYNIVLLGLCKVHRIND 509
Query: 3 A 1
A
Sbjct: 510 A 510
Score = 103 bits (258), Expect = 4e-20
Identities = 52/166 (31%), Positives = 80/166 (48%)
Frame = -3
Query: 510 QLLEDNCTPTVVTYTILIEATITERGTQSAMKLLDEMSSKGLRPDMYTYNVIIRGMCKEG 331
++LE P V Y +I A K+LD M S+G PD+ TYN++I C G
Sbjct: 131 EILEKYGEPDVFAYNAIISGFCKMNRLDFANKVLDRMRSRGFSPDVVTYNIMIGSFCSRG 190
Query: 330 MVDEAYAFVRSLPSRGCNPDVISYNIXXXXXXXXXRWKEGEGLISEMISNGCGPNVVTYS 151
+D AY + L C P VI+Y I E L+ EM+S G P++ TY+
Sbjct: 191 KLDSAYKVINQLLKDNCKPSVITYTILIEATMLQGEINEAMKLLDEMLSKGLRPDMFTYN 250
Query: 150 ILINSLCQDGKVDMAVDVLKDMMKSGLVPDTYSYDPVISAFCKEGR 13
+I +C+DG V+ A ++ + G PD SY+ ++ +G+
Sbjct: 251 AIIRGMCKDGMVNRAFKFVRSLKARGCQPDVISYNILLRVLLNQGK 296
Score = 84.7 bits (208), Expect = 2e-14
Identities = 46/137 (33%), Positives = 70/137 (51%)
Frame = -3
Query: 543 GKLGSALKALDQLLEDNCTPTVVTYTILIEATITERGTQSAMKLLDEMSSKGLRPDMYTY 364
GK AL+ ++L E C P V +Y + A + A++++ EM SK + PD TY
Sbjct: 400 GKAEQALEIFEKLREVGCPPNVSSYNTMFSALWSSGDKVKALEMISEMLSKRIGPDEITY 459
Query: 363 NVIIRGMCKEGMVDEAYAFVRSLPSRGCNPDVISYNIXXXXXXXXXRWKEGEGLISEMIS 184
N +I +C++GMVDEA + + G P VISYNI R + +++ M+
Sbjct: 460 NSLISCLCRDGMVDEAIELLVDMGCSGIPPTVISYNIVLLGLCKVHRINDAIEVLAAMVD 519
Query: 183 NGCGPNVVTYSILINSL 133
C PN TY +LI +
Sbjct: 520 KRCQPNETTYILLIEGI 536
Score = 84.3 bits (207), Expect = 3e-14
Identities = 48/175 (27%), Positives = 82/175 (46%), Gaps = 34/175 (19%)
Frame = -3
Query: 423 AMKLLDEMSSKGLR----------------------------------PDMYTYNVIIRG 346
A L+ M KG + PD++ YN II G
Sbjct: 91 AFYFLECMVGKGYKPDVVLCTKMIKGFFNGRNVEKATRVIEILEKYGEPDVFAYNAIISG 150
Query: 345 MCKEGMVDEAYAFVRSLPSRGCNPDVISYNIXXXXXXXXXRWKEGEGLISEMISNGCGPN 166
CK +D A + + SRG +PDV++YNI + +I++++ + C P+
Sbjct: 151 FCKMNRLDFANKVLDRMRSRGFSPDVVTYNIMIGSFCSRGKLDSAYKVINQLLKDNCKPS 210
Query: 165 VVTYSILINSLCQDGKVDMAVDVLKDMMKSGLVPDTYSYDPVISAFCKEGRLEVA 1
V+TY+ILI + G+++ A+ +L +M+ GL PD ++Y+ +I CK+G + A
Sbjct: 211 VITYTILIEATMLQGEINEAMKLLDEMLSKGLRPDMFTYNAIIRGMCKDGMVNRA 265
Score = 58.9 bits (141), Expect = 1e-06
Identities = 32/119 (26%), Positives = 58/119 (48%)
Frame = -3
Query: 357 IIRGMCKEGMVDEAYAFVRSLPSRGCNPDVISYNIXXXXXXXXXRWKEGEGLISEMISNG 178
++ CK G +EA+ F+ + +G PDV+ ++ +I E++
Sbjct: 78 LLNRSCKAGKYNEAFYFLECMVGKGYKPDVVLCTKMIKGFFNGRNVEKATRVI-EILEKY 136
Query: 177 CGPNVVTYSILINSLCQDGKVDMAVDVLKDMMKSGLVPDTYSYDPVISAFCKEGRLEVA 1
P+V Y+ +I+ C+ ++D A VL M G PD +Y+ +I +FC G+L+ A
Sbjct: 137 GEPDVFAYNAIISGFCKMNRLDFANKVLDRMRSRGFSPDVVTYNIMIGSFCSRGKLDSA 195
>ref|XP_006361415.1| PREDICTED: pentatricopeptide repeat-containing protein At3g04760,
chloroplastic-like [Solanum tuberosum]
Length = 583
Score = 248 bits (633), Expect = 1e-63
Identities = 123/183 (67%), Positives = 149/183 (81%), Gaps = 2/183 (1%)
Frame = -3
Query: 543 GKLGSALKALDQLLEDN-CTPTVVTYTILIEATITERGTQSAMKLLDEMSSKGLRPDMYT 367
GKLGSALK LDQL E+N C PTV+TYTILIEATI E G AMKLLDEM S+GL+PDMYT
Sbjct: 180 GKLGSALKLLDQLKEENNCKPTVITYTILIEATILEGGIHEAMKLLDEMLSRGLQPDMYT 239
Query: 366 YNVIIRGMCKEGMVDEAYAFVRSLPSRGCNPDVISYNI-XXXXXXXXXRWKEGEGLISEM 190
YN IIRGMC+E M+D+AY FVRSLPS+GC PDVISYNI +W +GE L++EM
Sbjct: 240 YNAIIRGMCREKMMDQAYEFVRSLPSKGCKPDVISYNILLRALLHHKGKWSDGEKLMNEM 299
Query: 189 ISNGCGPNVVTYSILINSLCQDGKVDMAVDVLKDMMKSGLVPDTYSYDPVISAFCKEGRL 10
+S GC PNVVTYSIL+++LC+DGK+D A+++LK MM GL PDT++YDP+ISAFCK GRL
Sbjct: 300 LSAGCEPNVVTYSILMSALCRDGKLDEAINLLKIMMDKGLTPDTFTYDPLISAFCKGGRL 359
Query: 9 EVA 1
++A
Sbjct: 360 DLA 362
Score = 117 bits (294), Expect = 3e-24
Identities = 65/178 (36%), Positives = 90/178 (50%)
Frame = -3
Query: 543 GKLGSALKALDQLLEDNCTPTVVTYTILIEATITERGTQSAMKLLDEMSSKGLRPDMYTY 364
GKL A+ L +++ TP TY LI A A+K LD M S G PD+ Y
Sbjct: 322 GKLDEAINLLKIMMDKGLTPDTFTYDPLISAFCKGGRLDLAIKFLDYMISNGCLPDIVNY 381
Query: 363 NVIIRGMCKEGMVDEAYAFVRSLPSRGCNPDVISYNIXXXXXXXXXRWKEGEGLISEMIS 184
N I+ MCK+G DEA L GC PDV +YN ++SEMI
Sbjct: 382 NTILSTMCKKGKADEAMEVFEKLAEIGCPPDVSTYNTLMSALWNNGGRARALKMVSEMIE 441
Query: 183 NGCGPNVVTYSILINSLCQDGKVDMAVDVLKDMMKSGLVPDTYSYDPVISAFCKEGRL 10
G P+ +TY+ LI+ LC+DG V+ A+D+L DM +G P +Y+ ++ CK R+
Sbjct: 442 KGVDPDEITYNALISCLCRDGMVNEALDLLGDMEGNGFPPTVITYNILLLGLCKAHRV 499
Score = 116 bits (291), Expect = 6e-24
Identities = 59/181 (32%), Positives = 99/181 (54%)
Frame = -3
Query: 543 GKLGSALKALDQLLEDNCTPTVVTYTILIEATITERGTQSAMKLLDEMSSKGLRPDMYTY 364
GK K ++++L C P VVTY+IL+ A + A+ LL M KGL PD +TY
Sbjct: 287 GKWSDGEKLMNEMLSAGCEPNVVTYSILMSALCRDGKLDEAINLLKIMMDKGLTPDTFTY 346
Query: 363 NVIIRGMCKEGMVDEAYAFVRSLPSRGCNPDVISYNIXXXXXXXXXRWKEGEGLISEMIS 184
+ +I CK G +D A F+ + S GC PD+++YN + E + ++
Sbjct: 347 DPLISAFCKGGRLDLAIKFLDYMISNGCLPDIVNYNTILSTMCKKGKADEAMEVFEKLAE 406
Query: 183 NGCGPNVVTYSILINSLCQDGKVDMAVDVLKDMMKSGLVPDTYSYDPVISAFCKEGRLEV 4
GC P+V TY+ L+++L +G A+ ++ +M++ G+ PD +Y+ +IS C++G +
Sbjct: 407 IGCPPDVSTYNTLMSALWNNGGRARALKMVSEMIEKGVDPDEITYNALISCLCRDGMVNE 466
Query: 3 A 1
A
Sbjct: 467 A 467
Score = 96.7 bits (239), Expect = 6e-18
Identities = 58/180 (32%), Positives = 89/180 (49%), Gaps = 14/180 (7%)
Frame = -3
Query: 543 GKLGSALKALDQLLEDNCTPTVVTYTILIEATITERGTQSAMKLLDEMSSKGLRPDMYTY 364
GK A++ ++L E C P V TY L+ A G A+K++ EM KG+ PD TY
Sbjct: 392 GKADEAMEVFEKLAEIGCPPDVSTYNTLMSALWNNGGRARALKMVSEMIEKGVDPDEITY 451
Query: 363 NVIIRGMCKEGMVDEAYAFVRSLPSRGCNPDVISYNIXXXXXXXXXRWKEGEGLISEMIS 184
N +I +C++GMV+EA + + G P VI+YNI R E +++EM+
Sbjct: 452 NALISCLCRDGMVNEALDLLGDMEGNGFPPTVITYNILLLGLCKAHRVVEAIEVLAEMVE 511
Query: 183 NGCGPNVVTYSILINSLCQDGKVDMAVDV--------------LKDMMKSGLVPDTYSYD 46
G PN TY +LI + G+ A+++ L+ + K+ VPD Y+ D
Sbjct: 512 KGRRPNETTYILLIEGIGFSGRRVQAMEMASAIYHKNAISKESLQRLRKTFQVPDVYNKD 571
Score = 96.3 bits (238), Expect = 8e-18
Identities = 51/177 (28%), Positives = 89/177 (50%)
Frame = -3
Query: 543 GKLGSALKALDQLLEDNCTPTVVTYTILIEATITERGTQSAMKLLDEMSSKGLRPDMYTY 364
G+L A+K LD ++ + C P +V Y ++ + AM++ ++++ G PD+ TY
Sbjct: 357 GRLDLAIKFLDYMISNGCLPDIVNYNTILSTMCKKGKADEAMEVFEKLAEIGCPPDVSTY 416
Query: 363 NVIIRGMCKEGMVDEAYAFVRSLPSRGCNPDVISYNIXXXXXXXXXRWKEGEGLISEMIS 184
N ++ + G A V + +G +PD I+YN E L+ +M
