BLASTX nr result
ID: Cinnamomum24_contig00022263
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Cinnamomum24_contig00022263
(590 letters)
Database: ./nr
77,306,371 sequences; 28,104,191,420 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
emb|CAN61508.1| hypothetical protein VITISV_000627 [Vitis vinifera] 102 4e-43
gb|AFW86910.1| putative cytochrome C oxidase subunit II family p... 121 2e-25
tpg|DAA38266.1| TPA: putative cytochrome C oxidase subunit II fa... 99 1e-18
gb|ERM95510.1| hypothetical protein AMTR_s00151p00074930 [Ambore... 82 1e-14
ref|YP_004222255.1| hypothetical protein BevumaM_p016 [Beta vulg... 83 1e-13
tpg|DAA38268.1| TPA: putative cytochrome C oxidase subunit II fa... 73 1e-10
gb|AFW86920.1| LOW QUALITY PROTEIN: putative cytochrome C oxidas... 73 1e-10
gb|EHK62703.1| hypothetical protein M3S_K12 (mitochondrion) [Sor... 73 1e-10
gb|EHK62687.1| hypothetical protein M3S_E08, partial (mitochondr... 73 1e-10
gb|EHK62683.1| hypothetical protein M3S_J74 (mitochondrion) [Sor... 73 1e-10
>emb|CAN61508.1| hypothetical protein VITISV_000627 [Vitis vinifera]
Length = 201
Score = 102 bits (254), Expect(2) = 4e-43
Identities = 46/54 (85%), Positives = 46/54 (85%)
Frame = -2
Query: 268 VAYNFGPNGRPRNLSEWGIPVGNNHGSSCGTTGPGEDNXXXXXXXLRFGDGGPT 107
VAYNFGPNGRP NLSEWGIPVGNNHGSSCGTTGPGEDN LRFGDGGPT
Sbjct: 55 VAYNFGPNGRPSNLSEWGIPVGNNHGSSCGTTGPGEDNLLFLLLFLRFGDGGPT 108
Score = 99.8 bits (247), Expect(2) = 4e-43
Identities = 50/54 (92%), Positives = 52/54 (96%)
Frame = -1
Query: 536 VVREASGLPVISHSRRRETIRTIACQKRGVGVVRPIPRNAPSIGAYGSILVVAG 375
+VREASGLPVISHSRRRET+ TIACQKRGV VVRPIPRNAPSIGAYGSILVVAG
Sbjct: 1 MVREASGLPVISHSRRRETLITIACQKRGVEVVRPIPRNAPSIGAYGSILVVAG 54
>gb|AFW86910.1| putative cytochrome C oxidase subunit II family protein [Zea mays]
Length = 70
Score = 121 bits (304), Expect = 2e-25
Identities = 62/70 (88%), Positives = 63/70 (90%)
Frame = -3
Query: 315 MSDNGAEVVNLSAPQQWHTTLDLTAGPVTFRNGGSPLATTTVVVAELLGRERTTXXXXXS 136
MSDNGA VVNLSAPQQWHTTLDL AGPVTFRNGGSPLATTTVVVAELLG+ERTT S
Sbjct: 1 MSDNGASVVNLSAPQQWHTTLDLRAGPVTFRNGGSPLATTTVVVAELLGQERTTCCSCSS 60
Query: 135 FFASGTEVLR 106
FFASGTEVLR
Sbjct: 61 FFASGTEVLR 70
>tpg|DAA38266.1| TPA: putative cytochrome C oxidase subunit II family protein [Zea
mays]
Length = 510
Score = 99.4 bits (246), Expect = 1e-18
Identities = 47/60 (78%), Positives = 47/60 (78%)
Frame = -2
Query: 277 TTAVAYNFGPNGRPRNLSEWGIPVGNNHGSSCGTTGPGEDNXXXXXXXLRFGDGGPTVGN 98
T AVAYNFGP GRPR LSEWGIPVGNNHGSSCGTTGP EDN LRFGDGG TV N
Sbjct: 357 TGAVAYNFGPKGRPRYLSEWGIPVGNNHGSSCGTTGPREDNLLFLLLLLRFGDGGHTVSN 416
>gb|ERM95510.1| hypothetical protein AMTR_s00151p00074930 [Amborella trichopoda]
Length = 160
Score = 81.6 bits (200), Expect(2) = 1e-14
Identities = 37/51 (72%), Positives = 41/51 (80%)
Frame = -2
Query: 232 NLSEWGIPVGNNHGSSCGTTGPGEDNXXXXXXXLRFGDGGPTVGNSRHKHL 80
+LS+WGIP+GNNHGSSC TTGPGE+N LRFGDGGPTV NSRHK L
