BLASTX nr result
ID: Cinnamomum24_contig00022831
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Cinnamomum24_contig00022831
(563 letters)
Database: ./nr
77,306,371 sequences; 28,104,191,420 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
emb|CAN79317.1| hypothetical protein VITISV_008344 [Vitis vinifera] 62 2e-07
emb|CAN71683.1| hypothetical protein VITISV_040973 [Vitis vinifera] 60 5e-07
ref|WP_020618607.1| hypothetical protein [Paenibacillus daejeone... 59 1e-06
ref|WP_018758608.1| ribonuclease H [Paenibacillus terrigena] 59 2e-06
ref|WP_035338013.1| ribonuclease H [Dokdonia sp. PRO95] 59 2e-06
ref|XP_009587261.1| PREDICTED: ribonuclease H-like [Nicotiana to... 59 2e-06
ref|WP_025697136.1| ribonuclease H [Paenibacillus forsythiae] 59 2e-06
ref|WP_013750597.1| ribonuclease H [Dokdonia sp. 4H-3-7-5] gi|33... 58 3e-06
ref|WP_044235543.1| ribonuclease H [Haliscomenobacter hydrossis] 58 3e-06
ref|XP_005099284.1| PREDICTED: ribonuclease H1-like [Aplysia cal... 58 3e-06
ref|WP_015220827.1| double-stranded RNA/RNA-DNA hybrid-binding p... 58 3e-06
gb|AEE52666.1| ribonuclease H-related protein [Haliscomenobacter... 58 3e-06
ref|WP_015845420.1| ribonuclease H [Paenibacillus sp. JDR-2] gi|... 58 3e-06
ref|XP_009610939.1| PREDICTED: ribonuclease H-like [Nicotiana to... 57 5e-06
ref|WP_031539932.1| MULTISPECIES: ribonuclease H [Bacillus] 57 5e-06
ref|WP_025688124.1| ribonuclease H [Paenibacillus zanthoxyli] 57 5e-06
ref|WP_025335787.1| ribonuclease H [Paenibacillus sabinae] gi|60... 57 5e-06
ref|WP_036668512.1| ribonuclease H [Paenibacillus sp. FSL R5-192... 57 5e-06
ref|WP_017687140.1| hypothetical protein [Paenibacillus sp. PAMC... 57 5e-06
ref|WP_027394588.1| ribonuclease H [Aquimarina latercula] 57 6e-06
>emb|CAN79317.1| hypothetical protein VITISV_008344 [Vitis vinifera]
Length = 118
Score = 61.6 bits (148), Expect = 2e-07
Identities = 25/47 (53%), Positives = 35/47 (74%)
Frame = -1
Query: 485 NEKHYVVFNGREPGIYNSWPECHQQVDRYSSNCHRSYKGYDEAARSY 345
N+ +YVVF GR+ GIYNSWPEC +QV Y N ++ YK ++EA R++
Sbjct: 28 NDVYYVVFAGRKKGIYNSWPECQEQVVGYKGNVYKLYKTFEEARRAW 74
>emb|CAN71683.1| hypothetical protein VITISV_040973 [Vitis vinifera]
Length = 375
Score = 60.5 bits (145), Expect = 5e-07
Identities = 25/47 (53%), Positives = 35/47 (74%)
Frame = -1
Query: 485 NEKHYVVFNGREPGIYNSWPECHQQVDRYSSNCHRSYKGYDEAARSY 345
N+ +YVVF R+ GIYNSWPEC +QV Y N ++SYK ++EA R++
Sbjct: 264 NDVYYVVFAVRKSGIYNSWPECQEQVVGYKGNVYKSYKTFEEARRAW 310
>ref|WP_020618607.1| hypothetical protein [Paenibacillus daejeonensis]
Length = 215
Score = 59.3 bits (142), Expect = 1e-06
Identities = 26/66 (39%), Positives = 42/66 (63%)
Frame = -1
Query: 479 KHYVVFNGREPGIYNSWPECHQQVDRYSSNCHRSYKGYDEAARSYEQFRGDFKGESVSKS 300
