BLASTX nr result

ID: Cinnamomum24_contig00022982 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cinnamomum24_contig00022982
         (242 letters)

Database: ./nr 
           77,306,371 sequences; 28,104,191,420 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004301691.2| PREDICTED: putative pentatricopeptide repeat...    64   3e-08
emb|CDP12753.1| unnamed protein product [Coffea canephora]             62   2e-07
ref|XP_007211064.1| hypothetical protein PRUPE_ppa018108mg [Prun...    62   2e-07
ref|XP_008239578.1| PREDICTED: putative pentatricopeptide repeat...    61   4e-07
gb|KMT10669.1| hypothetical protein BVRB_5g117830 [Beta vulgaris...    60   6e-07
ref|XP_010678845.1| PREDICTED: putative pentatricopeptide repeat...    60   6e-07
ref|XP_010419506.1| PREDICTED: putative pentatricopeptide repeat...    60   6e-07
ref|XP_006300931.1| hypothetical protein CARUB_v10021308mg [Caps...    60   6e-07
ref|XP_008374396.1| PREDICTED: putative pentatricopeptide repeat...    59   1e-06
ref|XP_010474616.1| PREDICTED: putative pentatricopeptide repeat...    59   1e-06
ref|XP_008358062.1| PREDICTED: LOW QUALITY PROTEIN: putative pen...    59   1e-06
gb|ERN04844.1| hypothetical protein AMTR_s00146p00058200 [Ambore...    59   2e-06
ref|XP_002887903.1| pentatricopeptide repeat-containing protein ...    59   2e-06
ref|XP_013688315.1| PREDICTED: putative pentatricopeptide repeat...    58   3e-06
ref|XP_013607200.1| PREDICTED: putative pentatricopeptide repeat...    58   3e-06
emb|CDY64787.1| BnaCnng44930D [Brassica napus]                         58   3e-06
emb|CBI14973.3| unnamed protein product [Vitis vinifera]               57   7e-06
ref|XP_002278116.1| PREDICTED: putative pentatricopeptide repeat...    57   7e-06
ref|XP_002868974.1| hypothetical protein ARALYDRAFT_490847 [Arab...    57   7e-06
emb|CAN62187.1| hypothetical protein VITISV_003709 [Vitis vinifera]    57   7e-06

>ref|XP_004301691.2| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g64310 [Fragaria vesca subsp. vesca]
          Length = 570

 Score = 64.3 bits (155), Expect = 3e-08
 Identities = 29/52 (55%), Positives = 38/52 (73%)
 Frame = -3

Query: 240 IRAYFQHSNFSHGFSLFTQMRNSETKPDDFTFACVLRALSELTDGGGLKLIH 85
           IRA+ Q   F H FSLF +M  SETKPD+FT+AC++RA S+  D  GL+L+H
Sbjct: 90  IRAHAQAHRFDHAFSLFNRMLRSETKPDNFTYACLIRACSDSLDLDGLRLVH 141


>emb|CDP12753.1| unnamed protein product [Coffea canephora]
          Length = 550

 Score = 62.0 bits (149), Expect = 2e-07
 Identities = 29/53 (54%), Positives = 38/53 (71%)
 Frame = -3

Query: 240 IRAYFQHSNFSHGFSLFTQMRNSETKPDDFTFACVLRALSELTDGGGLKLIHG 82
           IRAY +   FS  F+LF +M + ET PD+FTFAC+LRA SE  D  GL+++HG
Sbjct: 76  IRAYAKTHLFSDAFALFKRMLSLETSPDNFTFACILRACSEKADINGLEIVHG 128


>ref|XP_007211064.1| hypothetical protein PRUPE_ppa018108mg [Prunus persica]
           gi|462406799|gb|EMJ12263.1| hypothetical protein
           PRUPE_ppa018108mg [Prunus persica]
          Length = 558

 Score = 62.0 bits (149), Expect = 2e-07
 Identities = 29/52 (55%), Positives = 37/52 (71%)
 Frame = -3

