BLASTX nr result
ID: Cinnamomum24_contig00022516
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Cinnamomum24_contig00022516
(428 letters)
Database: ./nr
77,306,371 sequences; 28,104,191,420 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
emb|CCH50966.1| T4.5 [Malus x robusta] 80 5e-13
emb|CAN70473.1| hypothetical protein VITISV_037490 [Vitis vinifera] 58 1e-11
emb|CAN62863.1| hypothetical protein VITISV_030334 [Vitis vinifera] 55 3e-11
emb|CAN62447.1| hypothetical protein VITISV_024007 [Vitis vinifera] 54 1e-10
emb|CAN78447.1| hypothetical protein VITISV_026810 [Vitis vinifera] 70 5e-10
gb|ABG00000.1| retrotransposon protein, putative, Ty1-copia subc... 70 5e-10
gb|AAN04167.1| Putative copia-like retrotransposon polyprotein [... 69 1e-09
gb|AAU43956.1| unknown protein [Oryza sativa Japonica Group] gi|... 69 1e-09
emb|CAN70817.1| hypothetical protein VITISV_029336 [Vitis vinifera] 52 1e-09
gb|ACY72569.1| unknown [Oryza sativa Japonica Group] 69 2e-09
dbj|BAB90546.1| putative rice retrotransposon retrofit gag/pol p... 68 2e-09
gb|ACV42639.1| gag/pol [Oryza sativa Japonica Group] 68 2e-09
ref|XP_008356535.1| PREDICTED: uncharacterized protein LOC103420... 68 3e-09
gb|ABF95616.1| retrotransposon protein, putative, Ty1-copia subc... 68 3e-09
ref|XP_008350165.1| PREDICTED: uncharacterized protein LOC103413... 67 4e-09
ref|XP_008386987.1| PREDICTED: uncharacterized protein LOC103449... 67 4e-09
ref|XP_008358436.1| PREDICTED: uncharacterized protein LOC103422... 67 5e-09
gb|AAB82754.1| retrofit [Oryza longistaminata] 67 5e-09
emb|CAN67073.1| hypothetical protein VITISV_011746 [Vitis vinifera] 67 5e-09
ref|XP_009344802.1| PREDICTED: uncharacterized protein LOC103936... 61 7e-09
>emb|CCH50966.1| T4.5 [Malus x robusta]
Length = 1670
Score = 80.5 bits (197), Expect = 5e-13
Identities = 44/129 (34%), Positives = 61/129 (47%), Gaps = 7/129 (5%)
Frame = -1
Query: 368 WCWSCYQPFXXXXXXXXXXXR-----SKNGLYPLQINLFHQNRGS--SPTALASVCVSSN 210
WC+ + PF S+ GLYP N + G SPTAL +
Sbjct: 671 WCYLTFDPFGFYVKDLSTGKMLFQGPSEGGLYPFYWNASNGVSGIAISPTALMIAKADIH 730
Query: 209 TWHHRLSHPALPIMHRLFSTHSLPVDGSKRLSSLCMACQMGXXXXXXXXXXXSTASKPLE 30
TWH RL HP+ +H + + LPV G S+C ACQ+G T+S+PL+
Sbjct: 731 TWHRRLGHPSGGTLHSVVHKNHLPVIGYVNNMSVCTACQLGKSYRLSFSTLPCTSSRPLQ 790