K+YVV+ G++PGIY +WP+C +QV+ Y+ ++S+ EA ++Y++ F G S
Sbjct: 5 KYYVVWQGKQPGIYTNWPDCQKQVNGYTDAKYKSFATKAEAEQAYQKGWKGFWGSGSGSS 64
Query: 299 SGPKTV 282
SG K V
Sbjct: 65 SGAKRV 70
>ref|WP_018758608.1| ribonuclease H [Paenibacillus terrigena]
Length = 219
Score = 58.9 bits (141), Expect = 2e-06
Identities = 24/63 (38%), Positives = 43/63 (68%)
Frame = -1
Query: 482 EKHYVVFNGREPGIYNSWPECHQQVDRYSSNCHRSYKGYDEAARSYEQFRGDFKGESVSK 303
+K+YVV+ G++PGIY +WPEC +QV+++ ++SY+ EA ++Y+ + ++ SK
Sbjct: 4 QKYYVVWAGKKPGIYKTWPECQEQVNQFPQAKYKSYETLAEAEKAYQGGAKSYWNQAGSK 63
Query: 302 SSG 294
SG
Sbjct: 64 GSG 66
>ref|WP_035338013.1| ribonuclease H [Dokdonia sp. PRO95]
Length = 211
Score = 58.5 bits (140), Expect = 2e-06
Identities = 27/72 (37%), Positives = 43/72 (59%)
Frame = -1
Query: 482 EKHYVVFNGREPGIYNSWPECHQQVDRYSSNCHRSYKGYDEAARSYEQFRGDFKGESVSK 303
+K YVV+ G++PGIY SW EC + +D Y+ ++S++ + +A +Y DFKG S K
Sbjct: 5 KKFYVVWEGKKPGIYESWKECKKMIDGYAGAKYKSFETFAKAKNAYNGDYNDFKGSSKKK 64
Query: 302 SSGPKTVVKEER 267
K + EE+
Sbjct: 65 ----KVLTAEEK 72
>ref|XP_009587261.1| PREDICTED: ribonuclease H-like [Nicotiana tomentosiformis]
Length = 170
Score = 58.5 bits (140), Expect = 2e-06
Identities = 26/70 (37%), Positives = 42/70 (60%), Gaps = 2/70 (2%)
Frame = -1
Query: 503 LGMSKDNE--KHYVVFNGREPGIYNSWPECHQQVDRYSSNCHRSYKGYDEAARSYEQFRG 330
+G K N+ K YVVF G+ PG+YNSW +C V + +++K YDEA ++ +FR
Sbjct: 1 MGDGKRNKASKVYVVFRGKRPGLYNSWHQCAPMVTGVKGSIFKAFKSYDEAIAAFNEFRN 60
Query: 329 DFKGESVSKS 300
+ +++S S
Sbjct: 61 GSQADNISAS 70
>ref|WP_025697136.1| ribonuclease H [Paenibacillus forsythiae]
Length = 222
Score = 58.5 bits (140), Expect = 2e-06
Identities = 29/79 (36%), Positives = 45/79 (56%), Gaps = 3/79 (3%)
Frame = -1
Query: 482 EKHYVVFNGREPGIYNSWPECHQQVDRYSSNCHRSYKGYDEAARSYEQFRGDFK---GES 312
+K+YVV+ GR+PG+Y +W EC QQ D ++ YK Y+ A + E FR +K G++
Sbjct: 4 QKYYVVWEGRKPGVYATWAECKQQTDGFTG---AKYKSYESKAAAGEAFRAGWKGNWGKA 60
Query: 311 VSKSSGPKTVVKEERFEGK 255
+K G +E R G+
Sbjct: 61 GAKQGGAAGGARENRSSGR 79
>ref|WP_013750597.1| ribonuclease H [Dokdonia sp. 4H-3-7-5] gi|332169834|gb|AEE19089.1|
ribonuclease H-related protein [Dokdonia sp. 4H-3-7-5]
Length = 211
Score = 58.2 bits (139), Expect = 3e-06
Identities = 24/60 (40%), Positives = 39/60 (65%)
Frame = -1
Query: 482 EKHYVVFNGREPGIYNSWPECHQQVDRYSSNCHRSYKGYDEAARSYEQFRGDFKGESVSK 303
+K YVV+ G++PGIY+SW EC + +D Y+ ++S++ + +A +Y DFKG S K
Sbjct: 5 KKFYVVWEGKKPGIYDSWKECKKMIDGYAGAKYKSFETFAKAKNAYNGDYNDFKGSSKKK 64
>ref|WP_044235543.1| ribonuclease H [Haliscomenobacter hydrossis]
Length = 213
Score = 57.8 bits (138), Expect = 3e-06
Identities = 25/69 (36%), Positives = 45/69 (65%)
Frame = -1
Query: 482 EKHYVVFNGREPGIYNSWPECHQQVDRYSSNCHRSYKGYDEAARSYEQFRGDFKGESVSK 303
+K+YVV+ G +PGIY SW EC Q++ + ++SY+ EA ++++Q FK +K