Query: 240 IRAYFQHSNFSHGFSLFTQMRNSETKPDDFTFACVLRALSELTDGGGLKLIH 85
           IRA+ Q   F   FSLFT+M  +E KPD+FT+AC++RA SE  D  GLKL+H
Sbjct: 76  IRAHAQAHKFDEAFSLFTKMLRTEIKPDNFTYACIIRACSESFDLEGLKLVH 127


>ref|XP_008239578.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g64310 [Prunus mume]
          Length = 565

 Score = 60.8 bits (146), Expect = 4e-07
 Identities = 28/52 (53%), Positives = 37/52 (71%)
 Frame = -3

Query: 240 IRAYFQHSNFSHGFSLFTQMRNSETKPDDFTFACVLRALSELTDGGGLKLIH 85
           IRA+ Q   F   FSLFT+M  +E +PD+FT+AC++RA SE  D  GLKL+H
Sbjct: 76  IRAHAQAHKFEEAFSLFTKMLRTEIRPDNFTYACIIRACSESFDLEGLKLVH 127


>gb|KMT10669.1| hypothetical protein BVRB_5g117830 [Beta vulgaris subsp. vulgaris]
          Length = 527

 Score = 60.1 bits (144), Expect = 6e-07
 Identities = 29/53 (54%), Positives = 38/53 (71%)
 Frame = -3

Query: 240 IRAYFQHSNFSHGFSLFTQMRNSETKPDDFTFACVLRALSELTDGGGLKLIHG 82
           IRAY Q  +F + F LF Q+ +S+  PD+FTFAC+LRA SE  D  G++LIHG
Sbjct: 49  IRAYAQVHDFKNAFHLFNQLLSSDLCPDNFTFACILRACSENHDVVGVRLIHG 101


>ref|XP_010678845.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g64310 [Beta vulgaris subsp. vulgaris]
          Length = 554

 Score = 60.1 bits (144), Expect = 6e-07
 Identities = 29/53 (54%), Positives = 38/53 (71%)
 Frame = -3

Query: 240 IRAYFQHSNFSHGFSLFTQMRNSETKPDDFTFACVLRALSELTDGGGLKLIHG 82
           IRAY Q  +F + F LF Q+ +S+  PD+FTFAC+LRA SE  D  G++LIHG
Sbjct: 76  IRAYAQVHDFKNAFHLFNQLLSSDLCPDNFTFACILRACSENHDVVGVRLIHG 128


>ref|XP_010419506.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g64310 [Camelina sativa]
          Length = 552

 Score = 60.1 bits (144), Expect = 6e-07
 Identities = 28/53 (52%), Positives = 38/53 (71%)
 Frame = -3

Query: 240 IRAYFQHSNFSHGFSLFTQMRNSETKPDDFTFACVLRALSELTDGGGLKLIHG 82
           IRA+ +   FS  FSLF+QM +S+T+PD+FT+AC+ R  SE  D  GL+ IHG
Sbjct: 78  IRAFAKAHQFSTAFSLFSQMLSSDTRPDNFTYACLARGCSESFDTEGLRCIHG 130


>ref|XP_006300931.1| hypothetical protein CARUB_v10021308mg [Capsella rubella]
           gi|482569641|gb|EOA33829.1| hypothetical protein
           CARUB_v10021308mg [Capsella rubella]
          Length = 553

 Score = 60.1 bits (144), Expect = 6e-07
 Identities = 28/53 (52%), Positives = 37/53 (69%)
 Frame = -3

Query: 240 IRAYFQHSNFSHGFSLFTQMRNSETKPDDFTFACVLRALSELTDGGGLKLIHG 82
           IRAY +   FS  FSLF+QM +S+ +PD+FT+AC+ R  SE  D  GL+ IHG
Sbjct: 78  IRAYAKAHQFSTAFSLFSQMLSSDRRPDNFTYACLARGFSESFDTDGLRCIHG 130


>ref|XP_008374396.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g64310 [Malus domestica]
          Length = 552

 Score = 59.3 bits (142), Expect = 1e-06
 Identities = 26/52 (50%), Positives = 38/52 (73%)
 Frame = -3

