BLASTX nr result
ID: Cinnamomum24_contig00021147
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Cinnamomum24_contig00021147
(516 letters)
Database: ./nr
77,306,371 sequences; 28,104,191,420 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_011627269.1| PREDICTED: DNA-directed RNA polymerase III s... 208 1e-51
ref|XP_006828249.1| PREDICTED: DNA-directed RNA polymerase III s... 208 1e-51
ref|XP_010907843.1| PREDICTED: DNA-directed RNA polymerase III s... 205 9e-51
ref|XP_010265589.1| PREDICTED: DNA-directed RNA polymerase III s... 202 6e-50
ref|XP_008803030.1| PREDICTED: DNA-directed RNA polymerase III s... 199 7e-49
ref|XP_006365152.1| PREDICTED: DNA-directed RNA polymerase III s... 198 1e-48
ref|XP_006365151.1| PREDICTED: DNA-directed RNA polymerase III s... 198 1e-48
ref|XP_009402242.1| PREDICTED: DNA-directed RNA polymerase III s... 196 4e-48
gb|ACJ63310.1| RNA polymerase III large subunit [Liriodendron tu... 195 1e-47
ref|XP_009610319.1| PREDICTED: DNA-directed RNA polymerase III s... 194 2e-47
ref|XP_009610317.1| PREDICTED: DNA-directed RNA polymerase III s... 194 2e-47
ref|XP_004251448.1| PREDICTED: DNA-directed RNA polymerase III s... 193 4e-47
ref|XP_009776544.1| PREDICTED: DNA-directed RNA polymerase III s... 192 8e-47
ref|XP_009800353.1| PREDICTED: DNA-directed RNA polymerase III s... 192 8e-47
ref|XP_009776545.1| PREDICTED: DNA-directed RNA polymerase III s... 191 2e-46
ref|XP_006653556.1| PREDICTED: DNA-directed RNA polymerase III s... 190 3e-46
ref|XP_002446717.1| hypothetical protein SORBIDRAFT_06g021120 [S... 190 3e-46
gb|KQK97866.1| hypothetical protein SETIT_009186mg [Setaria ital... 187 3e-45
ref|XP_004976057.1| PREDICTED: DNA-directed RNA polymerase III s... 187 3e-45
emb|CDP20047.1| unnamed protein product [Coffea canephora] 187 3e-45
>ref|XP_011627269.1| PREDICTED: DNA-directed RNA polymerase III subunit rpc1 isoform X2
[Amborella trichopoda]
Length = 1367
Score = 208 bits (530), Expect = 1e-51
Identities = 110/172 (63%), Positives = 134/172 (77%)
Frame = -1
Query: 516 GMDPAQMEGKSGTPLNLARLFSKIKATCPATGAYPTLFQSDIEQAIDERLSKHDMTLEGG 337
GMDPA+MEGKSG PLNL RLF KIKATCPA+ + +L S+I +++RLSKHDMT E G
Sbjct: 897 GMDPAKMEGKSGVPLNLDRLFMKIKATCPASVS-ASLSPSEISTIVNDRLSKHDMTPERG 955
Query: 336 CLDAFRKSLSDFLCERITKLNNTRRALGLDDDSIQTIKLNEYNLKHVLENVAAKISGISS 157
C AF++ LS+F+ +R+ + TR LGLD+D + K + LE+VAA ISGIS
