BLASTX nr result

ID: Cinnamomum24_contig00022788 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cinnamomum24_contig00022788
         (359 letters)

Database: ./nr 
           77,306,371 sequences; 28,104,191,420 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004986985.1| PREDICTED: F-box protein At5g07610-like [Set...    58   3e-06

>ref|XP_004986985.1| PREDICTED: F-box protein At5g07610-like [Setaria italica]
           gi|944226454|gb|KQK90858.1| hypothetical protein
           SETIT_038997mg [Setaria italica]
          Length = 379

 Score = 57.8 bits (138), Expect = 3e-06
 Identities = 43/118 (36%), Positives = 62/118 (52%), Gaps = 13/118 (11%)
 Frame = -3

Query: 357 ILSRLPPKSLIDCKRVSRAFGILVSTLIHSPTRPRQISGLFIVTKNQST-ATEAIWYCNL 181
           ILSRLP KSL  CK VS  +  L+S   H    P+ ++GLF +T+N      EA  + N+
Sbjct: 26  ILSRLPVKSLCRCKCVSTRWRGLISHPDHRRRLPQTLAGLFYITENPGRFPAEARHFTNI 85

Query: 180 RD-DRNGY-------NLHFLPCHPATRLEDHRHGFLLC-SSERTNYQLY---VCNPVT 43
            D +R          +L F+P H    ++D  +G LLC   E T++ ++   VCNP T
Sbjct: 86  WDWERRRQSPPLICPSLSFIPGHEHISIQDSCNGLLLCRRPESTSFDVFCYVVCNPAT 143


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