Query: 240 IRAYFQHSNFSHGFSLFTQMRNSETKPDDFTFACVLRALSELTDGGGLKLIH 85
           IRA+ Q   F   FSLF++MR ++ KPD+FT+AC++RA ++  D  GLKL+H
Sbjct: 72  IRAHAQAYRFEDAFSLFSEMRRTDIKPDNFTYACIVRACADSFDLDGLKLVH 123


>ref|XP_010474616.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g64310 [Camelina sativa]
          Length = 552

 Score = 58.9 bits (141), Expect = 1e-06
 Identities = 28/53 (52%), Positives = 37/53 (69%)
 Frame = -3

Query: 240 IRAYFQHSNFSHGFSLFTQMRNSETKPDDFTFACVLRALSELTDGGGLKLIHG 82
           IRA+ +   FS  FSLF+QM +S T+PD+FT+AC+ R  SE  D  GL+ IHG
Sbjct: 78  IRAFAKAHQFSTAFSLFSQMLSSATRPDNFTYACLARGCSESFDTEGLRCIHG 130


>ref|XP_008358062.1| PREDICTED: LOW QUALITY PROTEIN: putative pentatricopeptide
           repeat-containing protein At1g64310 [Malus domestica]
          Length = 591

 Score = 58.9 bits (141), Expect = 1e-06
 Identities = 27/52 (51%), Positives = 36/52 (69%)
 Frame = -3

Query: 240 IRAYFQHSNFSHGFSLFTQMRNSETKPDDFTFACVLRALSELTDGGGLKLIH 85
           IRA+ Q   F   FSLF +MR +E KPD+FT AC++RA ++  D  GLKL+H
Sbjct: 72  IRAHAQARGFEDAFSLFAEMRRTEIKPDNFTHACIVRACADSFDLDGLKLVH 123


>gb|ERN04844.1| hypothetical protein AMTR_s00146p00058200 [Amborella trichopoda]
          Length = 164

 Score = 58.5 bits (140), Expect = 2e-06
 Identities = 28/52 (53%), Positives = 36/52 (69%)
 Frame = -3

Query: 240 IRAYFQHSNFSHGFSLFTQMRNSETKPDDFTFACVLRALSELTDGGGLKLIH 85
           IRAY ++   +H FSL+ QM+ SETKPD  TFAC+LR  SE +D   LK+ H
Sbjct: 73  IRAYAKNQQVNHAFSLYIQMQASETKPDGHTFACILRLCSENSDCCRLKITH 124


>ref|XP_002887903.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata] gi|297333744|gb|EFH64162.1|
           pentatricopeptide repeat-containing protein [Arabidopsis
           lyrata subsp. lyrata]
          Length = 552

 Score = 58.5 bits (140), Expect = 2e-06
 Identities = 27/53 (50%), Positives = 37/53 (69%)
 Frame = -3

Query: 240 IRAYFQHSNFSHGFSLFTQMRNSETKPDDFTFACVLRALSELTDGGGLKLIHG 82
           IRAY +   FS   SLF+QM +S+T+PD+FT+AC+ R  SE  D  GL+ +HG
Sbjct: 78  IRAYAKAYQFSTSLSLFSQMLSSDTRPDNFTYACLARGFSESFDTEGLRRVHG 130


>ref|XP_013688315.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g64310 [Brassica napus]
          Length = 554

 Score = 57.8 bits (138), Expect = 3e-06
 Identities = 27/53 (50%), Positives = 36/53 (67%)
 Frame = -3

Query: 240 IRAYFQHSNFSHGFSLFTQMRNSETKPDDFTFACVLRALSELTDGGGLKLIHG 82
           IRAY +  +     SLF+QM +S+TKPD FT+AC+ R  SE +D  GL+ IHG
Sbjct: 78  IRAYAKSHHLGPASSLFSQMLSSDTKPDSFTYACLARGFSESSDTEGLRCIHG 130


>ref|XP_013607200.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g64310 [Brassica oleracea var. oleracea]
          Length = 554

