BLASTX nr result

ID: Cinnamomum24_contig00022542 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cinnamomum24_contig00022542
         (618 letters)

Database: ./nr 
           77,306,371 sequences; 28,104,191,420 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_010264405.1| PREDICTED: scarecrow-like protein 27 [Nelumb...    72   2e-10
ref|XP_010258971.1| PREDICTED: scarecrow-like protein 6 [Nelumbo...    72   2e-10

>ref|XP_010264405.1| PREDICTED: scarecrow-like protein 27 [Nelumbo nucifera]
          Length = 835

 Score = 72.4 bits (176), Expect = 2e-10
 Identities = 63/187 (33%), Positives = 79/187 (42%), Gaps = 31/187 (16%)
 Frame = -1

Query: 468 HPPNPI-----FSLPPSI-----------LDPLDEKPHVFN-------LQHHIYPQNPAF 358
           +PPNPI      S PP +           L+P DEKP +FN        Q   +PQNP F
Sbjct: 317 NPPNPINLPLPISFPPGMFFQQSQQQQPQLEPADEKPQLFNPPQVPINQQQAHHPQNPTF 376

Query: 357 LLPTPPYTHAQEXXXXXXXXXPKRRHPTIPDMGFLIPRAPFSDSGLEXXXXXXXXXXXXS 178
            +P P YT  ++          KR H T+ D    IP+ PFSDSG E             
Sbjct: 377 FMPLP-YTQQEQHLLPPQP---KRYHATV-DPSCQIPKVPFSDSGQELFLRRQQQQQQQG 431

Query: 177 ---NLHLLPQHSQHKPPL-----KLMGGSPEDSTTXXXXXXXXXXXXXXAELVEAGNSIH 22
               L LL  H   +P       K++G   E +                AELVEAGNS+H
Sbjct: 432 FPPQLQLLSPHLPQRPTTMATKPKVVGAGDEVAHQHQQQQALIDQLFKAAELVEAGNSVH 491

Query: 21  AQEILAR 1
           A+ ILAR
Sbjct: 492 ARGILAR 498


>ref|XP_010258971.1| PREDICTED: scarecrow-like protein 6 [Nelumbo nucifera]
          Length = 810

 Score = 72.4 bits (176), Expect = 2e-10
 Identities = 74/237 (31%), Positives = 91/237 (38%), Gaps = 44/237 (18%)
 Frame = -1

Query: 579 NGNMMNTSKQQLFSIQNPTNPLPXXXXXXXXXXXXDCHPPNPIF-----------SLPPS 433
           N N  N     + S+ N  +PLP               PPNPIF           S PP 
Sbjct: 244 NSNNQNGRVGSVTSVPN-ASPLPNYKVPCFASNNNGT-PPNPIFPPSANNLPLPISFPPG 301

Query: 432 I------------LDPLDEKPHVFNLQ--------HHIYPQNPAFLLPTPPYTHAQEXXX 313
           +            L+P DEKP +FN Q        HH  PQNP FL+P    ++AQ+   
Sbjct: 302 VFYPQQQHQQPPQLEPADEKPQLFNPQLLMNQQQAHH--PQNPPFLVPL---SYAQQEQH 356

Query: 312 XXXXXXPKRRHPTIPDMGFLIPRAPFSDSGLEXXXXXXXXXXXXSN--------LHLLPQ 157
                 PKR H  I     + P+ PF+DSG E                      L LLP 
Sbjct: 357 LLLPPQPKRPHSAIDPSCQIPPKVPFADSGQELFLRRQQLQQQQQQQEQQGFPQLQLLPP 416

Query: 156 HSQHKPPLKLMGGSPE-----DSTTXXXXXXXXXXXXXXAELVEAGNSIHAQEILAR 1
           H Q +P    M   P+     D                 AELVEAGNS+HA+ ILAR
Sbjct: 417 HLQQRPTT--MATKPKVVGTGDEVAHQQQQALVDQLFKAAELVEAGNSVHARGILAR 471


Top