Sbjct: 417 NTLMSALWNNGGRARALKMVSEMIEKGVDPDEITYNALISCLCRDGMVNEALDLLGDMEG 476
Query: 183 NGCGPNVVTYSILINSLCQDGKVDMAVDVLKDMMKSGLVPDTYSYDPVISAFCKEGR 13
NG P V+TY+IL+ LC+ +V A++VL +M++ G P+ +Y +I GR
Sbjct: 477 NGFPPTVITYNILLLGLCKAHRVVEAIEVLAEMVEKGRRPNETTYILLIEGIGFSGR 533
Score = 89.7 bits (221), Expect = 7e-16
Identities = 48/161 (29%), Positives = 77/161 (47%), Gaps = 1/161 (0%)
Frame = -3
Query: 510 QLLEDNCTPTVVTYTILIEATITERGTQSAMKLLDEMSSKGLRPDMYTYNVIIRGMCKEG 331
Q+LE P V Y LI + A K+L+ M ++G PD TYN++I +C G
Sbjct: 121 QILEQFGEPDVFAYNALISGFCKMNKIEEANKVLNRMKARGFPPDSVTYNILIGSLCDRG 180
Query: 330 MVDEAYAFVRSL-PSRGCNPDVISYNIXXXXXXXXXRWKEGEGLISEMISNGCGPNVVTY 154
+ A + L C P VI+Y I E L+ EM+S G P++ TY
Sbjct: 181 KLGSALKLLDQLKEENNCKPTVITYTILIEATILEGGIHEAMKLLDEMLSRGLQPDMYTY 240
Query: 153 SILINSLCQDGKVDMAVDVLKDMMKSGLVPDTYSYDPVISA 31
+ +I +C++ +D A + ++ + G PD SY+ ++ A
Sbjct: 241 NAIIRGMCREKMMDQAYEFVRSLPSKGCKPDVISYNILLRA 281
Score = 63.5 bits (153), Expect = 6e-08
Identities = 41/173 (23%), Positives = 72/173 (41%), Gaps = 35/173 (20%)
Frame = -3
Query: 414 LLDEMSSKGLRPDMYTYNVIIRGMCKE--------------------------------- 334
LL+ G +PD+ +I+G C
Sbjct: 84 LLECKLKSGYKPDVILCTKLIKGFCNSKNSDKGVKVMQILEQFGEPDVFAYNALISGFCK 143
Query: 333 -GMVDEAYAFVRSLPSRGCNPDVISYNIXXXXXXXXXRWKEGEGLISEM-ISNGCGPNVV 160
++EA + + +RG PD ++YNI + L+ ++ N C P V+
Sbjct: 144 MNKIEEANKVLNRMKARGFPPDSVTYNILIGSLCDRGKLGSALKLLDQLKEENNCKPTVI 203
Query: 159 TYSILINSLCQDGKVDMAVDVLKDMMKSGLVPDTYSYDPVISAFCKEGRLEVA 1
TY+ILI + +G + A+ +L +M+ GL PD Y+Y+ +I C+E ++ A
Sbjct: 204 TYTILIEATILEGGIHEAMKLLDEMLSRGLQPDMYTYNAIIRGMCREKMMDQA 256
>ref|XP_011076945.1| PREDICTED: pentatricopeptide repeat-containing protein At3g04760,
chloroplastic [Sesamum indicum]
Length = 582
Score = 246 bits (628), Expect = 5e-63
Identities = 118/181 (65%), Positives = 143/181 (79%)
Frame = -3
Query: 543 GKLGSALKALDQLLEDNCTPTVVTYTILIEATITERGTQSAMKLLDEMSSKGLRPDMYTY 364
GKL AL+ LDQL++DNC PTV+TYTILIEATI E G AMKL DEM S+GL+PDMYTY
Sbjct: 186 GKLNLALEMLDQLIKDNCQPTVITYTILIEATILEGGIGEAMKLFDEMLSRGLQPDMYTY 245
Query: 363 NVIIRGMCKEGMVDEAYAFVRSLPSRGCNPDVISYNIXXXXXXXXXRWKEGEGLISEMIS 184
N IIRGMC+ GM+DEA+ FVR+L SRGC PDVISYNI +W +GE L+ EM S
Sbjct: 246 NTIIRGMCRGGMMDEAFTFVRNLTSRGCKPDVISYNILLRALLSQGKWDDGEKLMIEMFS 305
Query: 183 NGCGPNVVTYSILINSLCQDGKVDMAVDVLKDMMKSGLVPDTYSYDPVISAFCKEGRLEV 4
GC PNVVTYSI+I+ LC+DG++D A+++LK MM GL PDTY+YDP+ISA CKEGRL++
Sbjct: 306 TGCEPNVVTYSIMISGLCRDGQLDEAINLLKLMMDEGLTPDTYTYDPLISALCKEGRLDL 365
Query: 3 A 1
A
Sbjct: 366 A 366
Score = 120 bits (302), Expect = 3e-25
Identities = 65/178 (36%), Positives = 90/178 (50%)
Frame = -3
Query: 543 GKLGSALKALDQLLEDNCTPTVVTYTILIEATITERGTQSAMKLLDEMSSKGLRPDMYTY 364
G+L A+ L ++++ TP TY LI A E A+ LD M S G PD+ Y
Sbjct: 326 GQLDEAINLLKLMMDEGLTPDTYTYDPLISALCKEGRLDLAIAFLDYMISSGCFPDIVNY 385
Query: 363 NVIIRGMCKEGMVDEAYAFVRSLPSRGCNPDVISYNIXXXXXXXXXRWKEGEGLISEMIS 184
N I+ +CK G DEA L GC PDV +YN L+SEMI
Sbjct: 386 NTILSALCKNGNADEALEVFGKLAESGCPPDVSTYNTMVSALWNSGDRSRALRLVSEMIH 445
Query: 183 NGCGPNVVTYSILINSLCQDGKVDMAVDVLKDMMKSGLVPDTYSYDPVISAFCKEGRL 10
G P+ +TY+ LI+ LC+DG VD A+++L DM S +P +Y+ V+ CK R+
Sbjct: 446 KGIDPDEITYNSLISCLCRDGMVDRAIELLGDMKNSEFLPTVVTYNIVLLGLCKAHRI 503
Score = 90.9 bits (224), Expect = 3e-16
Identities = 50/159 (31%), Positives = 77/159 (48%)
Frame = -3
Query: 543 GKLGSALKALDQLLEDNCTPTVVTYTILIEATITERGTQSAMKLLDEMSSKGLRPDMYTY 364
G AL+ +L E C P V TY ++ A A++L+ EM KG+ PD TY
Sbjct: 396 GNADEALEVFGKLAESGCPPDVSTYNTMVSALWNSGDRSRALRLVSEMIHKGIDPDEITY 455
Query: 363 NVIIRGMCKEGMVDEAYAFVRSLPSRGCNPDVISYNIXXXXXXXXXRWKEGEGLISEMIS 184
N +I +C++GMVD A + + + P V++YNI R E ++ EM+
Sbjct: 456 NSLISCLCRDGMVDRAIELLGDMKNSEFLPTVVTYNIVLLGLCKAHRIGEAISILEEMVK 515
Query: 183 NGCGPNVVTYSILINSLCQDGKVDMAVDVLKDMMKSGLV 67
GC PN TY +LI + G A+++ + K +V
Sbjct: 516 KGCQPNETTYVLLIEGIGFAGWRVEAMELANSLYKKNVV 554
Score = 90.1 bits (222), Expect = 6e-16
Identities = 46/166 (27%), Positives = 79/166 (47%)
Frame = -3
Query: 510 QLLEDNCTPTVVTYTILIEATITERGTQSAMKLLDEMSSKGLRPDMYTYNVIIRGMCKEG 331
++LE P + Y I +A ++L M ++G PD+ TYN++I +C G
Sbjct: 127 RILERYGEPDIFAYNAFISGLCKVNQIDTANEVLSSMRARGFAPDVVTYNIMIGSLCNRG 186
Query: 330 MVDEAYAFVRSLPSRGCNPDVISYNIXXXXXXXXXRWKEGEGLISEMISNGCGPNVVTYS 151
++ A + L C P VI+Y I E L EM+S G P++ TY+
Sbjct: 187 KLNLALEMLDQLIKDNCQPTVITYTILIEATILEGGIGEAMKLFDEMLSRGLQPDMYTYN 246
Query: 150 ILINSLCQDGKVDMAVDVLKDMMKSGLVPDTYSYDPVISAFCKEGR 13
+I +C+ G +D A ++++ G PD SY+ ++ A +G+
Sbjct: 247 TIIRGMCRGGMMDEAFTFVRNLTSRGCKPDVISYNILLRALLSQGK 292
>emb|CDO99996.1| unnamed protein product [Coffea canephora]
Length = 429
Score = 246 bits (627), Expect = 6e-63
Identities = 116/181 (64%), Positives = 143/181 (79%)
Frame = -3
Query: 543 GKLGSALKALDQLLEDNCTPTVVTYTILIEATITERGTQSAMKLLDEMSSKGLRPDMYTY 364
GKLG ALK DQLL+DNC PTVVTYTILIEAT E G AMKLLDEM KGL+PDMYTY
Sbjct: 186 GKLGLALKVFDQLLQDNCKPTVVTYTILIEATALEGGIHEAMKLLDEMLRKGLQPDMYTY 245
Query: 363 NVIIRGMCKEGMVDEAYAFVRSLPSRGCNPDVISYNIXXXXXXXXXRWKEGEGLISEMIS 184
N IIRGMC+ G++D+A+ FVRSLP++GC PDVISYN+ +WK+GE L++EM S
Sbjct: 246 NAIIRGMCRGGLIDQAFHFVRSLPAKGCKPDVISYNVLLRALLNQGKWKDGEKLVAEMFS 305
Query: 183 NGCGPNVVTYSILINSLCQDGKVDMAVDVLKDMMKSGLVPDTYSYDPVISAFCKEGRLEV 4
C PNVVTYSILI+ LC+DGK+D ++++L+ M GL PDTY+YDP+ISAFC+EGR ++
Sbjct: 306 RDCEPNVVTYSILISCLCRDGKLDESLNLLRVMKDKGLNPDTYTYDPLISAFCREGRTDL 365
Query: 3 A 1
A
Sbjct: 366 A 366
Score = 87.8 bits (216), Expect = 3e-15
Identities = 46/165 (27%), Positives = 75/165 (45%)
Frame = -3
Query: 507 LLEDNCTPTVVTYTILIEATITERGTQSAMKLLDEMSSKGLRPDMYTYNVIIRGMCKEGM 328
+LE P V Y +I T SA ++L M +G D+ TYN++I +C G
Sbjct: 128 ILEQYGEPDVFVYNAVISGFCKVNKTNSANEVLSRMRVRGFSADVVTYNIMIGSLCNRGK 187
Query: 327 VDEAYAFVRSLPSRGCNPDVISYNIXXXXXXXXXRWKEGEGLISEMISNGCGPNVVTYSI 148
+ A L C P V++Y I E L+ EM+ G P++ TY+
Sbjct: 188 LGLALKVFDQLLQDNCKPTVVTYTILIEATALEGGIHEAMKLLDEMLRKGLQPDMYTYNA 247
Query: 147 LINSLCQDGKVDMAVDVLKDMMKSGLVPDTYSYDPVISAFCKEGR 13
+I +C+ G +D A ++ + G PD SY+ ++ A +G+