Sbjct: 956 CSMAFKEELSNFIKKRMDAIKKTRNMLGLDEDCVDKEKFSG------LEHVAANISGISR 1009
Query: 156 RQLQVFLDSCISRYHAKRLEAGTAIGAIGAQSIGEPGTQMTLKTFHFAGVAS 1
+QL+VFL++CISRYH KR+EAGTAIGAIGAQSIGEPGTQMTLKTFHFAGVAS
Sbjct: 1010 QQLRVFLETCISRYHLKRIEAGTAIGAIGAQSIGEPGTQMTLKTFHFAGVAS 1061
>ref|XP_006828249.1| PREDICTED: DNA-directed RNA polymerase III subunit rpc1 isoform X1
[Amborella trichopoda] gi|548832896|gb|ERM95665.1|
hypothetical protein AMTR_s00023p00196820 [Amborella
trichopoda]
Length = 1383
Score = 208 bits (530), Expect = 1e-51
Identities = 110/172 (63%), Positives = 134/172 (77%)
Frame = -1
Query: 516 GMDPAQMEGKSGTPLNLARLFSKIKATCPATGAYPTLFQSDIEQAIDERLSKHDMTLEGG 337
GMDPA+MEGKSG PLNL RLF KIKATCPA+ + +L S+I +++RLSKHDMT E G
Sbjct: 897 GMDPAKMEGKSGVPLNLDRLFMKIKATCPASVS-ASLSPSEISTIVNDRLSKHDMTPERG 955
Query: 336 CLDAFRKSLSDFLCERITKLNNTRRALGLDDDSIQTIKLNEYNLKHVLENVAAKISGISS 157
C AF++ LS+F+ +R+ + TR LGLD+D + K + LE+VAA ISGIS
Sbjct: 956 CSMAFKEELSNFIKKRMDAIKKTRNMLGLDEDCVDKEKFSG------LEHVAANISGISR 1009
Query: 156 RQLQVFLDSCISRYHAKRLEAGTAIGAIGAQSIGEPGTQMTLKTFHFAGVAS 1
+QL+VFL++CISRYH KR+EAGTAIGAIGAQSIGEPGTQMTLKTFHFAGVAS
Sbjct: 1010 QQLRVFLETCISRYHLKRIEAGTAIGAIGAQSIGEPGTQMTLKTFHFAGVAS 1061
>ref|XP_010907843.1| PREDICTED: DNA-directed RNA polymerase III subunit rpc1 [Elaeis
guineensis]
Length = 1369
Score = 205 bits (522), Expect = 9e-51
Identities = 111/172 (64%), Positives = 134/172 (77%)
Frame = -1
Query: 516 GMDPAQMEGKSGTPLNLARLFSKIKATCPATGAYPTLFQSDIEQAIDERLSKHDMTLEGG 337
GMDPA+MEGK G PLNL +LF KI ATCP TL ++I +D+RLSK+DMT EGG
Sbjct: 887 GMDPAKMEGKDGIPLNLDQLFMKIMATCPLR-EQDTLSPAEILHIMDDRLSKYDMTPEGG 945
Query: 336 CLDAFRKSLSDFLCERITKLNNTRRALGLDDDSIQTIKLNEYNLKHVLENVAAKISGISS 157
C +F+K LSDFL +R+ L N RRAL LD++ +Q +Y+ VLE+VAA ISGIS+
Sbjct: 946 CSASFKKMLSDFLHKRVAALCNIRRALQLDENHLQK---QDYS---VLESVAANISGISA 999
Query: 156 RQLQVFLDSCISRYHAKRLEAGTAIGAIGAQSIGEPGTQMTLKTFHFAGVAS 1
+QLQVFL++CISRYH K++EAG AIGAIGAQSIGEPGTQMTLKTFHFAGVAS
Sbjct: 1000 KQLQVFLETCISRYHLKKIEAGGAIGAIGAQSIGEPGTQMTLKTFHFAGVAS 1051
>ref|XP_010265589.1| PREDICTED: DNA-directed RNA polymerase III subunit rpc1 [Nelumbo
nucifera]
Length = 1392
Score = 202 bits (515), Expect = 6e-50
Identities = 103/172 (59%), Positives = 134/172 (77%)
Frame = -1
Query: 516 GMDPAQMEGKSGTPLNLARLFSKIKATCPATGAYPTLFQSDIEQAIDERLSKHDMTLEGG 337
G+DPA MEGK G PLNL R++ K KATCP+ G +L S+I + +D+R+S++DMT +GG