Query: 29 LIHSDIWGP 3
L+H+D+WGP
Sbjct: 791 LLHTDVWGP 799
>emb|CAN70473.1| hypothetical protein VITISV_037490 [Vitis vinifera]
Length = 786
Score = 58.2 bits (139), Expect(2) = 1e-11
Identities = 28/77 (36%), Positives = 37/77 (48%)
Frame = -1
Query: 239 ALASVCVSSNTWHHRLSHPALPIMHRLFSTHSLPVDGSKRLSSLCMACQMGXXXXXXXXX 60
A +SV SS WHHRL HP PI+ + S + L + S LC C
Sbjct: 151 AFSSVKTSSFEWHHRLGHPVFPILKHIVSHYQLDLSSSLISDFLCNVCHYNKNHKLPFST 210
Query: 59 XXSTASKPLELIHSDIW 9
+S+PLE+I SD+W
Sbjct: 211 STVVSSQPLEIIFSDVW 227
Score = 37.7 bits (86), Expect(2) = 1e-11
Identities = 16/40 (40%), Positives = 24/40 (60%)
Frame = -2
Query: 427 VSNLSFHSEYERGDQIAVGNGAGLAINHSGQRDGDDSCKG 308
+SNLS H+ Y D I +G+G+ L I H+G G + +G
Sbjct: 102 LSNLSLHTPYTGSDDIMIGDGSSLLITHTGTSHGGNPFEG 141
>emb|CAN62863.1| hypothetical protein VITISV_030334 [Vitis vinifera]
Length = 1442
Score = 55.5 bits (132), Expect(2) = 3e-11
Identities = 24/68 (35%), Positives = 39/68 (57%)
Frame = -1
Query: 206 WHHRLSHPALPIMHRLFSTHSLPVDGSKRLSSLCMACQMGXXXXXXXXXXXSTASKPLEL 27
WH RL HP+ PI+ L S SLP +K ++ LC +C + +++ PL++
Sbjct: 521 WHKRLGHPSYPIVKNLVSIFSLPTTTNK-ITMLCRSCSINKSHQQPFRTTSLSSTGPLKI 579
Query: 26 IHSDIWGP 3
I++D+WGP
Sbjct: 580 IYTDVWGP 587
Score = 39.3 bits (90), Expect(2) = 3e-11
Identities = 18/45 (40%), Positives = 30/45 (66%), Gaps = 3/45 (6%)
Frame = -2
Query: 427 VSNLSFHSEYERGDQIAVGNGAGLAINH---SGQRDGDDSCKGGV 302
+ NLS HSEY+ D++ +G+G+GLA++H +G SC+ G+
Sbjct: 450 LQNLSIHSEYDGTDEVVLGDGSGLAVSHEPITGAILLRGSCENGI 494
>emb|CAN62447.1| hypothetical protein VITISV_024007 [Vitis vinifera]
Length = 1144
Score = 54.3 bits (129), Expect(2) = 1e-10
Identities = 29/85 (34%), Positives = 44/85 (51%), Gaps = 2/85 (2%)
Frame = -1
Query: 251 SSPTALASVC--VSSNTWHHRLSHPALPIMHRLFSTHSLPVDGSKRLSSLCMACQMGXXX 78
S+P +A V S N WH RL HP++ ++ L + SLP+ +K L C +C +
Sbjct: 398 STPKMVAYVHERTSINGWHKRLGHPSIKVVQNLVNLFSLPLTTNK-LPLSCPSCSINKAH 456
Query: 77 XXXXXXXXSTASKPLELIHSDIWGP 3
+ PLE+I+SD+WGP
Sbjct: 457 QQPFGSTSFQSHSPLEIIYSDVWGP 481
Score = 38.5 bits (88), Expect(2) = 1e-10
Identities = 17/42 (40%), Positives = 26/42 (61%)
Frame = -2
Query: 427 VSNLSFHSEYERGDQIAVGNGAGLAINHSGQRDGDDSCKGGV 302
+ NLS HSEY+ D++ +G+G GLA +G +C+ GV
Sbjct: 346 IKNLSIHSEYDGTDEVLLGDGTGLAARSTGAILLRGACENGV 387