Sbjct: 248 IIRGMCRGGLIDQAFHFVRSLPAKGCKPDVISYNVLLRALLNQGK 292
Score = 64.7 bits (156), Expect = 3e-08
Identities = 40/141 (28%), Positives = 67/141 (47%)
Frame = -3
Query: 423 AMKLLDEMSSKGLRPDMYTYNVIIRGMCKEGMVDEAYAFVRSLPSRGCNPDVISYNIXXX 244
A+ L+ M ++GL+PD+ +I+G+ ++A + L G PDV YN
Sbjct: 87 ALYFLECMVNRGLKPDVILCTKLIKGLFSLKNAEKAVRVMHILEQYG-EPDVFVYNAVIS 145
Query: 243 XXXXXXRWKEGEGLISEMISNGCGPNVVTYSILINSLCQDGKVDMAVDVLKDMMKSGLVP 64
+ ++S M G +VVTY+I+I SLC GK+ +A+ V +++ P
Sbjct: 146 GFCKVNKTNSANEVLSRMRVRGFSADVVTYNIMIGSLCNRGKLGLALKVFDQLLQDNCKP 205
Query: 63 DTYSYDPVISAFCKEGRLEVA 1
+Y +I A EG + A
Sbjct: 206 TVVTYTILIEATALEGGIHEA 226
Score = 63.5 bits (153), Expect = 6e-08
Identities = 33/91 (36%), Positives = 43/91 (47%)
Frame = -3
Query: 543 GKLGSALKALDQLLEDNCTPTVVTYTILIEATITERGTQSAMKLLDEMSSKGLRPDMYTY 364
GKL +L L + + P TY LI A E T A++ +D M G PD+ Y
Sbjct: 326 GKLDESLNLLRVMKDKGLNPDTYTYDPLISAFCREGRTDLALEFMDYMICNGCLPDIVNY 385
Query: 363 NVIIRGMCKEGMVDEAYAFVRSLPSRGCNPD 271
N I+ MCK G ++A LP GC PD
Sbjct: 386 NTILSAMCKNGNANQALELFGDLPQMGCPPD 416
>ref|XP_008370748.1| PREDICTED: pentatricopeptide repeat-containing protein At3g04760,
chloroplastic-like [Malus domestica]
gi|658040468|ref|XP_008355828.1| PREDICTED:
pentatricopeptide repeat-containing protein At3g04760,
chloroplastic-like [Malus domestica]
Length = 633
Score = 245 bits (625), Expect = 1e-62
Identities = 116/181 (64%), Positives = 143/181 (79%)
Frame = -3
Query: 543 GKLGSALKALDQLLEDNCTPTVVTYTILIEATITERGTQSAMKLLDEMSSKGLRPDMYTY 364
GKLG ALK LDQL++DNC PTV+TYTILIEATI E G AMKLLD M S+GL+PDM+TY
Sbjct: 237 GKLGLALKVLDQLVKDNCRPTVITYTILIEATIPEGGIDEAMKLLDXMLSRGLKPDMHTY 296
Query: 363 NVIIRGMCKEGMVDEAYAFVRSLPSRGCNPDVISYNIXXXXXXXXXRWKEGEGLISEMIS 184
N ++RGMC+EGM+D A+ FVRSL S+GC+P+ +SYNI +W+EGE L+ M S
Sbjct: 297 NAVVRGMCREGMLDRAFEFVRSLDSKGCSPNXVSYNILLRALLNRGKWEEGEKLVXNMCS 356
Query: 183 NGCGPNVVTYSILINSLCQDGKVDMAVDVLKDMMKSGLVPDTYSYDPVISAFCKEGRLEV 4
GC PNVVTYSILI++LC+D KV+ AV+VLK M GL PD YSYDP++SAFCKEGRL++
Sbjct: 357 RGCEPNVVTYSILISTLCRDXKVEDAVNVLKIMKDKGLTPDAYSYDPLVSAFCKEGRLDL 416
Query: 3 A 1
A
Sbjct: 417 A 417
Score = 109 bits (273), Expect = 7e-22
Identities = 60/177 (33%), Positives = 88/177 (49%)
Frame = -3
Query: 540 KLGSALKALDQLLEDNCTPTVVTYTILIEATITERGTQSAMKLLDEMSSKGLRPDMYTYN 361
K+ A+ L + + TP +Y L+ A E A++ LD M S G PD+ YN
Sbjct: 378 KVEDAVNVLKIMKDKGLTPDAYSYDPLVSAFCKEGRLDLAIEFLDYMISDGCLPDIVNYN 437
Query: 360 VIIRGMCKEGMVDEAYAFVRSLPSRGCNPDVISYNIXXXXXXXXXRWKEGEGLISEMISN 181
I+ +CK G D+A +L GC P+V SYN ++SEM+S
Sbjct: 438 TILAALCKSGKADQALQIFENLGEVGCPPNVSSYNTMFSALWNCGDRVRALQMVSEMVSK 497
Query: 180 GCGPNVVTYSILINSLCQDGKVDMAVDVLKDMMKSGLVPDTYSYDPVISAFCKEGRL 10
G P+ +TY+ LI+ LC+DG V+ A+ +L DM G P SY+ V+ CK R+
Sbjct: 498 GIDPDGITYNSLISCLCRDGMVNEAIGLLVDMETGGFQPTVISYNIVLLGLCKTRRI 554
Score = 108 bits (271), Expect = 1e-21
Identities = 55/181 (30%), Positives = 93/181 (51%)
Frame = -3
Query: 543 GKLGSALKALDQLLEDNCTPTVVTYTILIEATITERGTQSAMKLLDEMSSKGLRPDMYTY 364
GK K + + C P VVTY+ILI + + A+ +L M KGL PD Y+Y
Sbjct: 342 GKWEEGEKLVXNMCSRGCEPNVVTYSILISTLCRDXKVEDAVNVLKIMKDKGLTPDAYSY 401
Query: 363 NVIIRGMCKEGMVDEAYAFVRSLPSRGCNPDVISYNIXXXXXXXXXRWKEGEGLISEMIS 184
+ ++ CKEG +D A F+ + S GC PD+++YN + + + +
Sbjct: 402 DPLVSAFCKEGRLDLAIEFLDYMISDGCLPDIVNYNTILAALCKSGKADQALQIFENLGE 461
Query: 183 NGCGPNVVTYSILINSLCQDGKVDMAVDVLKDMMKSGLVPDTYSYDPVISAFCKEGRLEV 4
GC PNV +Y+ + ++L G A+ ++ +M+ G+ PD +Y+ +IS C++G +
Sbjct: 462 VGCPPNVSSYNTMFSALWNCGDRVRALQMVSEMVSKGIDPDGITYNSLISCLCRDGMVNE 521
Query: 3 A 1
A
Sbjct: 522 A 522
Score = 87.0 bits (214), Expect = 5e-15
Identities = 47/137 (34%), Positives = 72/137 (52%)
Frame = -3
Query: 543 GKLGSALKALDQLLEDNCTPTVVTYTILIEATITERGTQSAMKLLDEMSSKGLRPDMYTY 364
GK AL+ + L E C P V +Y + A A++++ EM SKG+ PD TY
Sbjct: 447 GKADQALQIFENLGEVGCPPNVSSYNTMFSALWNCGDRVRALQMVSEMVSKGIDPDGITY 506
Query: 363 NVIIRGMCKEGMVDEAYAFVRSLPSRGCNPDVISYNIXXXXXXXXXRWKEGEGLISEMIS 184
N +I +C++GMV+EA + + + G P VISYNI R + +++ M+
Sbjct: 507 NSLISCLCRDGMVNEAIGLLVDMETGGFQPTVISYNIVLLGLCKTRRIVDAIEVLAAMVE 566
Query: 183 NGCGPNVVTYSILINSL 133
GC PN TY++LI +
Sbjct: 567 KGCRPNETTYTLLIEGI 583
Score = 85.9 bits (211), Expect = 1e-14
Identities = 45/169 (26%), Positives = 85/169 (50%)
Frame = -3
Query: 543 GKLGSALKALDQLLEDNCTPTVVTYTILIEATITERGTQSAMKLLDEMSSKGLRPDMYTY 364
G+L A++ LD ++ D C P +V Y ++ A A+++ + + G P++ +Y
Sbjct: 412 GRLDLAIEFLDYMISDGCLPDIVNYNTILAALCKSGKADQALQIFENLGEVGCPPNVSSY 471
Query: 363 NVIIRGMCKEGMVDEAYAFVRSLPSRGCNPDVISYNIXXXXXXXXXRWKEGEGLISEMIS 184
N + + G A V + S+G +PD I+YN E GL+ +M +
Sbjct: 472 NTMFSALWNCGDRVRALQMVSEMVSKGIDPDGITYNSLISCLCRDGMVNEAIGLLVDMET 531
Query: 183 NGCGPNVVTYSILINSLCQDGKVDMAVDVLKDMMKSGLVPDTYSYDPVI 37
G P V++Y+I++ LC+ ++ A++VL M++ G P+ +Y +I
Sbjct: 532 GGFQPTVISYNIVLLGLCKTRRIVDAIEVLAAMVEKGCRPNETTYTLLI 580
Score = 85.5 bits (210), Expect = 1e-14
Identities = 47/175 (26%), Positives = 83/175 (47%), Gaps = 34/175 (19%)
Frame = -3
Query: 423 AMKLLDEMSSKGLR----------------------------------PDMYTYNVIIRG 346
A+ L+ M +KG + PD+++YN +I G
Sbjct: 138 ALYFLELMVNKGYKPDVILCTKLIKGFFNSRNVEKAVRVMQILEKYGEPDLFSYNALISG 197
Query: 345 MCKEGMVDEAYAFVRSLPSRGCNPDVISYNIXXXXXXXXXRWKEGEGLISEMISNGCGPN 166
CK +D A + + S+G +PDV++YNI + ++ +++ + C P
Sbjct: 198 FCKANRIDAANKVLDRMRSQGFSPDVVTYNIMIGSLCGRGKLGLALKVLDQLVKDNCRPT 257
Query: 165 VVTYSILINSLCQDGKVDMAVDVLKDMMKSGLVPDTYSYDPVISAFCKEGRLEVA 1
V+TY+ILI + +G +D A+ +L M+ GL PD ++Y+ V+ C+EG L+ A
Sbjct: 258 VITYTILIEATIPEGGIDEAMKLLDXMLSRGLKPDMHTYNAVVRGMCREGMLDRA 312
>ref|XP_012492771.1| PREDICTED: pentatricopeptide repeat-containing protein At3g04760,
chloroplastic [Gossypium raimondii]
gi|763777727|gb|KJB44850.1| hypothetical protein
B456_007G275900 [Gossypium raimondii]
Length = 588
Score = 243 bits (621), Expect = 3e-62
Identities = 119/181 (65%), Positives = 142/181 (78%)
Frame = -3
Query: 543 GKLGSALKALDQLLEDNCTPTVVTYTILIEATITERGTQSAMKLLDEMSSKGLRPDMYTY 364
GKL SA K L+QLL+DNC P+V+TYTILIEATI + G AMKLLDEM + GLRPDM+TY
Sbjct: 192 GKLDSAYKVLNQLLKDNCKPSVITYTILIEATILQGGINEAMKLLDEMLANGLRPDMFTY 251
