BLASTX nr result
ID: Cinnamomum24_contig00024283
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Cinnamomum24_contig00024283
(376 letters)
Database: ./nr
77,306,371 sequences; 28,104,191,420 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_009380016.1| PREDICTED: serine/arginine-rich splicing fac... 59 1e-06
gb|KQJ98745.1| hypothetical protein BRADI_3g38797 [Brachypodium ... 59 1e-06
gb|KQJ98744.1| hypothetical protein BRADI_3g38797 [Brachypodium ... 59 1e-06
ref|XP_010484190.1| PREDICTED: serine/arginine-rich splicing fac... 59 2e-06
ref|XP_010444350.1| PREDICTED: serine/arginine-rich splicing fac... 59 2e-06
ref|XP_010461476.1| PREDICTED: serine/arginine-rich splicing fac... 59 2e-06
ref|XP_006394186.1| hypothetical protein EUTSA_v10004709mg [Eutr... 59 2e-06
ref|XP_006279670.1| hypothetical protein CARUB_v10026844mg [Caps... 59 2e-06
ref|NP_201225.1| SC35-like splicing factor [Arabidopsis thaliana... 59 2e-06
ref|XP_002866601.1| hypothetical protein ARALYDRAFT_496619 [Arab... 59 2e-06
emb|CAC03600.1| splicing factor SC35 [Arabidopsis thaliana] 59 2e-06
gb|KJB77523.1| hypothetical protein B456_012G141900, partial [Go... 58 2e-06
gb|KJB77521.1| hypothetical protein B456_012G141900, partial [Go... 58 2e-06
ref|XP_012459642.1| PREDICTED: serine/arginine-rich splicing fac... 58 2e-06
gb|KQL26735.1| hypothetical protein SETIT_030903mg [Setaria ital... 58 3e-06
gb|KQL26737.1| hypothetical protein SETIT_030903mg [Setaria ital... 58 3e-06
ref|XP_012838901.1| PREDICTED: LOW QUALITY PROTEIN: serine/argin... 58 3e-06
ref|XP_004958366.1| PREDICTED: serine/arginine-rich splicing fac... 58 3e-06
gb|KDO80952.1| hypothetical protein CISIN_1g022930mg [Citrus sin... 57 4e-06
ref|XP_006472615.1| PREDICTED: serine/arginine-rich splicing fac... 57 4e-06
>ref|XP_009380016.1| PREDICTED: serine/arginine-rich splicing factor SC35-like isoform
X2 [Musa acuminata subsp. malaccensis]
Length = 247
Score = 59.3 bits (142), Expect = 1e-06
Identities = 38/106 (35%), Positives = 53/106 (50%), Gaps = 15/106 (14%)
Frame = +3
Query: 90 FGR*DPVFDVFLPKDKASEKGRGFGFVQYKIEWDANRAIQRFDGSLVYGRRI*VQ----- 254
F R V DVF+P+D+ S + RGF FV+YK +A +A++R DG V GR I VQ
Sbjct: 36 FDRYGKVVDVFIPRDRRSGESRGFAFVRYKYADEAQKAVERLDGRNVDGRNIMVQFAKYG 95
Query: 255 -------KARVIDRNAKKFGQVK---PAPEKKDQTIVTDLSRREGS 362
K R+++ K G+ + P P +D D RR S
Sbjct: 96 PNAERIHKGRIVEAIPKTRGRSRSRSPRPRYRDSNRERDYRRRSRS 141
>gb|KQJ98745.1| hypothetical protein BRADI_3g38797 [Brachypodium distachyon]
Length = 316
Score = 58.9 bits (141), Expect = 1e-06