Sbjct: 910 GLDPANMEGKKGIPLNLERVYLKTKATCPS-GTNASLCPSEIVKILDDRISRYDMTPDGG 968
Query: 336 CLDAFRKSLSDFLCERITKLNNTRRALGLDDDSIQTIKLNEYNLKHVLENVAAKISGISS 157
C AF+K L DF+ RI+ L NTR+ALGLD++ + + +LE++AA ISGI++
Sbjct: 969 CSSAFKKLLVDFIQNRISILRNTRKALGLDEEYAKK------DNSDILEHIAANISGITT 1022
Query: 156 RQLQVFLDSCISRYHAKRLEAGTAIGAIGAQSIGEPGTQMTLKTFHFAGVAS 1
+QL+VFL++CISRYH KR+EAG AIGAIGAQSIGEPGTQMTLKTFHFAGVAS
Sbjct: 1023 QQLKVFLETCISRYHLKRIEAGAAIGAIGAQSIGEPGTQMTLKTFHFAGVAS 1074
>ref|XP_008803030.1| PREDICTED: DNA-directed RNA polymerase III subunit rpc1 [Phoenix
dactylifera]
Length = 1018
Score = 199 bits (506), Expect = 7e-49
Identities = 106/172 (61%), Positives = 129/172 (75%)
Frame = -1
Query: 516 GMDPAQMEGKSGTPLNLARLFSKIKATCPATGAYPTLFQSDIEQAIDERLSKHDMTLEGG 337
GMDPA+MEGK G PLNL +LF K+ ATCP TL ++I +D+RLSK+D T EGG
Sbjct: 536 GMDPAKMEGKDGIPLNLDQLFMKVMATCPLR-EQDTLSPAEILHTLDDRLSKYDTTPEGG 594
Query: 336 CLDAFRKSLSDFLCERITKLNNTRRALGLDDDSIQTIKLNEYNLKHVLENVAAKISGISS 157
C AF+K LSDFL + +N RRAL LD++ +Q + VLE+VAA ISGIS+
Sbjct: 595 CSAAFKKMLSDFLHKHAAAFSNIRRALQLDENHVQKKDSS------VLESVAANISGISA 648
Query: 156 RQLQVFLDSCISRYHAKRLEAGTAIGAIGAQSIGEPGTQMTLKTFHFAGVAS 1
+QLQVFL++CI RYH+K++EAG AIGAIGAQSIGEPGTQMTLKTFHFAGVAS
Sbjct: 649 KQLQVFLETCIFRYHSKKIEAGAAIGAIGAQSIGEPGTQMTLKTFHFAGVAS 700
>ref|XP_006365152.1| PREDICTED: DNA-directed RNA polymerase III subunit rpc1-like isoform
X2 [Solanum tuberosum]
Length = 1243
Score = 198 bits (504), Expect = 1e-48
Identities = 108/173 (62%), Positives = 129/173 (74%), Gaps = 1/173 (0%)
Frame = -1
Query: 516 GMDPAQMEGKSGTPLNLARLFSKIKATCPATGAYPTLFQSDIEQAIDERLSKHDMTLEGG 337
GMDP+QME K G PLN +RLF K+KATCP G +L S+I + ++ERLS HDMT EGG
Sbjct: 898 GMDPSQMEEKKGRPLNFSRLFMKVKATCPP-GGEKSLSYSEICEIVNERLSYHDMTPEGG 956
Query: 336 CLDAFRKSLSDFLCERITK-LNNTRRALGLDDDSIQTIKLNEYNLKHVLENVAAKISGIS 160
C +AFR SLSDFL + + + L N R +L L ++ E + + LE +A ISGI+
Sbjct: 957 CSEAFRSSLSDFLIKNLAETLKNLRESLLLGEEQY------EGDDRGYLEKIALNISGIT 1010
Query: 159 SRQLQVFLDSCISRYHAKRLEAGTAIGAIGAQSIGEPGTQMTLKTFHFAGVAS 1
RQLQVFL++CISRYH KRLEAGTAIGAIGAQSIGEPGTQMTLKTFHFAGVAS
Sbjct: 1011 KRQLQVFLNTCISRYHLKRLEAGTAIGAIGAQSIGEPGTQMTLKTFHFAGVAS 1063
>ref|XP_006365151.1| PREDICTED: DNA-directed RNA polymerase III subunit rpc1-like isoform
X1 [Solanum tuberosum]
Length = 1394
Score = 198 bits (504), Expect = 1e-48