>emb|CAN78447.1| hypothetical protein VITISV_026810 [Vitis vinifera]
Length = 1171
Score = 70.5 bits (171), Expect = 5e-10
Identities = 38/99 (38%), Positives = 52/99 (52%), Gaps = 1/99 (1%)
Frame = -1
Query: 302 KNGLYPLQ-INLFHQNRGSSPTALASVCVSSNTWHHRLSHPALPIMHRLFSTHSLPVDGS 126
+NGLYPL FH++ T + V +++TWH RL HP+ I + LF ++ L V GS
Sbjct: 428 ENGLYPLAGCKTFHKSLTCLSTTIG-VRANADTWHSRLGHPSSVIFNSLFHSNKLSVKGS 486
Query: 125 KRLSSLCMACQMGXXXXXXXXXXXSTASKPLELIHSDIW 9
C ACQ+G +S PL LIHSD+W
Sbjct: 487 STKLEFCSACQLGKAKQLPFPESSRQSSVPLALIHSDVW 525
>gb|ABG00000.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
Japonica Group]
Length = 2074
Score = 70.5 bits (171), Expect = 5e-10
Identities = 35/100 (35%), Positives = 55/100 (55%)
Frame = -1
Query: 302 KNGLYPLQINLFHQNRGSSPTALASVCVSSNTWHHRLSHPALPIMHRLFSTHSLPVDGSK 123
+NGLYPL + + +S L ++ + + WH RL HP+L I+ ++ S+++LP G
Sbjct: 1388 RNGLYPLPTS----SLATSKQVLGAIKPTMSRWHSRLGHPSLAIVQKVVSSNNLPCLGDV 1443
Query: 122 RLSSLCMACQMGXXXXXXXXXXXSTASKPLELIHSDIWGP 3
S +C ACQ S ++ PLEL+ SD+WGP
Sbjct: 1444 NESGVCNACQQAKSHQLPYPKSFSVSNNPLELVFSDVWGP 1483
>gb|AAN04167.1| Putative copia-like retrotransposon polyprotein [Oryza sativa
Japonica Group] gi|31431217|gb|AAP53032.1|
retrotransposon protein, putative, Ty1-copia subclass
[Oryza sativa Japonica Group]
Length = 1042
Score = 69.3 bits (168), Expect = 1e-09
Identities = 37/100 (37%), Positives = 52/100 (52%)
Frame = -1
Query: 302 KNGLYPLQINLFHQNRGSSPTALASVCVSSNTWHHRLSHPALPIMHRLFSTHSLPVDGSK 123
++GLYPL SS +V S WH RL HP++PI+ ++ S++ LP
Sbjct: 326 RHGLYPLPST-------SSTKQAFAVAPSLERWHSRLGHPSIPIVMKVISSNKLPCLRES 378
Query: 122 RLSSLCMACQMGXXXXXXXXXXXSTASKPLELIHSDIWGP 3
S+C ACQ S ++KPLELI+SD+WGP
Sbjct: 379 NKESVCDACQKAKSHQLPYSNSMSVSNKPLELIYSDVWGP 418
>gb|AAU43956.1| unknown protein [Oryza sativa Japonica Group]
gi|52353503|gb|AAU44069.1| putative polyprotein [Oryza
sativa Japonica Group]
Length = 1447
Score = 69.3 bits (168), Expect = 1e-09
Identities = 36/97 (37%), Positives = 49/97 (50%)
Frame = -1
Query: 293 LYPLQINLFHQNRGSSPTALASVCVSSNTWHHRLSHPALPIMHRLFSTHSLPVDGSKRLS 114
LY L + H+ A ++ S WH RL HPA PI+ ++ S ++LP
Sbjct: 429 LYALPSSSPHERPRPLKEAFGAIKPSFERWHSRLGHPASPIVEKVISKNNLPCLAESNKQ 488
Query: 113 SLCMACQMGXXXXXXXXXXXSTASKPLELIHSDIWGP 3
S+C ACQ G S +S PLELI+SD+WGP
Sbjct: 489 SVCDACQQGKSHQLPYSRSSSMSSHPLELIYSDVWGP 525