Identities = 39/98 (39%), Positives = 50/98 (51%), Gaps = 7/98 (7%)
Frame = +3
Query: 90 FGR*DPVFDVFLPKDKASEKGRGFGFVQYKIEWDANRAIQRFDGSLVYGRRI*VQ----K 257
F R V DVF+P+D+ + RGF FV+YK +A +A+ R DG V GR I VQ K
Sbjct: 36 FDRYGKVVDVFIPRDRRTGDSRGFAFVRYKYADEAQKAVDRLDGRNVDGRNIMVQFANRK 95
Query: 258 ARVIDRNAKKFGQVK---PAPEKKDQTIVTDLSRREGS 362
RVI+ K + + P P KD D RR S
Sbjct: 96 GRVIEEVEKLHDRSRSRSPRPRHKDDRRDRDHKRRSRS 133
>gb|KQJ98744.1| hypothetical protein BRADI_3g38797 [Brachypodium distachyon]
Length = 313
Score = 58.9 bits (141), Expect = 1e-06
Identities = 39/98 (39%), Positives = 50/98 (51%), Gaps = 7/98 (7%)
Frame = +3
Query: 90 FGR*DPVFDVFLPKDKASEKGRGFGFVQYKIEWDANRAIQRFDGSLVYGRRI*VQ----K 257
F R V DVF+P+D+ + RGF FV+YK +A +A+ R DG V GR I VQ K
Sbjct: 36 FDRYGKVVDVFIPRDRRTGDSRGFAFVRYKYADEAQKAVDRLDGRNVDGRNIMVQFANRK 95
Query: 258 ARVIDRNAKKFGQVK---PAPEKKDQTIVTDLSRREGS 362
RVI+ K + + P P KD D RR S
Sbjct: 96 GRVIEEVEKLHDRSRSRSPRPRHKDDRRDRDHKRRSRS 133
>ref|XP_010484190.1| PREDICTED: serine/arginine-rich splicing factor SC35 [Camelina
sativa]
Length = 148
Score = 58.5 bits (140), Expect = 2e-06
Identities = 32/80 (40%), Positives = 51/80 (63%), Gaps = 3/80 (3%)
Frame = +3
Query: 90 FGR*DPVFDVFLPKDKASEKGRGFGFVQYKIEWDANRAIQRFDGSLVYGRRI*VQKARVI 269
F + V DVF+P+D+ + RGF FV+YK + +A++A++R DG +V GR I VQ A+
Sbjct: 36 FAKYGKVVDVFIPRDRRTGDSRGFAFVRYKYKDEAHKAVERLDGRVVDGREITVQFAK-Y 94
Query: 270 DRNAKKFGQ---VKPAPEKK 320
NA+K + V+P P+ +
Sbjct: 95 GPNAEKISKGRVVEPPPKSR 114
>ref|XP_010444350.1| PREDICTED: serine/arginine-rich splicing factor SC35-like [Camelina
sativa]
Length = 305
Score = 58.5 bits (140), Expect = 2e-06
Identities = 32/80 (40%), Positives = 51/80 (63%), Gaps = 3/80 (3%)
Frame = +3
Query: 90 FGR*DPVFDVFLPKDKASEKGRGFGFVQYKIEWDANRAIQRFDGSLVYGRRI*VQKARVI 269
F + V DVF+P+D+ + RGF FV+YK + +A++A++R DG +V GR I VQ A+
Sbjct: 36 FAKYGKVVDVFIPRDRRTGDSRGFAFVRYKYKDEAHKAVERLDGRVVDGREITVQFAK-Y 94
Query: 270 DRNAKKFGQ---VKPAPEKK 320
NA+K + V+P P+ +
Sbjct: 95 GPNAEKISKGRVVEPPPKSR 114
>ref|XP_010461476.1| PREDICTED: serine/arginine-rich splicing factor SC35-like [Camelina
sativa]
Length = 305
Score = 58.5 bits (140), Expect = 2e-06
Identities = 32/80 (40%), Positives = 51/80 (63%), Gaps = 3/80 (3%)
Frame = +3
Query: 90 FGR*DPVFDVFLPKDKASEKGRGFGFVQYKIEWDANRAIQRFDGSLVYGRRI*VQKARVI 269
F + V DVF+P+D+ + RGF FV+YK + +A++A++R DG +V GR I VQ A+
Sbjct: 36 FAKYGKVVDVFIPRDRRTGDSRGFAFVRYKYKDEAHKAVERLDGRVVDGREITVQFAK-Y 94
Query: 270 DRNAKKFGQ---VKPAPEKK 320
NA+K + V+P P+ +
Sbjct: 95 GPNAEKISRGRVVEPPPKSR 114