 Score = 57.8 bits (138), Expect = 3e-06
 Identities = 27/53 (50%), Positives = 36/53 (67%)
 Frame = -3

Query: 240 IRAYFQHSNFSHGFSLFTQMRNSETKPDDFTFACVLRALSELTDGGGLKLIHG 82
           IRAY +  +     SLF+QM +S+TKPD FT+AC+ R  SE +D  GL+ IHG
Sbjct: 78  IRAYAKSHHLGPASSLFSQMLSSDTKPDSFTYACLARGFSESSDTEGLRCIHG 130


>emb|CDY64787.1| BnaCnng44930D [Brassica napus]
          Length = 520

 Score = 57.8 bits (138), Expect = 3e-06
 Identities = 27/53 (50%), Positives = 36/53 (67%)
 Frame = -3

Query: 240 IRAYFQHSNFSHGFSLFTQMRNSETKPDDFTFACVLRALSELTDGGGLKLIHG 82
           IRAY +  +     SLF+QM +S+TKPD FT+AC+ R  SE +D  GL+ IHG
Sbjct: 78  IRAYAKSHHLGPASSLFSQMLSSDTKPDSFTYACLARGFSESSDTEGLRCIHG 130


>emb|CBI14973.3| unnamed protein product [Vitis vinifera]
          Length = 504

 Score = 56.6 bits (135), Expect = 7e-06
 Identities = 27/53 (50%), Positives = 33/53 (62%)
 Frame = -3

Query: 240 IRAYFQHSNFSHGFSLFTQMRNSETKPDDFTFACVLRALSELTDGGGLKLIHG 82
           IRAY     F     LF +M  +E KPD FTFACVLRA +E  D  GL+++HG
Sbjct: 82  IRAYAGEHQFDDALLLFAKMLRTEIKPDSFTFACVLRACAENFDPDGLRVVHG 134


>ref|XP_002278116.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g64310 [Vitis vinifera]
          Length = 560

 Score = 56.6 bits (135), Expect = 7e-06
 Identities = 27/53 (50%), Positives = 33/53 (62%)
 Frame = -3

Query: 240 IRAYFQHSNFSHGFSLFTQMRNSETKPDDFTFACVLRALSELTDGGGLKLIHG 82
           IRAY     F     LF +M  +E KPD FTFACVLRA +E  D  GL+++HG
Sbjct: 82  IRAYAGEHQFDDALLLFAKMLRTEIKPDSFTFACVLRACAENFDPDGLRVVHG 134


>ref|XP_002868974.1| hypothetical protein ARALYDRAFT_490847 [Arabidopsis lyrata subsp.
           lyrata] gi|297314810|gb|EFH45233.1| hypothetical protein
           ARALYDRAFT_490847, partial [Arabidopsis lyrata subsp.
           lyrata]
          Length = 427

 Score = 56.6 bits (135), Expect = 7e-06
 Identities = 26/52 (50%), Positives = 34/52 (65%)
 Frame = -3

Query: 237 RAYFQHSNFSHGFSLFTQMRNSETKPDDFTFACVLRALSELTDGGGLKLIHG 82
           R Y +   FS   SLF+QM +S+T+PD+FT+ CV R  SE  D  GL+ IHG
Sbjct: 59  RTYAKAHQFSTSLSLFSQMLSSDTRPDNFTYVCVARGFSESFDSEGLRRIHG 110


>emb|CAN62187.1| hypothetical protein VITISV_003709 [Vitis vinifera]
          Length = 560

 Score = 56.6 bits (135), Expect = 7e-06
 Identities = 27/53 (50%), Positives = 33/53 (62%)
 Frame = -3

Query: 240 IRAYFQHSNFSHGFSLFTQMRNSETKPDDFTFACVLRALSELTDGGGLKLIHG 82
           IRAY     F     LF +M  +E KPD FTFACVLRA +E  D  GL+++HG
Sbjct: 82  IRAYAGEHQFDDALLLFAKMLRTEIKPDSFTFACVLRACAENFDPDGLRVVHG 134


Top