Query: 363 NVIIRGMCKEGMVDEAYAFVRSLPSRGCNPDVISYNIXXXXXXXXXRWKEGEGLISEMIS 184
N IIRGMCK+GMV A+ FVR L +RGC PDVISYNI +W EGE L++EM+S
Sbjct: 252 NAIIRGMCKDGMVGRAFEFVRGLNARGCQPDVISYNILLRALLNQGKWIEGEKLVTEMVS 311
Query: 183 NGCGPNVVTYSILINSLCQDGKVDMAVDVLKDMMKSGLVPDTYSYDPVISAFCKEGRLEV 4
GC PNVVTYSILI+ LC++GKV+ AV+VLK M + GL PD YSYDP+ISAFCKE RL++
Sbjct: 312 RGCEPNVVTYSILISCLCREGKVEEAVNVLKMMKERGLTPDAYSYDPLISAFCKERRLDL 371
Query: 3 A 1
A
Sbjct: 372 A 372
Score = 116 bits (290), Expect = 7e-24
Identities = 65/181 (35%), Positives = 94/181 (51%)
Frame = -3
Query: 543 GKLGSALKALDQLLEDNCTPTVVTYTILIEATITERGTQSAMKLLDEMSSKGLRPDMYTY 364
GK+ A+ L + E TP +Y LI A ER A++ LD M S G PD+ Y
Sbjct: 332 GKVEEAVNVLKMMKERGLTPDAYSYDPLISAFCKERRLDLAIQFLDYMISDGCLPDIVNY 391
Query: 363 NVIIRGMCKEGMVDEAYAFVRSLPSRGCNPDVISYNIXXXXXXXXXRWKEGEGLISEMIS 184
N I+ +CK G D+A L GC P+V SYN + +I EM++
Sbjct: 392 NTILSTLCKNGKADQALEIFEKLSEVGCPPNVSSYNTMFTALWSTGDKFKALEMILEMLN 451
Query: 183 NGCGPNVVTYSILINSLCQDGKVDMAVDVLKDMMKSGLVPDTYSYDPVISAFCKEGRLEV 4
GP+ +TY+ LI+ LC+DG VD A+++L DM +S + P SY+ V+ CK R++
Sbjct: 452 KRIGPDEITYNSLISCLCRDGMVDEAIELLIDMGRSKIQPTVISYNIVLLGLCKVHRIDD 511
Query: 3 A 1
A
Sbjct: 512 A 512
Score = 107 bits (266), Expect = 4e-21
Identities = 54/166 (32%), Positives = 83/166 (50%)
Frame = -3
Query: 510 QLLEDNCTPTVVTYTILIEATITERGTQSAMKLLDEMSSKGLRPDMYTYNVIIRGMCKEG 331
++LE P V Y LI A K+LD M S+G PD+ TYN++I +C G
Sbjct: 133 EMLETYGEPDVFAYNALISGFCKMNRLDFANKVLDRMRSRGFSPDVVTYNIMIGSLCSRG 192
Query: 330 MVDEAYAFVRSLPSRGCNPDVISYNIXXXXXXXXXRWKEGEGLISEMISNGCGPNVVTYS 151
+D AY + L C P VI+Y I E L+ EM++NG P++ TY+
Sbjct: 193 KLDSAYKVLNQLLKDNCKPSVITYTILIEATILQGGINEAMKLLDEMLANGLRPDMFTYN 252
Query: 150 ILINSLCQDGKVDMAVDVLKDMMKSGLVPDTYSYDPVISAFCKEGR 13
+I +C+DG V A + ++ + G PD SY+ ++ A +G+
Sbjct: 253 AIIRGMCKDGMVGRAFEFVRGLNARGCQPDVISYNILLRALLNQGK 298
Score = 81.3 bits (199), Expect = 3e-13
Identities = 45/170 (26%), Positives = 80/170 (47%), Gaps = 34/170 (20%)
Frame = -3
Query: 423 AMKLLDEMSSKGLR----------------------------------PDMYTYNVIIRG 346
A L+ M KG + PD++ YN +I G
Sbjct: 93 AFYFLECMVGKGYKPDVVLCTKMIKGFFNGRNVEKAIRVMEMLETYGEPDVFAYNALISG 152
Query: 345 MCKEGMVDEAYAFVRSLPSRGCNPDVISYNIXXXXXXXXXRWKEGEGLISEMISNGCGPN 166
CK +D A + + SRG +PDV++YNI + ++++++ + C P+
Sbjct: 153 FCKMNRLDFANKVLDRMRSRGFSPDVVTYNIMIGSLCSRGKLDSAYKVLNQLLKDNCKPS 212
Query: 165 VVTYSILINSLCQDGKVDMAVDVLKDMMKSGLVPDTYSYDPVISAFCKEG 16
V+TY+ILI + G ++ A+ +L +M+ +GL PD ++Y+ +I CK+G
Sbjct: 213 VITYTILIEATILQGGINEAMKLLDEMLANGLRPDMFTYNAIIRGMCKDG 262
Score = 80.5 bits (197), Expect = 4e-13
Identities = 48/164 (29%), Positives = 80/164 (48%), Gaps = 1/164 (0%)
Frame = -3
Query: 543 GKLGSALKALDQLLEDNCTPTVVTYTILIEATITERGTQSAMKLLDEMSSKGLRPDMYTY 364
GK AL+ ++L E C P V +Y + A + A++++ EM +K + PD TY
Sbjct: 402 GKADQALEIFEKLSEVGCPPNVSSYNTMFTALWSTGDKFKALEMILEMLNKRIGPDEITY 461
Query: 363 NVIIRGMCKEGMVDEAYAFVRSLPSRGCNPDVISYNIXXXXXXXXXRWKEGEGLISEMIS 184
N +I +C++GMVDEA + + P VISYNI R + +++ M+
Sbjct: 462 NSLISCLCRDGMVDEAIELLIDMGRSKIQPTVISYNIVLLGLCKVHRIDDAIEVLAAMVE 521
Query: 183 NGCGPNVVTYSILINSLCQDGKVDMAVDVLKDMMK-SGLVPDTY 55
GC PN TY +L + G A+++ + + + DT+
Sbjct: 522 KGCQPNETTYVLLTEGIGFAGWRSQAMELANALFRMEAISEDTF 565
Score = 56.6 bits (135), Expect = 7e-06
Identities = 32/119 (26%), Positives = 56/119 (47%)
Frame = -3
Query: 357 IIRGMCKEGMVDEAYAFVRSLPSRGCNPDVISYNIXXXXXXXXXRWKEGEGLISEMISNG 178
++ CK G EA+ F+ + +G PDV+ ++ ++ EM+
Sbjct: 80 LLNRSCKSGKYHEAFYFLECMVGKGYKPDVVLCTKMIKGFFNGRNVEKAIRVM-EMLETY 138
Query: 177 CGPNVVTYSILINSLCQDGKVDMAVDVLKDMMKSGLVPDTYSYDPVISAFCKEGRLEVA 1
P+V Y+ LI+ C+ ++D A VL M G PD +Y+ +I + C G+L+ A
Sbjct: 139 GEPDVFAYNALISGFCKMNRLDFANKVLDRMRSRGFSPDVVTYNIMIGSLCSRGKLDSA 197
>ref|XP_010102224.1| hypothetical protein L484_024505 [Morus notabilis]
gi|587904971|gb|EXB93167.1| hypothetical protein
L484_024505 [Morus notabilis]
Length = 587
Score = 243 bits (619), Expect = 5e-62
Identities = 112/181 (61%), Positives = 146/181 (80%)
Frame = -3
Query: 543 GKLGSALKALDQLLEDNCTPTVVTYTILIEATITERGTQSAMKLLDEMSSKGLRPDMYTY 364
GK+ A K LD+LL DNC P+V+TYTILIEATI+E G AM++L+EM S+GL PDM+TY
Sbjct: 191 GKVDMAFKVLDELLRDNCKPSVITYTILIEATISEGGVDKAMEVLEEMLSRGLLPDMFTY 250
Query: 363 NVIIRGMCKEGMVDEAYAFVRSLPSRGCNPDVISYNIXXXXXXXXXRWKEGEGLISEMIS 184
N I+RGMC+EGM+D A+ FVRSL ++GC+P+VISYNI +W +GE ++S+M+S
Sbjct: 251 NAIVRGMCREGMLDRAFEFVRSLEAKGCSPNVISYNILLRALLNRGKWSDGEKILSDMVS 310
Query: 183 NGCGPNVVTYSILINSLCQDGKVDMAVDVLKDMMKSGLVPDTYSYDPVISAFCKEGRLEV 4
GC PNVVTYSILI++LC+DGKV+ AV+VLK M + G+ PD YSYDP+ISAFCKEGRL++
Sbjct: 311 RGCEPNVVTYSILISTLCRDGKVEDAVNVLKAMKEKGITPDAYSYDPLISAFCKEGRLDL 370
Query: 3 A 1
A
Sbjct: 371 A 371
Score = 104 bits (260), Expect = 2e-20
Identities = 61/181 (33%), Positives = 87/181 (48%)
Frame = -3
Query: 543 GKLGSALKALDQLLEDNCTPTVVTYTILIEATITERGTQSAMKLLDEMSSKGLRPDMYTY 364
GK+ A+ L + E TP +Y LI A E A++ +D M S G PD+ Y
Sbjct: 331 GKVEDAVNVLKAMKEKGITPDAYSYDPLISAFCKEGRLDLAIEFMDYMISDGSLPDIVNY 390
Query: 363 NVIIRGMCKEGMVDEAYAFVRSLPSRGCNPDVISYNIXXXXXXXXXRWKEGEGLISEMIS 184
N I+ +CK G D A L GC P V SYN + +ISEM+S
Sbjct: 391 NTILAALCKNGNADHALEIFEKLGEVGCPPTVSSYNTMFSALWNCGERIKALEMISEMVS 450
Query: 183 NGCGPNVVTYSILINSLCQDGKVDMAVDVLKDMMKSGLVPDTYSYDPVISAFCKEGRLEV 4
P+ +TY+ LI+ LC++G V+ A+ +L DM G SY+ V+ CK R++
Sbjct: 451 KRINPDEITYNSLISCLCREGMVNEAIGLLIDMEAGGFKLSVISYNIVLLGLCKARRIDD 510
Query: 3 A 1
A
Sbjct: 511 A 511
Score = 89.0 bits (219), Expect = 1e-15
Identities = 49/175 (28%), Positives = 86/175 (49%), Gaps = 34/175 (19%)
Frame = -3
Query: 423 AMKLLDEMSSKGLR----------------------------------PDMYTYNVIIRG 346
A+ L+ M SKG + PD+++YN +I G
Sbjct: 92 ALYFLELMVSKGFKPDVILCTKVMRGFFNSRNIPKAIRVMEILEKHGEPDLFSYNAMISG 151
Query: 345 MCKEGMVDEAYAFVRSLPSRGCNPDVISYNIXXXXXXXXXRWKEGEGLISEMISNGCGPN 166
CK V+ A + + +G +PD I+YNI + ++ E++ + C P+
Sbjct: 152 FCKANRVELANKVLDRMRVQGFSPDTITYNIMIGSLCSRGKVDMAFKVLDELLRDNCKPS 211
Query: 165 VVTYSILINSLCQDGKVDMAVDVLKDMMKSGLVPDTYSYDPVISAFCKEGRLEVA 1