>ref|XP_006394186.1| hypothetical protein EUTSA_v10004709mg [Eutrema salsugineum]
gi|557090825|gb|ESQ31472.1| hypothetical protein
EUTSA_v10004709mg [Eutrema salsugineum]
Length = 292
Score = 58.5 bits (140), Expect = 2e-06
Identities = 32/80 (40%), Positives = 51/80 (63%), Gaps = 3/80 (3%)
Frame = +3
Query: 90 FGR*DPVFDVFLPKDKASEKGRGFGFVQYKIEWDANRAIQRFDGSLVYGRRI*VQKARVI 269
F + V DVF+P+D+ + RGF FV+YK + +A++A++R DG +V GR I VQ A+
Sbjct: 36 FAKYGKVVDVFIPRDRRTGDSRGFAFVRYKYKDEAHKAVERLDGRVVDGREITVQFAK-Y 94
Query: 270 DRNAKKFGQ---VKPAPEKK 320
NA+K + V+P P+ +
Sbjct: 95 GPNAEKISKGRVVEPPPKSR 114
>ref|XP_006279670.1| hypothetical protein CARUB_v10026844mg [Capsella rubella]
gi|482548374|gb|EOA12568.1| hypothetical protein
CARUB_v10026844mg [Capsella rubella]
Length = 305
Score = 58.5 bits (140), Expect = 2e-06
Identities = 32/80 (40%), Positives = 50/80 (62%), Gaps = 3/80 (3%)
Frame = +3
Query: 90 FGR*DPVFDVFLPKDKASEKGRGFGFVQYKIEWDANRAIQRFDGSLVYGRRI*VQKARVI 269
F + V DVF+P+D+ + RGF FV+YK + +A +A++R DG +V GR I VQ A+
Sbjct: 36 FAKYGKVVDVFIPRDRRTGDSRGFAFVRYKYKEEAQKAVERLDGRVVDGREITVQFAK-Y 94
Query: 270 DRNAKKFGQ---VKPAPEKK 320
NA+K + V+P P+ +
Sbjct: 95 GPNAEKISKGRVVEPPPKSR 114
>ref|NP_201225.1| SC35-like splicing factor [Arabidopsis thaliana]
gi|30697964|ref|NP_851261.1| SC35-like splicing factor
[Arabidopsis thaliana]
gi|75334068|sp|Q9FMG4.1|SC35_ARATH RecName:
Full=Serine/arginine-rich splicing factor SC35;
Short=At-SC35; Short=AtSC35; AltName: Full=SC35-like
splicing factor gi|9759396|dbj|BAB09851.1| unnamed
protein product [Arabidopsis thaliana]
gi|17380868|gb|AAL36246.1| unknown protein [Arabidopsis
thaliana] gi|21689657|gb|AAM67450.1| unknown protein
[Arabidopsis thaliana] gi|22022546|gb|AAM83231.1|
AT5g64200/MSJ1_4 [Arabidopsis thaliana]
gi|23505861|gb|AAN28790.1| At5g64200/MSJ1_4 [Arabidopsis
thaliana] gi|332010470|gb|AED97853.1| SC35-like splicing
factor [Arabidopsis thaliana]
gi|332010471|gb|AED97854.1| SC35-like splicing factor
[Arabidopsis thaliana]
Length = 303
Score = 58.5 bits (140), Expect = 2e-06
Identities = 32/80 (40%), Positives = 51/80 (63%), Gaps = 3/80 (3%)
Frame = +3
Query: 90 FGR*DPVFDVFLPKDKASEKGRGFGFVQYKIEWDANRAIQRFDGSLVYGRRI*VQKARVI 269
F + V DVF+P+D+ + RGF FV+YK + +A++A++R DG +V GR I VQ A+
Sbjct: 36 FAKYGKVVDVFIPRDRRTGDSRGFAFVRYKYKDEAHKAVERLDGRVVDGREITVQFAK-Y 94
Query: 270 DRNAKKFGQ---VKPAPEKK 320
NA+K + V+P P+ +
Sbjct: 95 GPNAEKISKGRVVEPPPKSR 114
>ref|XP_002866601.1| hypothetical protein ARALYDRAFT_496619 [Arabidopsis lyrata subsp.