Identities = 108/173 (62%), Positives = 129/173 (74%), Gaps = 1/173 (0%)
Frame = -1
Query: 516 GMDPAQMEGKSGTPLNLARLFSKIKATCPATGAYPTLFQSDIEQAIDERLSKHDMTLEGG 337
GMDP+QME K G PLN +RLF K+KATCP G +L S+I + ++ERLS HDMT EGG
Sbjct: 898 GMDPSQMEEKKGRPLNFSRLFMKVKATCPP-GGEKSLSYSEICEIVNERLSYHDMTPEGG 956
Query: 336 CLDAFRKSLSDFLCERITK-LNNTRRALGLDDDSIQTIKLNEYNLKHVLENVAAKISGIS 160
C +AFR SLSDFL + + + L N R +L L ++ E + + LE +A ISGI+
Sbjct: 957 CSEAFRSSLSDFLIKNLAETLKNLRESLLLGEEQY------EGDDRGYLEKIALNISGIT 1010
Query: 159 SRQLQVFLDSCISRYHAKRLEAGTAIGAIGAQSIGEPGTQMTLKTFHFAGVAS 1
RQLQVFL++CISRYH KRLEAGTAIGAIGAQSIGEPGTQMTLKTFHFAGVAS
Sbjct: 1011 KRQLQVFLNTCISRYHLKRLEAGTAIGAIGAQSIGEPGTQMTLKTFHFAGVAS 1063
>ref|XP_009402242.1| PREDICTED: DNA-directed RNA polymerase III subunit rpc1 [Musa
acuminata subsp. malaccensis]
Length = 1372
Score = 196 bits (499), Expect = 4e-48
Identities = 103/172 (59%), Positives = 132/172 (76%)
Frame = -1
Query: 516 GMDPAQMEGKSGTPLNLARLFSKIKATCPATGAYPTLFQSDIEQAIDERLSKHDMTLEGG 337
GMDPA+MEGK G PLN+ +LF K+ ATCP + L ++ + +D+RL+K+DM+ EGG
Sbjct: 890 GMDPAKMEGKDGIPLNMDQLFMKVMATCPPR-EHDMLSPTEALRIMDDRLAKYDMSPEGG 948
Query: 336 CLDAFRKSLSDFLCERITKLNNTRRALGLDDDSIQTIKLNEYNLKHVLENVAAKISGISS 157
C AF+K LSDF+ +R++ L N R++L LD+ + VLENVAAKISGISS
Sbjct: 949 CSAAFKKLLSDFVHKRVSALANMRKSLKLDETDMGRKDST------VLENVAAKISGISS 1002
Query: 156 RQLQVFLDSCISRYHAKRLEAGTAIGAIGAQSIGEPGTQMTLKTFHFAGVAS 1
+QL+VFL++CISRYH+K++EAG AIGAIGAQSIGEPGTQMTLKTFHFAGVAS
Sbjct: 1003 KQLEVFLETCISRYHSKKVEAGAAIGAIGAQSIGEPGTQMTLKTFHFAGVAS 1054
>gb|ACJ63310.1| RNA polymerase III large subunit [Liriodendron tulipifera]
Length = 546
Score = 195 bits (496), Expect = 1e-47
Identities = 103/157 (65%), Positives = 120/157 (76%)
Frame = -1
Query: 516 GMDPAQMEGKSGTPLNLARLFSKIKATCPATGAYPTLFQSDIEQAIDERLSKHDMTLEGG 337
GMDPA MEGK G PLNL RLF K KAT PAT A+ +L S+I +A D+RLSKHDMT EGG
Sbjct: 399 GMDPANMEGKEGMPLNLDRLFMKTKATFPATRAHTSLSPSEILKAADDRLSKHDMTPEGG 458
Query: 336 CLDAFRKSLSDFLCERITKLNNTRRALGLDDDSIQTIKLNEYNLKHVLENVAAKISGISS 157
C AF++SLSDFL + + L TRR LGLD+D ++ +HVLENVAA ISGI+S
Sbjct: 459 CSAAFKESLSDFLKKCVVALRKTRRELGLDEDKVR---------EHVLENVAANISGITS 509
Query: 156 RQLQVFLDSCISRYHAKRLEAGTAIGAIGAQSIGEPG 46
+QLQVFL++CI RYH KRLEAG AIGAIGAQSIGEPG
Sbjct: 510 QQLQVFLETCIHRYHLKRLEAGAAIGAIGAQSIGEPG 546
>ref|XP_009610319.1| PREDICTED: DNA-directed RNA polymerase III subunit rpc1 isoform X2
