BLASTX nr result

ID: Cinnamomum24_contig00023302 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cinnamomum24_contig00023302
         (319 letters)

Database: ./nr 
           77,306,371 sequences; 28,104,191,420 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_010261754.1| PREDICTED: uncharacterized protein LOC104600...    58   2e-06
ref|XP_010111982.1| hypothetical protein L484_008155 [Morus nota...    57   7e-06

>ref|XP_010261754.1| PREDICTED: uncharacterized protein LOC104600492 [Nelumbo nucifera]
          Length = 1403

 Score = 58.2 bits (139), Expect = 2e-06
 Identities = 26/43 (60%), Positives = 33/43 (76%)
 Frame = -3

Query: 140 MGVSFKVAKTGTRFRPKAPQAEISVDDAVENSKESPRVFSGNE 12
           MG+SFKVAK GTRFR K PQAE   DD ++ SK++ R+ +GNE
Sbjct: 1   MGISFKVAKNGTRFRLKPPQAESVPDDGIDTSKDNSRILAGNE 43


>ref|XP_010111982.1| hypothetical protein L484_008155 [Morus notabilis]
           gi|587945924|gb|EXC32293.1| hypothetical protein
           L484_008155 [Morus notabilis]
          Length = 1358

 Score = 56.6 bits (135), Expect = 7e-06
 Identities = 28/49 (57%), Positives = 36/49 (73%), Gaps = 3/49 (6%)
 Frame = -3

Query: 140 MGVSFKVAKTGTRFRPK---APQAEISVDDAVENSKESPRVFSGNESSA 3
           MGVSFKV+KTGTRFRPK        ++VDD  ENS++S R+  G+ES+A
Sbjct: 1   MGVSFKVSKTGTRFRPKPSLQSDTNVAVDDVAENSRDSLRIVRGDESNA 49


Top