Sbjct: 5 KKYYVVWTGAKPGIYESWAECQAQINGFPGARYKSYESKAEADKAFKQTAPSFK-PGAAK 63
Query: 302 SSGPKTVVK 276
+SG ++++K
Sbjct: 64 TSGSQSIIK 72
>ref|XP_005099284.1| PREDICTED: ribonuclease H1-like [Aplysia californica]
Length = 347
Score = 57.8 bits (138), Expect = 3e-06
Identities = 28/77 (36%), Positives = 44/77 (57%)
Frame = -1
Query: 497 MSKDNEKHYVVFNGREPGIYNSWPECHQQVDRYSSNCHRSYKGYDEAARSYEQFRGDFKG 318
M K+ +Y V GR+PG+Y+SWPECH+QV +S+ + + ++A +F + KG
Sbjct: 19 MPKETSWYYAVKRGRKPGVYHSWPECHEQVKGFSNPVFKKFSSSEDAL----EFVHNSKG 74
Query: 317 ESVSKSSGPKTVVKEER 267
+ SSGP V + R
Sbjct: 75 FTPCTSSGPPVTVGQLR 91
>ref|WP_015220827.1| double-stranded RNA/RNA-DNA hybrid-binding protein [Cyanobacterium
aponinum] gi|428685641|gb|AFZ55108.1| double-stranded
RNA/RNA-DNA hybrid binding protein [Cyanobacterium
aponinum PCC 10605]
Length = 214
Score = 57.8 bits (138), Expect = 3e-06
Identities = 29/76 (38%), Positives = 48/76 (63%)
Frame = -1
Query: 497 MSKDNEKHYVVFNGREPGIYNSWPECHQQVDRYSSNCHRSYKGYDEAARSYEQFRGDFKG 318
MSK+N+K+YVV+ GR+ GI+N+W EC QQV +S ++SYK EA ++ +G+
Sbjct: 1 MSKNNKKYYVVWQGRKTGIFNTWKECEQQVINFSGARYKSYKTLLEAESAFNS-QGNTTV 59
Query: 317 ESVSKSSGPKTVVKEE 270
+S+ S + +E+
Sbjct: 60 KSLQNSRNLNKLSQEK 75
>gb|AEE52666.1| ribonuclease H-related protein [Haliscomenobacter hydrossis DSM
1100]
Length = 218
Score = 57.8 bits (138), Expect = 3e-06
Identities = 25/69 (36%), Positives = 45/69 (65%)
Frame = -1
Query: 482 EKHYVVFNGREPGIYNSWPECHQQVDRYSSNCHRSYKGYDEAARSYEQFRGDFKGESVSK 303
+K+YVV+ G +PGIY SW EC Q++ + ++SY+ EA ++++Q FK +K
Sbjct: 10 KKYYVVWTGAKPGIYESWAECQAQINGFPGARYKSYESKAEADKAFKQTAPSFK-PGAAK 68
Query: 302 SSGPKTVVK 276
+SG ++++K
Sbjct: 69 TSGSQSIIK 77
>ref|WP_015845420.1| ribonuclease H [Paenibacillus sp. JDR-2]
gi|247545461|gb|ACT02480.1| ribonuclease H-related
protein [Paenibacillus sp. JDR-2]
Length = 225
Score = 57.8 bits (138), Expect = 3e-06
Identities = 27/68 (39%), Positives = 42/68 (61%), Gaps = 4/68 (5%)
Frame = -1
Query: 479 KHYVVFNGREPGIYNSWPECHQQVDRYSSNCHRSYKGYDEAARSYEQ----FRGDFKGES 312
KHYVV+ G++PG+Y SWPEC QV+ Y ++S++ D+A +Y++ G KG +
Sbjct: 5 KHYVVWVGKQPGVYKSWPECQAQVNGYPEAKYKSFESKDKAEAAYKEGWKNHWGQGKGAA 64
Query: 311 VSKSSGPK 288
S +S K
Sbjct: 65 TSAASPAK 72
>ref|XP_009610939.1| PREDICTED: ribonuclease H-like [Nicotiana tomentosiformis]
gi|697114089|ref|XP_009610940.1| PREDICTED: ribonuclease
H-like [Nicotiana tomentosiformis]
Length = 170
Score = 57.4 bits (137), Expect = 5e-06
Identities = 30/72 (41%), Positives = 40/72 (55%), Gaps = 4/72 (5%)
Frame = -1
Query: 500 GMSKDN---EKHYVVFNGREPGIYNSWPECHQQVDRYSSNCHRSYKGYDEAARSYEQFRG 330
G DN K YVVF G+ PG+YNSW EC V + + +SYK YDEA ++ +F+
Sbjct: 61 GSQADNISASKVYVVFRGKRPGLYNSWCECAPMVIGFKGSIFKSYKSYDEAIAAFNEFQE 120
Query: 329 D-FKGESVSKSS 297