V+TY+ILI + +G VD A++VL++M+ GL+PD ++Y+ ++ C+EG L+ A
Sbjct: 212 VITYTILIEATISEGGVDKAMEVLEEMLSRGLLPDMFTYNAIVRGMCREGMLDRA 266
Score = 84.3 bits (207), Expect = 3e-14
Identities = 47/137 (34%), Positives = 71/137 (51%)
Frame = -3
Query: 543 GKLGSALKALDQLLEDNCTPTVVTYTILIEATITERGTQSAMKLLDEMSSKGLRPDMYTY 364
G AL+ ++L E C PTV +Y + A A++++ EM SK + PD TY
Sbjct: 401 GNADHALEIFEKLGEVGCPPTVSSYNTMFSALWNCGERIKALEMISEMVSKRINPDEITY 460
Query: 363 NVIIRGMCKEGMVDEAYAFVRSLPSRGCNPDVISYNIXXXXXXXXXRWKEGEGLISEMIS 184
N +I +C+EGMV+EA + + + G VISYNI R + L++ M+
Sbjct: 461 NSLISCLCREGMVNEAIGLLIDMEAGGFKLSVISYNIVLLGLCKARRIDDAIELLAAMVE 520
Query: 183 NGCGPNVVTYSILINSL 133
GC PN TY++LI +
Sbjct: 521 KGCRPNETTYTLLIEGI 537
>ref|XP_010523366.1| PREDICTED: pentatricopeptide repeat-containing protein At3g04760,
chloroplastic isoform X1 [Tarenaya hassleriana]
Length = 590
Score = 243 bits (619), Expect = 5e-62
Identities = 115/181 (63%), Positives = 143/181 (79%)
Frame = -3
Query: 543 GKLGSALKALDQLLEDNCTPTVVTYTILIEATITERGTQSAMKLLDEMSSKGLRPDMYTY 364
GKL ALK LDQLL DNC PTV+TYTILIEAT + G A+KLLDEM S+GL+PDM+TY
Sbjct: 197 GKLDLALKVLDQLLMDNCRPTVITYTILIEATTMDGGVDEALKLLDEMLSRGLKPDMFTY 256
Query: 363 NVIIRGMCKEGMVDEAYAFVRSLPSRGCNPDVISYNIXXXXXXXXXRWKEGEGLISEMIS 184
N I+RGMCKEGMVD A+ VR+L SRGC PDVISYNI +W EG+ L+++M S
Sbjct: 257 NTIMRGMCKEGMVDRAFGMVRNLESRGCEPDVISYNILLRALLNQGKWDEGDKLMTKMFS 316
Query: 183 NGCGPNVVTYSILINSLCQDGKVDMAVDVLKDMMKSGLVPDTYSYDPVISAFCKEGRLEV 4
GC PNVVTYSILI++LC+DGK++ A+++LK+M GL PD YSYDP+I+AFC+EGRL++
Sbjct: 317 KGCEPNVVTYSILISTLCRDGKIEEALNLLKEMRGKGLNPDAYSYDPLIAAFCREGRLDL 376
Query: 3 A 1
A
Sbjct: 377 A 377
Score = 109 bits (273), Expect = 7e-22
Identities = 66/216 (30%), Positives = 98/216 (45%), Gaps = 35/216 (16%)
Frame = -3
Query: 543 GKLGSALKALDQLLEDNCTPTVVTYTILIEATITERGTQSAMKLLDEMSSKGLRPDMYTY 364
GK K + ++ C P VVTY+ILI + + A+ LL EM KGL PD Y+Y
Sbjct: 302 GKWDEGDKLMTKMFSKGCEPNVVTYSILISTLCRDGKIEEALNLLKEMRGKGLNPDAYSY 361
Query: 363 NVIIRGMCKEGMVDEAYAFVRSLPSRGCNPD----------------------------- 271
+ +I C+EG +D A F+ S+ S GC PD
Sbjct: 362 DPLIAAFCREGRLDLAIKFLESMISDGCLPDIVNYNTVLATLCKNGKADQALEIFGKLSE 421
Query: 270 ------VISYNIXXXXXXXXXRWKEGEGLISEMISNGCGPNVVTYSILINSLCQDGKVDM 109
SYN +ISEMIS+ P+ +TY+ +I+ +C+DG VD
Sbjct: 422 VGCPPNASSYNTMFSALWSSGNKARALQMISEMISHDIDPDEITYNSMISCMCRDGMVDD 481
Query: 108 AVDVLKDMMKSGLVPDTYSYDPVISAFCKEGRLEVA 1
A+ ++ DM S P +Y+ ++ FCK R++ A
Sbjct: 482 ALGLVVDMRSSEFHPSVITYNIILLGFCKAHRVDEA 517
Score = 90.1 bits (222), Expect = 6e-16
Identities = 50/161 (31%), Positives = 81/161 (50%)
Frame = -3
Query: 543 GKLGSALKALDQLLEDNCTPTVVTYTILIEATITERGTQSAMKLLDEMSSKGLRPDMYTY 364
GK AL+ +L E C P +Y + A + A++++ EM S + PD TY
Sbjct: 407 GKADQALEIFGKLSEVGCPPNASSYNTMFSALWSSGNKARALQMISEMISHDIDPDEITY 466
Query: 363 NVIIRGMCKEGMVDEAYAFVRSLPSRGCNPDVISYNIXXXXXXXXXRWKEGEGLISEMIS 184
N +I MC++GMVD+A V + S +P VI+YNI R E +++ M+
Sbjct: 467 NSMISCMCRDGMVDDALGLVVDMRSSEFHPSVITYNIILLGFCKAHRVDEAIDILASMVE 526
Query: 183 NGCGPNVVTYSILINSLCQDGKVDMAVDVLKDMMKSGLVPD 61
GC PN T+++LI + G A+++ +++ G V D
Sbjct: 527 TGCRPNETTFTLLIEGIGFAGWRAEAMELANSLVRLGAVSD 567
Score = 86.3 bits (212), Expect = 8e-15
Identities = 46/170 (27%), Positives = 89/170 (52%), Gaps = 1/170 (0%)
Frame = -3
Query: 543 GKLGSALKALDQLLEDNCTPTVVTYTILIEATITERG-TQSAMKLLDEMSSKGLRPDMYT 367
G+L A+K L+ ++ D C P +V Y ++ AT+ + G A+++ ++S G P+ +
Sbjct: 372 GRLDLAIKFLESMISDGCLPDIVNYNTVL-ATLCKNGKADQALEIFGKLSEVGCPPNASS 430
Query: 366 YNVIIRGMCKEGMVDEAYAFVRSLPSRGCNPDVISYNIXXXXXXXXXRWKEGEGLISEMI 187
YN + + G A + + S +PD I+YN + GL+ +M
Sbjct: 431 YNTMFSALWSSGNKARALQMISEMISHDIDPDEITYNSMISCMCRDGMVDDALGLVVDMR 490
Query: 186 SNGCGPNVVTYSILINSLCQDGKVDMAVDVLKDMMKSGLVPDTYSYDPVI 37
S+ P+V+TY+I++ C+ +VD A+D+L M+++G P+ ++ +I
Sbjct: 491 SSEFHPSVITYNIILLGFCKAHRVDEAIDILASMVETGCRPNETTFTLLI 540
Score = 71.6 bits (174), Expect = 2e-10
Identities = 42/141 (29%), Positives = 71/141 (50%)
Frame = -3
Query: 423 AMKLLDEMSSKGLRPDMYTYNVIIRGMCKEGMVDEAYAFVRSLPSRGCNPDVISYNIXXX 244
++ LL++M KG +PD +I+G+ + +A + L + G PDV +YN
Sbjct: 98 SLYLLEKMVRKGYKPDAILCTKLIKGLFNLRNIPKAVKVMEILETHG-QPDVFAYNALIS 156
Query: 243 XXXXXXRWKEGEGLISEMISNGCGPNVVTYSILINSLCQDGKVDMAVDVLKDMMKSGLVP 64
R + +I M + G P+ VTY+I+I SLC GK+D+A+ VL ++ P
Sbjct: 157 GFCKMNRMDDATKVIDRMRNKGFSPDTVTYNIMIGSLCSRGKLDLALKVLDQLLMDNCRP 216
Query: 63 DTYSYDPVISAFCKEGRLEVA 1
+Y +I A +G ++ A
Sbjct: 217 TVITYTILIEATTMDGGVDEA 237
>ref|XP_002884468.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata] gi|297330308|gb|EFH60727.1|
pentatricopeptide repeat-containing protein [Arabidopsis
lyrata subsp. lyrata]
Length = 598
Score = 242 bits (618), Expect = 7e-62
Identities = 115/181 (63%), Positives = 142/181 (78%)
Frame = -3
Query: 543 GKLGSALKALDQLLEDNCTPTVVTYTILIEATITERGTQSAMKLLDEMSSKGLRPDMYTY 364
GKL ALK LDQLL DNC PTV+TYTILIEAT+ E G A+KLLDEM S+GL+PDM+TY
Sbjct: 203 GKLDLALKVLDQLLSDNCQPTVITYTILIEATMLEGGVDEALKLLDEMLSRGLKPDMFTY 262
Query: 363 NVIIRGMCKEGMVDEAYAFVRSLPSRGCNPDVISYNIXXXXXXXXXRWKEGEGLISEMIS 184
N IIRGMCKEGMVD A+ +R+L +GC PDVISYNI +W+EGE L+++M S
Sbjct: 263 NTIIRGMCKEGMVDRAFEMIRNLELKGCEPDVISYNILLRALLNQGKWEEGEKLMTKMFS 322
Query: 183 NGCGPNVVTYSILINSLCQDGKVDMAVDVLKDMMKSGLVPDTYSYDPVISAFCKEGRLEV 4
C PNVVTYSILI +LC+DGK++ A+++LK M + GL PD YSYDP+I+AFC+EGRL+V
Sbjct: 323 EKCDPNVVTYSILITTLCRDGKIEEAMNLLKLMKEKGLTPDAYSYDPLIAAFCREGRLDV 382
Query: 3 A 1
A
Sbjct: 383 A 383
Score = 110 bits (275), Expect = 4e-22
Identities = 63/186 (33%), Positives = 93/186 (50%), Gaps = 5/186 (2%)
Frame = -3
Query: 543 GKLGSALKALDQLLEDNCTPTVVTYTILIEATITERGTQSAMKLLDEMSSKGLRPDMYTY 364
GK+ A+ L + E TP +Y LI A E A++ L+ M S G PD+ Y
Sbjct: 343 GKIEEAMNLLKLMKEKGLTPDAYSYDPLIAAFCREGRLDVAIEFLETMISDGCLPDIVNY 402
Query: 363 NVIIRGMCKEGMVDEAYAFVRSLPSRGCNPDVISYNIXXXXXXXXXRWKEGE-----GLI 199
N ++ +CK G D+A L GC+P+ SYN W G+ +I
Sbjct: 403 NTVLATLCKNGKADQALEIFGKLGEVGCSPNSSSYN-----TMFSALWSSGDKIRALHMI 457
Query: 198 SEMISNGCGPNVVTYSILINSLCQDGKVDMAVDVLKDMMKSGLVPDTYSYDPVISAFCKE 19
EM+SNG P+ +TY+ +I+ LC++G VD A ++L DM P +Y+ V+ FCK
