BLASTX nr result

ID: Cinnamomum24_contig00022115 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cinnamomum24_contig00022115
         (413 letters)

Database: ./nr 
           77,306,371 sequences; 28,104,191,420 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_010269942.1| PREDICTED: F-box protein At4g22280-like [Nel...    85   2e-14
ref|XP_008799979.1| PREDICTED: F-box/LRR-repeat protein At3g2692...    57   5e-06

>ref|XP_010269942.1| PREDICTED: F-box protein At4g22280-like [Nelumbo nucifera]
           gi|720044611|ref|XP_010269943.1| PREDICTED: F-box
           protein At4g22280-like [Nelumbo nucifera]
           gi|720044614|ref|XP_010269944.1| PREDICTED: F-box
           protein At4g22280-like [Nelumbo nucifera]
           gi|720044617|ref|XP_010269945.1| PREDICTED: F-box
           protein At4g22280-like [Nelumbo nucifera]
          Length = 505

 Score = 85.1 bits (209), Expect = 2e-14
 Identities = 45/117 (38%), Positives = 72/117 (61%), Gaps = 4/117 (3%)
 Frame = +2

Query: 2   LNLPSSVSFTLLKTLCLYALEITGNMFKVLTSGCPLLEDLTLRNCNSQTGLDIFVANPHL 181
           LNLP+S+    LKTLCL A+++  N    LTS CP+LE+L+L++CN    L+I +   HL
Sbjct: 180 LNLPTSIHLRSLKTLCLTAVDLPTNAISALTSNCPVLEELSLKHCNIYLNLNISIPTKHL 239

Query: 182 KRL----EINEYKISGRIEIYAPSLLMIEFTRCMERNDYSSVKKLPSLVSAKFDCNE 340
             L    +++E+     + I  P+LL +E+  C+ R+ Y  +K+L SL+ A+FD  +
Sbjct: 240 NILRIIDQVDEFFDDTEMVIDVPNLLSLEWKGCLLRDKY-HIKRLSSLLKARFDLED 295


>ref|XP_008799979.1| PREDICTED: F-box/LRR-repeat protein At3g26922-like [Phoenix
           dactylifera]
          Length = 303

 Score = 57.0 bits (136), Expect = 5e-06
 Identities = 44/111 (39%), Positives = 60/111 (54%), Gaps = 4/111 (3%)
 Frame = +2

Query: 2   LNLPSSVSFTLLKTLCLYALEITGNMFKVLTSGCPLLEDLTLRNCNSQTGLDIFVANPHL 181
           LNL  S+    L+TL LY + I  ++    TSG PLLE LTL  CNS+  L I+  N  L
Sbjct: 148 LNLLPSLCLGSLRTLKLYHVIIVSDLN---TSGFPLLESLTLYGCNSRKHLSIYSPNHKL 204

Query: 182 KRLEINEYK----ISGRIEIYAPSLLMIEFTRCMERNDYSSVKKLPSLVSA 322
           ++L+I +       SG + I AP L  IE +  M  + Y S+K L S+  A
Sbjct: 205 EKLKICDVSDVLYASGDLIIDAPYLSSIEISGYMRHSGY-SIKNLSSVTHA 254


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