>emb|CAN70817.1| hypothetical protein VITISV_029336 [Vitis vinifera]
Length = 1044
Score = 52.4 bits (124), Expect(2) = 1e-09
Identities = 28/85 (32%), Positives = 44/85 (51%), Gaps = 2/85 (2%)
Frame = -1
Query: 251 SSPTALASVC--VSSNTWHHRLSHPALPIMHRLFSTHSLPVDGSKRLSSLCMACQMGXXX 78
S+P +A V S + WH RL HP++ ++ L + SLP+ +K L C +C +
Sbjct: 274 STPKMVAYVHERTSIDGWHKRLGHPSIKVVQNLVNLFSLPLTTNK-LPLSCPSCSINKAH 332
Query: 77 XXXXXXXXSTASKPLELIHSDIWGP 3
+ PLE+I+SD+WGP
Sbjct: 333 QQPFGSTSFQSHSPLEIIYSDVWGP 357
Score = 36.6 bits (83), Expect(2) = 1e-09
Identities = 16/42 (38%), Positives = 25/42 (59%)
Frame = -2
Query: 427 VSNLSFHSEYERGDQIAVGNGAGLAINHSGQRDGDDSCKGGV 302
+ NLS HSEY+ D++ +G+G GL +G +C+ GV
Sbjct: 222 IKNLSIHSEYDGTDEVLLGDGTGLVARSTGVILLRGACENGV 263
>gb|ACY72569.1| unknown [Oryza sativa Japonica Group]
Length = 1436
Score = 68.6 bits (166), Expect = 2e-09
Identities = 36/100 (36%), Positives = 54/100 (54%)
Frame = -1
Query: 302 KNGLYPLQINLFHQNRGSSPTALASVCVSSNTWHHRLSHPALPIMHRLFSTHSLPVDGSK 123
++GLYP+ + R +S AL + +S + WH RL HP+LPI+ ++ S ++LP
Sbjct: 429 RHGLYPIPKSF---GRTTSKQALGTTKLSLSRWHSRLGHPSLPIVKQVISKNNLPCSVES 485
Query: 122 RLSSLCMACQMGXXXXXXXXXXXSTASKPLELIHSDIWGP 3
S+C ACQ S + PLEL+ SD+WGP
Sbjct: 486 VNQSVCNACQEAKSRQLPYVRSTSVSQFPLELVFSDVWGP 525
>dbj|BAB90546.1| putative rice retrotransposon retrofit gag/pol polyprotein [Oryza
sativa Japonica Group]
Length = 1448
Score = 68.2 bits (165), Expect = 2e-09
Identities = 35/100 (35%), Positives = 54/100 (54%)
Frame = -1
Query: 302 KNGLYPLQINLFHQNRGSSPTALASVCVSSNTWHHRLSHPALPIMHRLFSTHSLPVDGSK 123
++GLYP+ + R ++ AL + +S + WH RL HP+LPI+ ++ S ++LP
Sbjct: 432 RHGLYPIPKSF---GRSTNKQALGAAKLSLSRWHSRLGHPSLPIVKQVISRNNLPCSVES 488
Query: 122 RLSSLCMACQMGXXXXXXXXXXXSTASKPLELIHSDIWGP 3
S+C ACQ S + PLEL+ SD+WGP
Sbjct: 489 VNQSVCNACQEAKSHQLPYIRSTSVSQFPLELVFSDVWGP 528
>gb|ACV42639.1| gag/pol [Oryza sativa Japonica Group]
Length = 1448
Score = 68.2 bits (165), Expect = 2e-09
Identities = 35/100 (35%), Positives = 54/100 (54%)
Frame = -1
Query: 302 KNGLYPLQINLFHQNRGSSPTALASVCVSSNTWHHRLSHPALPIMHRLFSTHSLPVDGSK 123
++GLYP+ + R ++ AL + +S + WH RL HP+LPI+ ++ S ++LP
Sbjct: 432 RHGLYPIPKSF---GRSTNKQALGAAKLSLSRWHSRLGHPSLPIVKQVISRNNLPCSVES 488
Query: 122 RLSSLCMACQMGXXXXXXXXXXXSTASKPLELIHSDIWGP 3