Sbjct: 458 LEMVSNGIDPDEITYNSMISCLCREGMVDKAFELLVDMRSCEFHPSVVTYNIVLLGFCKA 517
Query: 18 GRLEVA 1
R+E A
Sbjct: 518 HRIEDA 523
Score = 102 bits (255), Expect = 8e-20
Identities = 54/168 (32%), Positives = 84/168 (50%)
Frame = -3
Query: 510 QLLEDNCTPTVVTYTILIEATITERGTQSAMKLLDEMSSKGLRPDMYTYNVIIRGMCKEG 331
++LE P V Y LI A ++LD M SK PD TYN++I +C G
Sbjct: 144 EILEKFGQPDVFAYNALINGFCKMNRIDDATRVLDRMRSKDFSPDTVTYNIMIGSLCSRG 203
Query: 330 MVDEAYAFVRSLPSRGCNPDVISYNIXXXXXXXXXRWKEGEGLISEMISNGCGPNVVTYS 151
+D A + L S C P VI+Y I E L+ EM+S G P++ TY+
Sbjct: 204 KLDLALKVLDQLLSDNCQPTVITYTILIEATMLEGGVDEALKLLDEMLSRGLKPDMFTYN 263
Query: 150 ILINSLCQDGKVDMAVDVLKDMMKSGLVPDTYSYDPVISAFCKEGRLE 7
+I +C++G VD A ++++++ G PD SY+ ++ A +G+ E
Sbjct: 264 TIIRGMCKEGMVDRAFEMIRNLELKGCEPDVISYNILLRALLNQGKWE 311
Score = 89.7 bits (221), Expect = 7e-16
Identities = 50/165 (30%), Positives = 87/165 (52%)
Frame = -3
Query: 543 GKLGSALKALDQLLEDNCTPTVVTYTILIEATITERGTQSAMKLLDEMSSKGLRPDMYTY 364
GK AL+ +L E C+P +Y + A + A+ ++ EM S G+ PD TY
Sbjct: 413 GKADQALEIFGKLGEVGCSPNSSSYNTMFSALWSSGDKIRALHMILEMVSNGIDPDEITY 472
Query: 363 NVIIRGMCKEGMVDEAYAFVRSLPSRGCNPDVISYNIXXXXXXXXXRWKEGEGLISEMIS 184
N +I +C+EGMVD+A+ + + S +P V++YNI R ++ ++ M+
Sbjct: 473 NSMISCLCREGMVDKAFELLVDMRSCEFHPSVVTYNIVLLGFCKAHRIEDAIDVLDSMVG 532
Query: 183 NGCGPNVVTYSILINSLCQDGKVDMAVDVLKDMMKSGLVPDTYSY 49
NGC PN TY++LI + G A+++ D+++ + + YS+
Sbjct: 533 NGCRPNETTYTVLIEGIGFAGYRAEAMELANDLVRINAISE-YSF 576
Score = 89.4 bits (220), Expect = 1e-15
Identities = 62/239 (25%), Positives = 97/239 (40%), Gaps = 70/239 (29%)
Frame = -3
Query: 543 GKLGSALKALDQLLEDNCTPTVVTYTILIEATITERGTQSAMKLLDEMSSKGLRPDMYTY 364
GK K + ++ + C P VVTY+ILI + + AM LL M KGL PD Y+Y
Sbjct: 308 GKWEEGEKLMTKMFSEKCDPNVVTYSILITTLCRDGKIEEAMNLLKLMKEKGLTPDAYSY 367
Query: 363 NVIIRGMCKEGMVDEAYAFVRSLPSRGCNPDVISY------------------------- 259
+ +I C+EG +D A F+ ++ S GC PD+++Y
Sbjct: 368 DPLIAAFCREGRLDVAIEFLETMISDGCLPDIVNYNTVLATLCKNGKADQALEIFGKLGE 427
Query: 258 -----NIXXXXXXXXXRWKEGEGL-----ISEMISNGCGPN------------------- 166
N W G+ + I EM+SNG P+
Sbjct: 428 VGCSPNSSSYNTMFSALWSSGDKIRALHMILEMVSNGIDPDEITYNSMISCLCREGMVDK 487
Query: 165 ----------------VVTYSILINSLCQDGKVDMAVDVLKDMMKSGLVPDTYSYDPVI 37
VVTY+I++ C+ +++ A+DVL M+ +G P+ +Y +I
Sbjct: 488 AFELLVDMRSCEFHPSVVTYNIVLLGFCKAHRIEDAIDVLDSMVGNGCRPNETTYTVLI 546
Score = 85.5 bits (210), Expect = 1e-14
Identities = 47/175 (26%), Positives = 83/175 (47%), Gaps = 34/175 (19%)
Frame = -3
Query: 423 AMKLLDEMSSKGL----------------------------------RPDMYTYNVIIRG 346
++ LL+ M KG +PD++ YN +I G
Sbjct: 104 SLHLLETMVRKGYNPDVILCTKLIKGFFTLRNVPKAVRVMEILEKFGQPDVFAYNALING 163
Query: 345 MCKEGMVDEAYAFVRSLPSRGCNPDVISYNIXXXXXXXXXRWKEGEGLISEMISNGCGPN 166
CK +D+A + + S+ +PD ++YNI + ++ +++S+ C P
Sbjct: 164 FCKMNRIDDATRVLDRMRSKDFSPDTVTYNIMIGSLCSRGKLDLALKVLDQLLSDNCQPT 223
Query: 165 VVTYSILINSLCQDGKVDMAVDVLKDMMKSGLVPDTYSYDPVISAFCKEGRLEVA 1
V+TY+ILI + +G VD A+ +L +M+ GL PD ++Y+ +I CKEG ++ A
Sbjct: 224 VITYTILIEATMLEGGVDEALKLLDEMLSRGLKPDMFTYNTIIRGMCKEGMVDRA 278
>gb|KFK37890.1| hypothetical protein AALP_AA3G042500 [Arabis alpina]
Length = 489
Score = 242 bits (617), Expect = 9e-62
Identities = 116/181 (64%), Positives = 142/181 (78%)
Frame = -3
Query: 543 GKLGSALKALDQLLEDNCTPTVVTYTILIEATITERGTQSAMKLLDEMSSKGLRPDMYTY 364
GKL A+K LDQLL DNC PTV+TYTILIEAT+ + G A+KLLDEM S+GL+PDM+TY
Sbjct: 93 GKLDLAMKVLDQLLNDNCQPTVITYTILIEATMLDGGVDEALKLLDEMLSRGLKPDMFTY 152
Query: 363 NVIIRGMCKEGMVDEAYAFVRSLPSRGCNPDVISYNIXXXXXXXXXRWKEGEGLISEMIS 184
N IIRGMCKEGMV A+ VR+L RGC PDVISYNI +W+EGE L+S+MIS
Sbjct: 153 NTIIRGMCKEGMVHRAFEMVRNLELRGCEPDVISYNILLRAVLNQGKWEEGEKLMSKMIS 212
Query: 183 NGCGPNVVTYSILINSLCQDGKVDMAVDVLKDMMKSGLVPDTYSYDPVISAFCKEGRLEV 4
C PNVVTYSILI +LC+DGK+D A+++LK M + GL PD YSYDP+I+AFC+EGRL++
Sbjct: 213 EKCEPNVVTYSILITTLCRDGKIDEALNLLKLMKEKGLTPDAYSYDPLIAAFCREGRLDL 272
Query: 3 A 1
A
Sbjct: 273 A 273
Score = 119 bits (297), Expect = 1e-24
Identities = 67/216 (31%), Positives = 104/216 (48%), Gaps = 35/216 (16%)
Frame = -3
Query: 543 GKLGSALKALDQLLEDNCTPTVVTYTILIEATITERGTQSAMKLLDEMSSKGLRPDMYTY 364
GK K + +++ + C P VVTY+ILI + A+ LL M KGL PD Y+Y
Sbjct: 198 GKWEEGEKLMSKMISEKCEPNVVTYSILITTLCRDGKIDEALNLLKLMKEKGLTPDAYSY 257
Query: 363 NVIIRGMCKEGMVDEAYAFVRSLPSRGCNPDVISYNIXXXXXXXXXR------------- 223
+ +I C+EG +D A F+ ++ S GC PD+++YN +
Sbjct: 258 DPLIAAFCREGRLDLAIEFLETMISEGCLPDIVNYNTVLATLCKNGKADQALEIFGKLGE 317
Query: 222 -----------------WKEGEGL-----ISEMISNGCGPNVVTYSILINSLCQDGKVDM 109
W G+ + ISEM++NG P+ +TY+ +I+ LC++G VD
Sbjct: 318 VGCSPNSSSYNTMFSALWSSGDKMRGLQMISEMLNNGIDPDEITYNSMISCLCREGMVDE 377
Query: 108 AVDVLKDMMKSGLVPDTYSYDPVISAFCKEGRLEVA 1
A ++L DM P +Y+ V+ FCK R+E A
Sbjct: 378 AFELLVDMRSCEFHPSVVTYNIVVLGFCKAHRIEDA 413
Score = 101 bits (252), Expect = 2e-19
Identities = 54/168 (32%), Positives = 84/168 (50%)
Frame = -3
Query: 510 QLLEDNCTPTVVTYTILIEATITERGTQSAMKLLDEMSSKGLRPDMYTYNVIIRGMCKEG 331
++LE P V Y LI A K+LD M SKG PD TYN++I +C G
Sbjct: 34 EILEKFGQPDVFAYNALINGFCKMNRIDDATKVLDRMRSKGFSPDTVTYNIMIGSLCSRG 93
Query: 330 MVDEAYAFVRSLPSRGCNPDVISYNIXXXXXXXXXRWKEGEGLISEMISNGCGPNVVTYS 151
+D A + L + C P VI+Y I E L+ EM+S G P++ TY+
Sbjct: 94 KLDLAMKVLDQLLNDNCQPTVITYTILIEATMLDGGVDEALKLLDEMLSRGLKPDMFTYN 153
Query: 150 ILINSLCQDGKVDMAVDVLKDMMKSGLVPDTYSYDPVISAFCKEGRLE 7
+I +C++G V A ++++++ G PD SY+ ++ A +G+ E
Sbjct: 154 TIIRGMCKEGMVHRAFEMVRNLELRGCEPDVISYNILLRAVLNQGKWE 201
Score = 90.9 bits (224), Expect = 3e-16
Identities = 48/165 (29%), Positives = 87/165 (52%)
Frame = -3
Query: 543 GKLGSALKALDQLLEDNCTPTVVTYTILIEATITERGTQSAMKLLDEMSSKGLRPDMYTY 364
GK AL+ +L E C+P +Y + A + ++++ EM + G+ PD TY
Sbjct: 303 GKADQALEIFGKLGEVGCSPNSSSYNTMFSALWSSGDKMRGLQMISEMLNNGIDPDEITY 362
Query: 363 NVIIRGMCKEGMVDEAYAFVRSLPSRGCNPDVISYNIXXXXXXXXXRWKEGEGLISEMIS 184
N +I +C+EGMVDEA+ + + S +P V++YNI R ++ ++ M+
Sbjct: 363 NSMISCLCREGMVDEAFELLVDMRSCEFHPSVVTYNIVVLGFCKAHRIEDAIDVLESMVE 422
Query: 183 NGCGPNVVTYSILINSLCQDGKVDMAVDVLKDMMKSGLVPDTYSY 49
NGC PN TY+++I + G A+++ D+++ + + YS+