lyrata] gi|297312436|gb|EFH42860.1| hypothetical protein
ARALYDRAFT_496619 [Arabidopsis lyrata subsp. lyrata]
Length = 305
Score = 58.5 bits (140), Expect = 2e-06
Identities = 32/80 (40%), Positives = 51/80 (63%), Gaps = 3/80 (3%)
Frame = +3
Query: 90 FGR*DPVFDVFLPKDKASEKGRGFGFVQYKIEWDANRAIQRFDGSLVYGRRI*VQKARVI 269
F + V DVF+P+D+ + RGF FV+YK + +A++A++R DG +V GR I VQ A+
Sbjct: 36 FAKYGKVVDVFIPRDRRTGDSRGFAFVRYKYKDEAHKAVERLDGRVVDGREITVQFAK-Y 94
Query: 270 DRNAKKFGQ---VKPAPEKK 320
NA+K + V+P P+ +
Sbjct: 95 GPNAEKISKGRVVEPPPKSR 114
>emb|CAC03600.1| splicing factor SC35 [Arabidopsis thaliana]
Length = 303
Score = 58.5 bits (140), Expect = 2e-06
Identities = 32/80 (40%), Positives = 51/80 (63%), Gaps = 3/80 (3%)
Frame = +3
Query: 90 FGR*DPVFDVFLPKDKASEKGRGFGFVQYKIEWDANRAIQRFDGSLVYGRRI*VQKARVI 269
F + V DVF+P+D+ + RGF FV+YK + +A++A++R DG +V GR I VQ A+
Sbjct: 36 FAKYGKVVDVFIPRDRRTGDSRGFAFVRYKYKDEAHKAVERLDGRVVDGREITVQFAK-Y 94
Query: 270 DRNAKKFGQ---VKPAPEKK 320
NA+K + V+P P+ +
Sbjct: 95 GPNAEKISKGRVVEPPPKSR 114
>gb|KJB77523.1| hypothetical protein B456_012G141900, partial [Gossypium raimondii]
Length = 319
Score = 58.2 bits (139), Expect = 2e-06
Identities = 31/83 (37%), Positives = 50/83 (60%), Gaps = 3/83 (3%)
Frame = +3
Query: 90 FGR*DPVFDVFLPKDKASEKGRGFGFVQYKIEWDANRAIQRFDGSLVYGRRI*VQKARVI 269
FG+ V D+F+PKD+ + RGF FV+YK +A +A+ R DG +V GR I VQ A+
Sbjct: 67 FGKYGKVVDIFIPKDRRTGDSRGFAFVRYKYADEAQKAVDRLDGRVVDGREITVQFAK-Y 125
Query: 270 DRNAKKFGQ---VKPAPEKKDQT 329
NA++ + ++P P + ++
Sbjct: 126 GPNAERIHKGRIIEPVPRSRSRS 148
>gb|KJB77521.1| hypothetical protein B456_012G141900, partial [Gossypium raimondii]
gi|763810620|gb|KJB77522.1| hypothetical protein
B456_012G141900, partial [Gossypium raimondii]
Length = 284
Score = 58.2 bits (139), Expect = 2e-06
Identities = 31/83 (37%), Positives = 50/83 (60%), Gaps = 3/83 (3%)
Frame = +3
Query: 90 FGR*DPVFDVFLPKDKASEKGRGFGFVQYKIEWDANRAIQRFDGSLVYGRRI*VQKARVI 269
FG+ V D+F+PKD+ + RGF FV+YK +A +A+ R DG +V GR I VQ A+
Sbjct: 67 FGKYGKVVDIFIPKDRRTGDSRGFAFVRYKYADEAQKAVDRLDGRVVDGREITVQFAK-Y 125
Query: 270 DRNAKKFGQ---VKPAPEKKDQT 329
NA++ + ++P P + ++
Sbjct: 126 GPNAERIHKGRIIEPVPRSRSRS 148
>ref|XP_012459642.1| PREDICTED: serine/arginine-rich splicing factor SC35 [Gossypium