S+C ACQ S + PLEL+ SD+WGP
Sbjct: 489 VNQSVCNACQEAKSHQLPYIRSTSVSQFPLELVFSDVWGP 528
>ref|XP_008356535.1| PREDICTED: uncharacterized protein LOC103420252 [Malus domestica]
Length = 1312
Score = 67.8 bits (164), Expect = 3e-09
Identities = 33/100 (33%), Positives = 49/100 (49%)
Frame = -1
Query: 302 KNGLYPLQINLFHQNRGSSPTALASVCVSSNTWHHRLSHPALPIMHRLFSTHSLPVDGSK 123
K+G +PL + SPTAL S + WH RL HP+ I ++ ST+ + V G+
Sbjct: 486 KDGFFPLHGSPALSTVSHSPTALVSTAANVRIWHSRLGHPSSAIFRKVLSTNKVVVHGTS 545
Query: 122 RLSSLCMACQMGXXXXXXXXXXXSTASKPLELIHSDIWGP 3
L+ C C + S ++ LEL+H D+WGP
Sbjct: 546 SLAFFCKDCALAKNHKLPFGSPQSVSTASLELLHCDVWGP 585
>gb|ABF95616.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
Japonica Group]
Length = 1241
Score = 67.8 bits (164), Expect = 3e-09
Identities = 33/77 (42%), Positives = 44/77 (57%)
Frame = -1
Query: 233 ASVCVSSNTWHHRLSHPALPIMHRLFSTHSLPVDGSKRLSSLCMACQMGXXXXXXXXXXX 54
A+ S + WH RL HPA+PI+ R+ S ++LP S+C ACQ G
Sbjct: 433 AATTPSFSRWHSRLGHPAVPIVTRVLSKNNLPCSTVANKDSICDACQKGKSHQLPYPKSS 492
Query: 53 STASKPLELIHSDIWGP 3
S +S+PLELI SD+WGP
Sbjct: 493 SVSSQPLELIFSDVWGP 509
>ref|XP_008350165.1| PREDICTED: uncharacterized protein LOC103413482 [Malus domestica]
Length = 891
Score = 67.4 bits (163), Expect = 4e-09
Identities = 34/100 (34%), Positives = 51/100 (51%)
Frame = -1
Query: 302 KNGLYPLQINLFHQNRGSSPTALASVCVSSNTWHHRLSHPALPIMHRLFSTHSLPVDGSK 123
K+G +PL + N SPTAL S + WH+ L +P+ I ++ ST+ + V G
Sbjct: 485 KDGFFPLHSSPALSNVXPSPTALVSTSANVXIWHNXLGYPSSAIFRKVLSTNKVVVQGKS 544
Query: 122 RLSSLCMACQMGXXXXXXXXXXXSTASKPLELIHSDIWGP 3
L+ C C + S ++K LEL+H D+WGP
Sbjct: 545 SLAFXCKDCALAKNHKLPFXTPQSVSTKRLELLHCDVWGP 584
>ref|XP_008386987.1| PREDICTED: uncharacterized protein LOC103449447 [Malus domestica]
Length = 1615
Score = 67.4 bits (163), Expect = 4e-09
Identities = 34/100 (34%), Positives = 51/100 (51%)
Frame = -1
Query: 302 KNGLYPLQINLFHQNRGSSPTALASVCVSSNTWHHRLSHPALPIMHRLFSTHSLPVDGSK 123
K+G +PL + N SPTAL S + WH+ L +P+ I ++ ST+ + V G
Sbjct: 485 KDGFFPLHSSPALSNVXPSPTALVSTSANVXIWHNXLGYPSSAIFRKVLSTNKVVVQGKS 544
Query: 122 RLSSLCMACQMGXXXXXXXXXXXSTASKPLELIHSDIWGP 3
L+ C C + S ++K LEL+H D+WGP
Sbjct: 545 SLAFXCKDCALAKNHKLPFXTPQSVSTKRLELLHCDVWGP 584
>ref|XP_008358436.1| PREDICTED: uncharacterized protein LOC103422178 [Malus domestica]
Length = 316