Sbjct: 423 NGCRPNETTYTVIIEGIGFAGYRAEAMELANDLVRIDAISE-YSF 466
>ref|XP_010485860.1| PREDICTED: pentatricopeptide repeat-containing protein At3g04760,
chloroplastic-like [Camelina sativa]
Length = 610
Score = 241 bits (615), Expect = 2e-61
Identities = 116/181 (64%), Positives = 142/181 (78%)
Frame = -3
Query: 543 GKLGSALKALDQLLEDNCTPTVVTYTILIEATITERGTQSAMKLLDEMSSKGLRPDMYTY 364
GKL ALK LDQLL DNC PTV+TYTILIEAT+ E G A+KLLDEM S+GL+PDM+TY
Sbjct: 214 GKLVLALKVLDQLLSDNCQPTVITYTILIEATMLEGGVDEALKLLDEMLSRGLKPDMFTY 273
Query: 363 NVIIRGMCKEGMVDEAYAFVRSLPSRGCNPDVISYNIXXXXXXXXXRWKEGEGLISEMIS 184
N IIRGMCKEGMVD A+ VR+L RGC PDVISYNI +W+EGE L+++M S
Sbjct: 274 NTIIRGMCKEGMVDRAFEMVRNLELRGCEPDVISYNILLRALLNQGKWEEGEKLMTKMFS 333
Query: 183 NGCGPNVVTYSILINSLCQDGKVDMAVDVLKDMMKSGLVPDTYSYDPVISAFCKEGRLEV 4
C PNVVTYSILI +LC+DGK++ A+++LK M + GL PD YSYDP+I+AFC+EGRL++
Sbjct: 334 EKCDPNVVTYSILITTLCRDGKIEEALNLLKLMKEKGLSPDAYSYDPLIAAFCREGRLDL 393
Query: 3 A 1
A
Sbjct: 394 A 394
Score = 115 bits (287), Expect = 2e-23
Identities = 56/181 (30%), Positives = 97/181 (53%)
Frame = -3
Query: 543 GKLGSALKALDQLLEDNCTPTVVTYTILIEATITERGTQSAMKLLDEMSSKGLRPDMYTY 364
GK K + ++ + C P VVTY+ILI + + A+ LL M KGL PD Y+Y
Sbjct: 319 GKWEEGEKLMTKMFSEKCDPNVVTYSILITTLCRDGKIEEALNLLKLMKEKGLSPDAYSY 378
Query: 363 NVIIRGMCKEGMVDEAYAFVRSLPSRGCNPDVISYNIXXXXXXXXXRWKEGEGLISEMIS 184
+ +I C+EG +D A F+ ++ S GC PD+++YN + + + ++
Sbjct: 379 DPLIAAFCREGRLDLAIEFLETMISDGCLPDIVNYNTVLATLCKNGKADQALEIFGKLGE 438
Query: 183 NGCGPNVVTYSILINSLCQDGKVDMAVDVLKDMMKSGLVPDTYSYDPVISAFCKEGRLEV 4
GC PN +Y+ + ++L G A+ ++ +M+ G+ PD +Y+ +IS C+EG ++
Sbjct: 439 VGCSPNSSSYNTMFSALWSSGDKIRALHMISEMVTHGIDPDEITYNSMISCLCREGMVDE 498
Query: 3 A 1
A
Sbjct: 499 A 499
Score = 107 bits (268), Expect = 3e-21
Identities = 61/183 (33%), Positives = 92/183 (50%), Gaps = 5/183 (2%)
Frame = -3
Query: 543 GKLGSALKALDQLLEDNCTPTVVTYTILIEATITERGTQSAMKLLDEMSSKGLRPDMYTY 364
GK+ AL L + E +P +Y LI A E A++ L+ M S G PD+ Y
Sbjct: 354 GKIEEALNLLKLMKEKGLSPDAYSYDPLIAAFCREGRLDLAIEFLETMISDGCLPDIVNY 413
Query: 363 NVIIRGMCKEGMVDEAYAFVRSLPSRGCNPDVISYNIXXXXXXXXXRWKEGE-----GLI 199
N ++ +CK G D+A L GC+P+ SYN W G+ +I
Sbjct: 414 NTVLATLCKNGKADQALEIFGKLGEVGCSPNSSSYN-----TMFSALWSSGDKIRALHMI 468
Query: 198 SEMISNGCGPNVVTYSILINSLCQDGKVDMAVDVLKDMMKSGLVPDTYSYDPVISAFCKE 19
SEM+++G P+ +TY+ +I+ LC++G VD A D+L DM P +Y+ V+ FCK
Sbjct: 469 SEMVTHGIDPDEITYNSMISCLCREGMVDEAYDLLVDMRSCEFHPSVVTYNIVLLGFCKT 528
Query: 18 GRL 10
R+
Sbjct: 529 HRI 531
Score = 89.0 bits (219), Expect = 1e-15
Identities = 48/175 (27%), Positives = 84/175 (48%), Gaps = 34/175 (19%)
Frame = -3
Query: 423 AMKLLDEMSSKGL----------------------------------RPDMYTYNVIIRG 346
++ LL+ M KG +PD++ YN +I G
Sbjct: 115 SLHLLESMVRKGYNPDVILCTKLIKGFFTLRNIPKAVRVMEILEKFGQPDVFAYNALING 174
Query: 345 MCKEGMVDEAYAFVRSLPSRGCNPDVISYNIXXXXXXXXXRWKEGEGLISEMISNGCGPN 166
CK +D+A + + S+G +PD ++YNI + ++ +++S+ C P
Sbjct: 175 FCKMNRIDDATRVLNRMRSKGFSPDTVTYNIMIGSLCSRGKLVLALKVLDQLLSDNCQPT 234
Query: 165 VVTYSILINSLCQDGKVDMAVDVLKDMMKSGLVPDTYSYDPVISAFCKEGRLEVA 1
V+TY+ILI + +G VD A+ +L +M+ GL PD ++Y+ +I CKEG ++ A
Sbjct: 235 VITYTILIEATMLEGGVDEALKLLDEMLSRGLKPDMFTYNTIIRGMCKEGMVDRA 289
Score = 88.2 bits (217), Expect = 2e-15
Identities = 51/165 (30%), Positives = 85/165 (51%)
Frame = -3
Query: 543 GKLGSALKALDQLLEDNCTPTVVTYTILIEATITERGTQSAMKLLDEMSSKGLRPDMYTY 364
GK AL+ +L E C+P +Y + A + A+ ++ EM + G+ PD TY
Sbjct: 424 GKADQALEIFGKLGEVGCSPNSSSYNTMFSALWSSGDKIRALHMISEMVTHGIDPDEITY 483
Query: 363 NVIIRGMCKEGMVDEAYAFVRSLPSRGCNPDVISYNIXXXXXXXXXRWKEGEGLISEMIS 184
N +I +C+EGMVDEAY + + S +P V++YNI R + ++ M+
Sbjct: 484 NSMISCLCREGMVDEAYDLLVDMRSCEFHPSVVTYNIVLLGFCKTHRIVDAIDVLESMVG 543
Query: 183 NGCGPNVVTYSILINSLCQDGKVDMAVDVLKDMMKSGLVPDTYSY 49
NGC PN T ++LI + G A+++ D+++ + D YS+
Sbjct: 544 NGCRPNESTSAVLIEGIGFAGYRAEAMELANDLVRIDAISD-YSF 587
Score = 56.2 bits (134), Expect = 9e-06
Identities = 34/119 (28%), Positives = 55/119 (46%)
Frame = -3
Query: 357 IIRGMCKEGMVDEAYAFVRSLPSRGCNPDVISYNIXXXXXXXXXRWKEGEGLISEMISNG 178
I C+ G E+ + S+ +G NPDVI + ++ E++
Sbjct: 102 IFHRSCRSGNYIESLHLLESMVRKGYNPDVILCTKLIKGFFTLRNIPKAVRVM-EILEKF 160
Query: 177 CGPNVVTYSILINSLCQDGKVDMAVDVLKDMMKSGLVPDTYSYDPVISAFCKEGRLEVA 1
P+V Y+ LIN C+ ++D A VL M G PDT +Y+ +I + C G+L +A
Sbjct: 161 GQPDVFAYNALINGFCKMNRIDDATRVLNRMRSKGFSPDTVTYNIMIGSLCSRGKLVLA 219
>ref|XP_010463963.1| PREDICTED: pentatricopeptide repeat-containing protein At3g04760,
chloroplastic-like [Camelina sativa]
Length = 603
Score = 241 bits (615), Expect = 2e-61
Identities = 116/181 (64%), Positives = 142/181 (78%)
Frame = -3
Query: 543 GKLGSALKALDQLLEDNCTPTVVTYTILIEATITERGTQSAMKLLDEMSSKGLRPDMYTY 364
GKL ALK LDQLL DNC PTV+TYTILIEAT+ E G A+KLLDEM S+GL+PDM+TY
Sbjct: 207 GKLVLALKVLDQLLSDNCQPTVITYTILIEATMLEGGVDEALKLLDEMLSRGLKPDMFTY 266
Query: 363 NVIIRGMCKEGMVDEAYAFVRSLPSRGCNPDVISYNIXXXXXXXXXRWKEGEGLISEMIS 184
N IIRGMCKEGMVD A+ VR+L RGC PDVISYNI +W+EGE L+++M S
Sbjct: 267 NTIIRGMCKEGMVDRAFEMVRNLELRGCEPDVISYNILLRALLNQGKWEEGEKLMTKMFS 326
Query: 183 NGCGPNVVTYSILINSLCQDGKVDMAVDVLKDMMKSGLVPDTYSYDPVISAFCKEGRLEV 4
C PNVVTYSILI +LC+DGK++ A+++LK M + GL PD YSYDP+I+AFC+EGRL++
Sbjct: 327 EKCDPNVVTYSILITTLCRDGKIEEALNLLKLMKEKGLSPDAYSYDPLIAAFCREGRLDL 386
Query: 3 A 1
A
Sbjct: 387 A 387
Score = 115 bits (287), Expect = 2e-23
Identities = 56/181 (30%), Positives = 97/181 (53%)
Frame = -3
Query: 543 GKLGSALKALDQLLEDNCTPTVVTYTILIEATITERGTQSAMKLLDEMSSKGLRPDMYTY 364
GK K + ++ + C P VVTY+ILI + + A+ LL M KGL PD Y+Y
Sbjct: 312 GKWEEGEKLMTKMFSEKCDPNVVTYSILITTLCRDGKIEEALNLLKLMKEKGLSPDAYSY 371
Query: 363 NVIIRGMCKEGMVDEAYAFVRSLPSRGCNPDVISYNIXXXXXXXXXRWKEGEGLISEMIS 184
+ +I C+EG +D A F+ ++ S GC PD+++YN + + + ++
Sbjct: 372 DPLIAAFCREGRLDLAIEFLETMISDGCLPDIVNYNTVLATLCKNGKADQALEIFGKLGE 431
Query: 183 NGCGPNVVTYSILINSLCQDGKVDMAVDVLKDMMKSGLVPDTYSYDPVISAFCKEGRLEV 4
GC PN +Y+ + ++L G A+ ++ +M+ G+ PD +Y+ +IS C+EG ++
Sbjct: 432 VGCSPNSSSYNTMFSALWSSGDKIRALHMISEMVTHGIDPDEITYNSMISCLCREGMVDE 491
Query: 3 A 1
A
Sbjct: 492 A 492