Sbjct: 87 DLSKWGIPIGNNHGSSCETTGPGEENQLFLVLCLRFGDGGPTVCNSRHKAL 137
Score = 25.0 bits (53), Expect(2) = 1e-14
Identities = 11/11 (100%), Positives = 11/11 (100%)
Frame = -1
Query: 83 LDRRGPALLLL 51
LDRRGPALLLL
Sbjct: 137 LDRRGPALLLL 147
>ref|YP_004222255.1| hypothetical protein BevumaM_p016 [Beta vulgaris subsp. maritima]
gi|346683133|ref|YP_004842062.1| hypothetical protein
BemaM_p014 [Beta macrocarpa]
gi|317905693|emb|CBX33235.1| hypothetical protein [Beta
vulgaris subsp. maritima] gi|319439773|emb|CBX33287.1|
hypothetical protein [Beta vulgaris subsp. maritima]
gi|320148025|emb|CBJ20690.1| hypothetical protein [Beta
vulgaris subsp. maritima] gi|345500051|emb|CBX24867.1|
hypothetical protein [Beta macrocarpa]
gi|384939217|emb|CBL52063.1| hypothetical protein
(mitochondrion) [Beta vulgaris subsp. maritima]
Length = 178
Score = 82.8 bits (203), Expect = 1e-13
Identities = 40/50 (80%), Positives = 42/50 (84%), Gaps = 3/50 (6%)
Frame = -3
Query: 588 YRSAPPHEGDLSATKCTG---GSRSIWLTGNLPFPSSRDYKNYSMPETGS 448
YRSAP HEGDLSATKC S+SIWLTGNLPFPSSRD+ NYSMPETGS
Sbjct: 129 YRSAPLHEGDLSATKCLKVEYSSQSIWLTGNLPFPSSRDFSNYSMPETGS 178
>tpg|DAA38268.1| TPA: putative cytochrome C oxidase subunit II family protein [Zea
mays]
Length = 354
Score = 72.8 bits (177), Expect = 1e-10
Identities = 33/36 (91%), Positives = 35/36 (97%)
Frame = -3
Query: 588 YRSAPPHEGDLSATKCTGGSRSIWLTGNLPFPSSRD 481
YRSAP +EGDLSATKCTGGSRSIWLTG+LPFPSSRD
Sbjct: 319 YRSAPLNEGDLSATKCTGGSRSIWLTGHLPFPSSRD 354
>gb|AFW86920.1| LOW QUALITY PROTEIN: putative cytochrome C oxidase subunit II
family protein [Zea mays]
Length = 375
Score = 72.8 bits (177), Expect = 1e-10
Identities = 33/36 (91%), Positives = 35/36 (97%)
Frame = -3
Query: 588 YRSAPPHEGDLSATKCTGGSRSIWLTGNLPFPSSRD 481
YRSAP +EGDLSATKCTGGSRSIWLTG+LPFPSSRD
Sbjct: 340 YRSAPLNEGDLSATKCTGGSRSIWLTGHLPFPSSRD 375
>gb|EHK62703.1| hypothetical protein M3S_K12 (mitochondrion) [Sorghum bicolor]
Length = 131
Score = 72.8 bits (177), Expect = 1e-10
Identities = 33/36 (91%), Positives = 35/36 (97%)
Frame = -3
Query: 588 YRSAPPHEGDLSATKCTGGSRSIWLTGNLPFPSSRD 481
YRSAP +EGDLSATKCTGGSRSIWLTG+LPFPSSRD
Sbjct: 96 YRSAPLNEGDLSATKCTGGSRSIWLTGHLPFPSSRD 131
>gb|EHK62687.1| hypothetical protein M3S_E08, partial (mitochondrion) [Sorghum
bicolor]
Length = 158
Score = 72.8 bits (177), Expect = 1e-10
Identities = 33/36 (91%), Positives = 35/36 (97%)
Frame = -3
Query: 588 YRSAPPHEGDLSATKCTGGSRSIWLTGNLPFPSSRD 481
YRSAP +EGDLSATKCTGGSRSIWLTG+LPFPSSRD
Sbjct: 123 YRSAPLNEGDLSATKCTGGSRSIWLTGHLPFPSSRD 158
>gb|EHK62683.1| hypothetical protein M3S_J74 (mitochondrion) [Sorghum bicolor]
Length = 163
Score = 72.8 bits (177), Expect = 1e-10
Identities = 33/36 (91%), Positives = 35/36 (97%)
Frame = -3
Query: 588 YRSAPPHEGDLSATKCTGGSRSIWLTGNLPFPSSRD 481
YRSAP +EGDLSATKCTGGSRSIWLTG+LPFPSSRD
Sbjct: 128 YRSAPLNEGDLSATKCTGGSRSIWLTGHLPFPSSRD 163