Score = 67.0 bits (162), Expect = 5e-09
Identities = 43/107 (40%), Positives = 53/107 (49%), Gaps = 8/107 (7%)
Frame = -1
Query: 305 SKNGLYPLQINLFHQNRGSSPTA-----LASVCVSSNTWHHRLSHPALPIMHRLFSTHS- 144
S NG YP SSPTA V VSS+ WH RL HP+ I+ LFS HS
Sbjct: 36 SSNGFYPFS--------SSSPTAHGRAAFLGVRVSSDVWHSRLGHPSSSILKFLFSRHSN 87
Query: 143 -LPVDGSKRLSS-LCMACQMGXXXXXXXXXXXSTASKPLELIHSDIW 9
LPV + L++ +C +C +G S PLELIHSD+W
Sbjct: 88 KLPVSSNLNLNTFMCHSCPLGKSVKLPFSASLSVTHAPLELIHSDVW 134
>gb|AAB82754.1| retrofit [Oryza longistaminata]
Length = 1445
Score = 67.0 bits (162), Expect = 5e-09
Identities = 36/100 (36%), Positives = 54/100 (54%)
Frame = -1
Query: 302 KNGLYPLQINLFHQNRGSSPTALASVCVSSNTWHHRLSHPALPIMHRLFSTHSLPVDGSK 123
++GLYP+ F R ++ AL + +S + WH RL HP+LPI+ ++ S ++LP
Sbjct: 428 RHGLYPIP-KFF--GRSTNKQALGAAKLSLSRWHSRLGHPSLPIVKQVISRNNLPCSVES 484
Query: 122 RLSSLCMACQMGXXXXXXXXXXXSTASKPLELIHSDIWGP 3
S+C ACQ S + PLEL+ SD+WGP
Sbjct: 485 VNQSVCNACQEAKSHQLPYIRSTSVSQFPLELVFSDVWGP 524
>emb|CAN67073.1| hypothetical protein VITISV_011746 [Vitis vinifera]
Length = 879
Score = 67.0 bits (162), Expect = 5e-09
Identities = 29/73 (39%), Positives = 45/73 (61%)
Frame = -1
Query: 305 SKNGLYPLQINLFHQNRGSSPTALASVCVSSNTWHHRLSHPALPIMHRLFSTHSLPVDGS 126
S+ GLYP+Q+ N+ + +A+ + S + WH RL H +LPI+ +L + HSLPV+GS
Sbjct: 247 SEGGLYPIQLXSMSINKSHALSAVVGIKASVSIWHSRLGHASLPIVSQLLNKHSLPVEGS 306
Query: 125 KRLSSLCMACQMG 87
C +CQ+G
Sbjct: 307 VNKMHFCESCQLG 319
>ref|XP_009344802.1| PREDICTED: uncharacterized protein LOC103936680 [Pyrus x
bretschneideri]
Length = 613
Score = 61.2 bits (147), Expect(2) = 7e-09
Identities = 37/127 (29%), Positives = 51/127 (40%), Gaps = 7/127 (5%)
Frame = -1
Query: 368 WCWSCYQPFXXXXXXXXXXXR-----SKNGLYPLQINLFHQNRGS--SPTALASVCVSSN 210
WC + PF + GL+P N + G SP AL V
Sbjct: 462 WCSLTFDPFGFYIMDLRTGKMLFQGPCEGGLHPFYWNASNGISGIAISPHALMIAKVDIT 521
Query: 209 TWHHRLSHPALPIMHRLFSTHSLPVDGSKRLSSLCMACQMGXXXXXXXXXXXSTASKPLE 30
TWH RL HP +H++ + L V G S C CQMG T+++P
Sbjct: 522 TWHRRLRHPFSLALHKVVNKGQLSVVGPLSQKSFCSDCQMGKTSKLSFSTLPCTSTRPFH 581
Query: 29 LIHSDIW 9
L+H+D+W
Sbjct: 582 LVHTDVW 588
Score = 25.4 bits (54), Expect(2) = 7e-09
Identities = 10/20 (50%), Positives = 14/20 (70%)
Frame = -2
Query: 400 YERGDQIAVGNGAGLAINHS 341
Y DQ+ VG+G GL I+H+
Sbjct: 405 YNGTDQLFVGDGKGLCISHT 424