Score = 108 bits (269), Expect = 2e-21
Identities = 61/183 (33%), Positives = 92/183 (50%), Gaps = 5/183 (2%)
Frame = -3
Query: 543 GKLGSALKALDQLLEDNCTPTVVTYTILIEATITERGTQSAMKLLDEMSSKGLRPDMYTY 364
GK+ AL L + E +P +Y LI A E A++ L+ M S G PD+ Y
Sbjct: 347 GKIEEALNLLKLMKEKGLSPDAYSYDPLIAAFCREGRLDLAIEFLETMISDGCLPDIVNY 406
Query: 363 NVIIRGMCKEGMVDEAYAFVRSLPSRGCNPDVISYNIXXXXXXXXXRWKEGE-----GLI 199
N ++ +CK G D+A L GC+P+ SYN W G+ +I
Sbjct: 407 NTVLATLCKNGKADQALEIFGKLGEVGCSPNSSSYN-----TMFSALWSSGDKIRALHMI 461
Query: 198 SEMISNGCGPNVVTYSILINSLCQDGKVDMAVDVLKDMMKSGLVPDTYSYDPVISAFCKE 19
SEM+++G P+ +TY+ +I+ LC++G VD A D+L DM P +Y+ V+ FCK
Sbjct: 462 SEMVTHGIDPDEITYNSMISCLCREGMVDEAYDLLVDMRSCEFQPSVVTYNIVLLGFCKT 521
Query: 18 GRL 10
R+
Sbjct: 522 HRI 524
Score = 90.9 bits (224), Expect = 3e-16
Identities = 52/165 (31%), Positives = 85/165 (51%)
Frame = -3
Query: 543 GKLGSALKALDQLLEDNCTPTVVTYTILIEATITERGTQSAMKLLDEMSSKGLRPDMYTY 364
GK AL+ +L E C+P +Y + A + A+ ++ EM + G+ PD TY
Sbjct: 417 GKADQALEIFGKLGEVGCSPNSSSYNTMFSALWSSGDKIRALHMISEMVTHGIDPDEITY 476
Query: 363 NVIIRGMCKEGMVDEAYAFVRSLPSRGCNPDVISYNIXXXXXXXXXRWKEGEGLISEMIS 184
N +I +C+EGMVDEAY + + S P V++YNI R + ++ M+
Sbjct: 477 NSMISCLCREGMVDEAYDLLVDMRSCEFQPSVVTYNIVLLGFCKTHRIVDAIDVLESMVR 536
Query: 183 NGCGPNVVTYSILINSLCQDGKVDMAVDVLKDMMKSGLVPDTYSY 49
NGC PN TY++LI + G A+++ D+++ + D YS+
Sbjct: 537 NGCKPNESTYTVLIEGIGFAGYRAEAMELANDLVRIDAISD-YSF 580
Score = 56.6 bits (135), Expect = 7e-06
Identities = 42/153 (27%), Positives = 67/153 (43%), Gaps = 1/153 (0%)
Frame = -3
Query: 456 EATI-TERGTQSAMKLLDEMSSKGLRPDMYTYNVIIRGMCKEGMVDEAYAFVRSLPSRGC 280
+AT+ TER Q ++ D K I C+ G E+ + S+ +G
Sbjct: 72 DATVPTERRQQHSLGFRDTQMLK-----------IFHRSCRSGNYIESLHLLESMVRKGY 120
Query: 279 NPDVISYNIXXXXXXXXXRWKEGEGLISEMISNGCGPNVVTYSILINSLCQDGKVDMAVD 100
NPDVI + ++ E++ P+V Y+ LIN C+ ++D A
Sbjct: 121 NPDVILCTKLIKGFFTLRNIPKAVRVM-EILEKFGQPDVFAYNALINGFCKMNRIDDATR 179
Query: 99 VLKDMMKSGLVPDTYSYDPVISAFCKEGRLEVA 1
VL M G PDT +Y+ +I + C G+L +A
Sbjct: 180 VLDRMRSKGFSPDTVTYNIMIGSLCSRGKLVLA 212
>ref|XP_006296608.1| hypothetical protein CARUB_v10013258mg [Capsella rubella]
gi|482565317|gb|EOA29506.1| hypothetical protein
CARUB_v10013258mg [Capsella rubella]
Length = 607
Score = 241 bits (615), Expect = 2e-61
Identities = 116/181 (64%), Positives = 142/181 (78%)
Frame = -3
Query: 543 GKLGSALKALDQLLEDNCTPTVVTYTILIEATITERGTQSAMKLLDEMSSKGLRPDMYTY 364
GKL ALK LDQLL DNC PTV+TYTILIEAT+ E G A+KLLDEM S+GL+PDM+TY
Sbjct: 211 GKLVLALKVLDQLLSDNCQPTVITYTILIEATMLEGGVDEALKLLDEMLSRGLKPDMFTY 270
Query: 363 NVIIRGMCKEGMVDEAYAFVRSLPSRGCNPDVISYNIXXXXXXXXXRWKEGEGLISEMIS 184
N IIRGMCKEGMVD A+ VR+L RGC PDVISYNI +W+EGE L+++M S
Sbjct: 271 NTIIRGMCKEGMVDRAFEMVRNLELRGCEPDVISYNILLRALLNQGKWEEGEKLMTKMFS 330
Query: 183 NGCGPNVVTYSILINSLCQDGKVDMAVDVLKDMMKSGLVPDTYSYDPVISAFCKEGRLEV 4
C PNVVTYSILI +LC+DGK++ A+++LK M + GL PD YSYDP+I+AFC+EGRL++
Sbjct: 331 EKCDPNVVTYSILITTLCRDGKIEEALNLLKLMKEKGLSPDAYSYDPLIAAFCREGRLDL 390
Query: 3 A 1
A
Sbjct: 391 A 391
Score = 110 bits (276), Expect = 3e-22
Identities = 64/186 (34%), Positives = 93/186 (50%), Gaps = 5/186 (2%)
Frame = -3
Query: 543 GKLGSALKALDQLLEDNCTPTVVTYTILIEATITERGTQSAMKLLDEMSSKGLRPDMYTY 364
GK+ AL L + E +P +Y LI A E A++ L+ M S G PD+ Y
Sbjct: 351 GKIEEALNLLKLMKEKGLSPDAYSYDPLIAAFCREGRLDLAIEFLETMISDGCLPDIVNY 410
Query: 363 NVIIRGMCKEGMVDEAYAFVRSLPSRGCNPDVISYNIXXXXXXXXXRWKEGE-----GLI 199
N ++ +CK G D+A L GC+P+ SYN W G+ +I
Sbjct: 411 NTVLATLCKNGKADQALEIFGKLGEVGCSPNSSSYN-----TMFSALWSSGDKIRALHMI 465
Query: 198 SEMISNGCGPNVVTYSILINSLCQDGKVDMAVDVLKDMMKSGLVPDTYSYDPVISAFCKE 19
SEM+S G P+ +TY+ +I+ LC++G VD A D+L DM P +Y+ V+ FCK
Sbjct: 466 SEMVSQGIDPDEITYNSMISCLCREGMVDEAFDLLVDMRSCEFHPSVVTYNIVLLGFCKA 525
Query: 18 GRLEVA 1
R+E A
Sbjct: 526 HRIEDA 531
Score = 90.9 bits (224), Expect = 3e-16
Identities = 49/155 (31%), Positives = 83/155 (53%)
Frame = -3
Query: 543 GKLGSALKALDQLLEDNCTPTVVTYTILIEATITERGTQSAMKLLDEMSSKGLRPDMYTY 364
GK AL+ +L E C+P +Y + A + A+ ++ EM S+G+ PD TY
Sbjct: 421 GKADQALEIFGKLGEVGCSPNSSSYNTMFSALWSSGDKIRALHMISEMVSQGIDPDEITY 480
Query: 363 NVIIRGMCKEGMVDEAYAFVRSLPSRGCNPDVISYNIXXXXXXXXXRWKEGEGLISEMIS 184
N +I +C+EGMVDEA+ + + S +P V++YNI R ++ ++ M+
Sbjct: 481 NSMISCLCREGMVDEAFDLLVDMRSCEFHPSVVTYNIVLLGFCKAHRIEDAIDVLESMVG 540
Query: 183 NGCGPNVVTYSILINSLCQDGKVDMAVDVLKDMMK 79
NGC PN TY++LI + G A+++ D+++
Sbjct: 541 NGCRPNESTYTVLIEGIGFAGYRAEAMELANDLVR 575
Score = 88.2 bits (217), Expect = 2e-15
Identities = 48/175 (27%), Positives = 84/175 (48%), Gaps = 34/175 (19%)
Frame = -3
Query: 423 AMKLLDEMSSKGL----------------------------------RPDMYTYNVIIRG 346
++ LL+ M KG +PD++ YN +I G
Sbjct: 112 SLHLLESMVRKGYNPDVILCTKLIKGFFTLRNIPKAVRVMEILEKFGQPDVFAYNALING 171
Query: 345 MCKEGMVDEAYAFVRSLPSRGCNPDVISYNIXXXXXXXXXRWKEGEGLISEMISNGCGPN 166
CK +D+A + + S+G +PD ++YNI + ++ +++S+ C P
Sbjct: 172 FCKMNRIDDATRVLDRMRSKGFSPDTVTYNIMIGSLCSRGKLVLALKVLDQLLSDNCQPT 231
Query: 165 VVTYSILINSLCQDGKVDMAVDVLKDMMKSGLVPDTYSYDPVISAFCKEGRLEVA 1
V+TY+ILI + +G VD A+ +L +M+ GL PD ++Y+ +I CKEG ++ A
Sbjct: 232 VITYTILIEATMLEGGVDEALKLLDEMLSRGLKPDMFTYNTIIRGMCKEGMVDRA 286
Score = 85.9 bits (211), Expect = 1e-14
Identities = 61/239 (25%), Positives = 97/239 (40%), Gaps = 70/239 (29%)
Frame = -3
Query: 543 GKLGSALKALDQLLEDNCTPTVVTYTILIEATITERGTQSAMKLLDEMSSKGLRPDMYTY 364
GK K + ++ + C P VVTY+ILI + + A+ LL M KGL PD Y+Y
Sbjct: 316 GKWEEGEKLMTKMFSEKCDPNVVTYSILITTLCRDGKIEEALNLLKLMKEKGLSPDAYSY 375
Query: 363 NVIIRGMCKEGMVDEAYAFVRSLPSRGCNPDVI--------------------------- 265
+ +I C+EG +D A F+ ++ S GC PD++
Sbjct: 376 DPLIAAFCREGRLDLAIEFLETMISDGCLPDIVNYNTVLATLCKNGKADQALEIFGKLGE 435
Query: 264 ---SYNIXXXXXXXXXRWKEGEGL-----ISEMISNGCGPN------------------- 166
S N W G+ + ISEM+S G P+
Sbjct: 436 VGCSPNSSSYNTMFSALWSSGDKIRALHMISEMVSQGIDPDEITYNSMISCLCREGMVDE 495
Query: 165 ----------------VVTYSILINSLCQDGKVDMAVDVLKDMMKSGLVPDTYSYDPVI 37
VVTY+I++ C+ +++ A+DVL+ M+ +G P+ +Y +I
Sbjct: 496 AFDLLVDMRSCEFHPSVVTYNIVLLGFCKAHRIEDAIDVLESMVGNGCRPNESTYTVLI 554