+ E S SS
Sbjct: 121 ENVDSEEPSSSS 132
>ref|WP_031539932.1| MULTISPECIES: ribonuclease H [Bacillus]
Length = 208
Score = 57.4 bits (137), Expect = 5e-06
Identities = 25/65 (38%), Positives = 40/65 (61%)
Frame = -1
Query: 482 EKHYVVFNGREPGIYNSWPECHQQVDRYSSNCHRSYKGYDEAARSYEQFRGDFKGESVSK 303
+K+YVV+NGR+PGIY +W EC +Q + +SY+ +EA +++ Q G G+ +K
Sbjct: 4 KKYYVVWNGRKPGIYRTWAECEKQTKGFKGAAFKSYQSLEEAEKAFNQ--GGSFGQKAAK 61
Query: 302 SSGPK 288
S K
Sbjct: 62 GSSSK 66
>ref|WP_025688124.1| ribonuclease H [Paenibacillus zanthoxyli]
Length = 222
Score = 57.4 bits (137), Expect = 5e-06
Identities = 27/78 (34%), Positives = 43/78 (55%), Gaps = 2/78 (2%)
Frame = -1
Query: 482 EKHYVVFNGREPGIYNSWPECHQQVDRYSSNCHRSYKGYDEAARSYEQFRGDFKGE--SV 309
+K+YVV+ GR+PG+Y +W EC +Q D+++ YK Y+ A + E FR +KG +
Sbjct: 4 QKYYVVWEGRKPGVYATWAECKRQTDQFTG---AKYKSYESKAAAEEAFRAGWKGNWGNT 60
Query: 308 SKSSGPKTVVKEERFEGK 255
G V +E + K
Sbjct: 61 GSEKGRAAVGSQESYTSK 78
>ref|WP_025335787.1| ribonuclease H [Paenibacillus sabinae] gi|605575630|gb|AHV98297.1|
ribonuclease H-like protein [Paenibacillus sabinae T27]
Length = 222
Score = 57.4 bits (137), Expect = 5e-06
Identities = 24/55 (43%), Positives = 36/55 (65%)
Frame = -1
Query: 482 EKHYVVFNGREPGIYNSWPECHQQVDRYSSNCHRSYKGYDEAARSYEQFRGDFKG 318
+K+YVV+ GR+PG+Y +W EC QQ D+++ YK Y+ + E FRG +KG
Sbjct: 4 QKYYVVWEGRKPGVYATWAECKQQTDQFTG---AKYKSYESKQAAEEAFRGGWKG 55
>ref|WP_036668512.1| ribonuclease H [Paenibacillus sp. FSL R5-192]
gi|573540532|gb|ETT39482.1| ribonuclease H-like protein
[Paenibacillus sp. FSL R5-192]
Length = 217
Score = 57.4 bits (137), Expect = 5e-06
Identities = 24/63 (38%), Positives = 38/63 (60%)
Frame = -1
Query: 482 EKHYVVFNGREPGIYNSWPECHQQVDRYSSNCHRSYKGYDEAARSYEQFRGDFKGESVSK 303
+K+YVV+ G++PG+YN+W +C Q D Y+ YK Y+ A + E +R +KG S
Sbjct: 4 QKYYVVWEGKKPGVYNTWADCKAQTDHYTG---AKYKSYESKAAAEEAYRAGWKGNWGSS 60
Query: 302 SSG 294
+ G
Sbjct: 61 AGG 63
>ref|WP_017687140.1| hypothetical protein [Paenibacillus sp. PAMC 26794]
Length = 217
Score = 57.4 bits (137), Expect = 5e-06
Identities = 24/63 (38%), Positives = 38/63 (60%)
Frame = -1
Query: 482 EKHYVVFNGREPGIYNSWPECHQQVDRYSSNCHRSYKGYDEAARSYEQFRGDFKGESVSK 303
+K+YVV+ G++PG+YN+W +C Q D Y+ YK Y+ A + E +R +KG S
Sbjct: 4 QKYYVVWEGKKPGVYNTWADCKAQTDHYTG---AKYKSYESKATAEEAYRAGWKGNWGSS 60
Query: 302 SSG 294
+ G
Sbjct: 61 AGG 63
>ref|WP_027394588.1| ribonuclease H [Aquimarina latercula]
Length = 211
Score = 57.0 bits (136), Expect = 6e-06
Identities = 26/62 (41%), Positives = 38/62 (61%)
Frame = -1
Query: 482 EKHYVVFNGREPGIYNSWPECHQQVDRYSSNCHRSYKGYDEAARSYEQFRGDFKGESVSK 303
EK YVV+ G +PGIY W +C V Y+S +S++ +D A ++Y D+KG+S K
Sbjct: 5 EKFYVVWEGHKPGIYTKWDDCKAAVKGYASAKFKSFESFDLAKKAYNGNYEDYKGKSKPK 64
Query: 302 SS 297
SS
Sbjct: 65 SS 66