raimondii] gi|763810618|gb|KJB77520.1| hypothetical
protein B456_012G141900 [Gossypium raimondii]
Length = 253
Score = 58.2 bits (139), Expect = 2e-06
Identities = 31/83 (37%), Positives = 50/83 (60%), Gaps = 3/83 (3%)
Frame = +3
Query: 90 FGR*DPVFDVFLPKDKASEKGRGFGFVQYKIEWDANRAIQRFDGSLVYGRRI*VQKARVI 269
FG+ V D+F+PKD+ + RGF FV+YK +A +A+ R DG +V GR I VQ A+
Sbjct: 36 FGKYGKVVDIFIPKDRRTGDSRGFAFVRYKYADEAQKAVDRLDGRVVDGREITVQFAK-Y 94
Query: 270 DRNAKKFGQ---VKPAPEKKDQT 329
NA++ + ++P P + ++
Sbjct: 95 GPNAERIHKGRIIEPVPRSRSRS 117
>gb|KQL26735.1| hypothetical protein SETIT_030903mg [Setaria italica]
Length = 244
Score = 57.8 bits (138), Expect = 3e-06
Identities = 31/83 (37%), Positives = 50/83 (60%), Gaps = 3/83 (3%)
Frame = +3
Query: 90 FGR*DPVFDVFLPKDKASEKGRGFGFVQYKIEWDANRAIQRFDGSLVYGRRI*VQKARVI 269
F + V D+++P+D+ + RGF FV+YK E +A +A+ R DG LV GR I VQ A+
Sbjct: 36 FDKYGEVVDIYIPRDRRTGDSRGFAFVRYKYEDEAQKAVDRLDGKLVDGREIMVQFAK-Y 94
Query: 270 DRNAKKFGQ---VKPAPEKKDQT 329
NA++ + V+P P + ++
Sbjct: 95 GPNAERINKGRIVEPVPRSRGRS 117
>gb|KQL26737.1| hypothetical protein SETIT_030903mg [Setaria italica]
gi|944262482|gb|KQL26739.1| hypothetical protein
SETIT_030903mg [Setaria italica]
Length = 250
Score = 57.8 bits (138), Expect = 3e-06
Identities = 31/83 (37%), Positives = 50/83 (60%), Gaps = 3/83 (3%)
Frame = +3
Query: 90 FGR*DPVFDVFLPKDKASEKGRGFGFVQYKIEWDANRAIQRFDGSLVYGRRI*VQKARVI 269
F + V D+++P+D+ + RGF FV+YK E +A +A+ R DG LV GR I VQ A+
Sbjct: 36 FDKYGEVVDIYIPRDRRTGDSRGFAFVRYKYEDEAQKAVDRLDGKLVDGREIMVQFAK-Y 94
Query: 270 DRNAKKFGQ---VKPAPEKKDQT 329
NA++ + V+P P + ++
Sbjct: 95 GPNAERINKGRIVEPVPRSRGRS 117
>ref|XP_012838901.1| PREDICTED: LOW QUALITY PROTEIN: serine/arginine-rich splicing
factor SC35 [Erythranthe guttatus]
Length = 256
Score = 57.8 bits (138), Expect = 3e-06
Identities = 36/101 (35%), Positives = 53/101 (52%), Gaps = 10/101 (9%)
Frame = +3
Query: 90 FGR*DPVFDVFLPKDKASEKGRGFGFVQYKIEWDANRAIQRFDGSLVYGRRI*VQ----- 254
F + V DVF+P+D+ S RGF FV+YK +A +A+++ DG +V GR I VQ
Sbjct: 36 FDKYGKVVDVFIPRDRRSGDSRGFAFVRYKYPEEAQKAVEKLDGRVVDGREIMVQXNAER 95
Query: 255 --KARVIDRNAKKFGQVK---PAPEKKDQTIVTDLSRREGS 362
K R+ + K G+ + P P +D+ D RR S
Sbjct: 96 IHKGRIEEPEFKSKGRSRSRSPRPRDRDRDRDRDHRRRSRS 136
>ref|XP_004958366.1| PREDICTED: serine/arginine-rich splicing factor SC35 [Setaria
italica] gi|944262479|gb|KQL26736.1| hypothetical
protein SETIT_030903mg [Setaria italica]
gi|944262481|gb|KQL26738.1| hypothetical protein
SETIT_030903mg [Setaria italica]
Length = 251
Score = 57.8 bits (138), Expect = 3e-06
Identities = 31/83 (37%), Positives = 50/83 (60%), Gaps = 3/83 (3%)
Frame = +3
Query: 90 FGR*DPVFDVFLPKDKASEKGRGFGFVQYKIEWDANRAIQRFDGSLVYGRRI*VQKARVI 269
F + V D+++P+D+ + RGF FV+YK E +A +A+ R DG LV GR I VQ A+
Sbjct: 36 FDKYGEVVDIYIPRDRRTGDSRGFAFVRYKYEDEAQKAVDRLDGKLVDGREIMVQFAK-Y 94
Query: 270 DRNAKKFGQ---VKPAPEKKDQT 329
NA++ + V+P P + ++
Sbjct: 95 GPNAERINKGRIVEPVPRSRGRS 117
>gb|KDO80952.1| hypothetical protein CISIN_1g022930mg [Citrus sinensis]
gi|641862266|gb|KDO80953.1| hypothetical protein
CISIN_1g022930mg [Citrus sinensis]
Length = 195
Score = 57.4 bits (137), Expect = 4e-06
Identities = 34/100 (34%), Positives = 53/100 (53%), Gaps = 15/100 (15%)
Frame = +3
Query: 108 VFDVFLPKDKASEKGRGFGFVQYKIEWDANRAIQRFDGSLVYGRRI*V------------ 251
V DVF+P+D+ + RGF FV+YK +A +A+ R DG +V GR I V
Sbjct: 42 VVDVFIPRDRRTGDSRGFAFVRYKYADEAQKAVDRLDGRVVDGREITVQFAKYGPNAEKI 101
Query: 252 QKARVIDRNAKKFGQVK---PAPEKKDQTIVTDLSRREGS 362
Q+ R+++ ++K G+ + P P +D+ D RR S
Sbjct: 102 QQGRIVESSSKSKGRSRSRSPRPRYRDEHRDKDYRRRSRS 141
>ref|XP_006472615.1| PREDICTED: serine/arginine-rich splicing factor 2-like [Citrus
sinensis] gi|641862260|gb|KDO80947.1| hypothetical
protein CISIN_1g022930mg [Citrus sinensis]
gi|641862261|gb|KDO80948.1| hypothetical protein
CISIN_1g022930mg [Citrus sinensis]
gi|641862262|gb|KDO80949.1| hypothetical protein
CISIN_1g022930mg [Citrus sinensis]
Length = 251
Score = 57.4 bits (137), Expect = 4e-06
Identities = 34/100 (34%), Positives = 53/100 (53%), Gaps = 15/100 (15%)
Frame = +3
Query: 108 VFDVFLPKDKASEKGRGFGFVQYKIEWDANRAIQRFDGSLVYGRRI*V------------ 251
V DVF+P+D+ + RGF FV+YK +A +A+ R DG +V GR I V
Sbjct: 42 VVDVFIPRDRRTGDSRGFAFVRYKYADEAQKAVDRLDGRVVDGREITVQFAKYGPNAEKI 101
Query: 252 QKARVIDRNAKKFGQVK---PAPEKKDQTIVTDLSRREGS 362
Q+ R+++ ++K G+ + P P +D+ D RR S
Sbjct: 102 QQGRIVESSSKSKGRSRSRSPRPRYRDEHRDKDYRRRSRS 141