[Nicotiana tomentosiformis]
gi|697112874|ref|XP_009610320.1| PREDICTED: DNA-directed
RNA polymerase III subunit rpc1 isoform X2 [Nicotiana
tomentosiformis]
Length = 1375
Score = 194 bits (494), Expect = 2e-47
Identities = 106/173 (61%), Positives = 126/173 (72%), Gaps = 1/173 (0%)
Frame = -1
Query: 516 GMDPAQMEGKSGTPLNLARLFSKIKATCPATGAYPTLFQSDIEQAIDERLSKHDMTLEGG 337
GMDP+QME K G PLN +RLF K+KATCP G +L S+I + ++ERLS HDM+ EGG
Sbjct: 899 GMDPSQMEEKKGRPLNFSRLFMKVKATCPPRGE-KSLSYSEICEIVNERLSYHDMSPEGG 957
Query: 336 CLDAFRKSLSDFLCERITK-LNNTRRALGLDDDSIQTIKLNEYNLKHVLENVAAKISGIS 160
C +AFR SLSDFL + + + L R AL LD + + LEN+A ISGI+
Sbjct: 958 CSEAFRASLSDFLIKHLAETLKRLREALLLDGEQYAG------GDREYLENIALNISGIT 1011
Query: 159 SRQLQVFLDSCISRYHAKRLEAGTAIGAIGAQSIGEPGTQMTLKTFHFAGVAS 1
+QLQVFL+ CISRYH KRLE+GTAIGAIGAQSIGEPGTQMTLKTFHFAGVAS
Sbjct: 1012 KKQLQVFLNMCISRYHLKRLESGTAIGAIGAQSIGEPGTQMTLKTFHFAGVAS 1064
>ref|XP_009610317.1| PREDICTED: DNA-directed RNA polymerase III subunit rpc1 isoform X1
[Nicotiana tomentosiformis]
gi|697112870|ref|XP_009610318.1| PREDICTED: DNA-directed
RNA polymerase III subunit rpc1 isoform X1 [Nicotiana
tomentosiformis]
Length = 1390
Score = 194 bits (494), Expect = 2e-47
Identities = 106/173 (61%), Positives = 126/173 (72%), Gaps = 1/173 (0%)
Frame = -1
Query: 516 GMDPAQMEGKSGTPLNLARLFSKIKATCPATGAYPTLFQSDIEQAIDERLSKHDMTLEGG 337
GMDP+QME K G PLN +RLF K+KATCP G +L S+I + ++ERLS HDM+ EGG
Sbjct: 899 GMDPSQMEEKKGRPLNFSRLFMKVKATCPPRGE-KSLSYSEICEIVNERLSYHDMSPEGG 957
Query: 336 CLDAFRKSLSDFLCERITK-LNNTRRALGLDDDSIQTIKLNEYNLKHVLENVAAKISGIS 160
C +AFR SLSDFL + + + L R AL LD + + LEN+A ISGI+
Sbjct: 958 CSEAFRASLSDFLIKHLAETLKRLREALLLDGEQYAG------GDREYLENIALNISGIT 1011
Query: 159 SRQLQVFLDSCISRYHAKRLEAGTAIGAIGAQSIGEPGTQMTLKTFHFAGVAS 1
+QLQVFL+ CISRYH KRLE+GTAIGAIGAQSIGEPGTQMTLKTFHFAGVAS
Sbjct: 1012 KKQLQVFLNMCISRYHLKRLESGTAIGAIGAQSIGEPGTQMTLKTFHFAGVAS 1064
>ref|XP_004251448.1| PREDICTED: DNA-directed RNA polymerase III subunit rpc1 [Solanum
lycopersicum]
Length = 1390
Score = 193 bits (491), Expect = 4e-47
Identities = 105/173 (60%), Positives = 128/173 (73%), Gaps = 1/173 (0%)
Frame = -1
Query: 516 GMDPAQMEGKSGTPLNLARLFSKIKATCPATGAYPTLFQSDIEQAIDERLSKHDMTLEGG 337
GMDP++ME K G PLN +RLF K+KATCP G +L S+I + ++ERLS HDMT EGG
Sbjct: 898 GMDPSRMEEKKGRPLNFSRLFMKVKATCPP-GGEKSLSYSEICEIVNERLSYHDMTPEGG 956
Query: 336 CLDAFRKSLSDFLCERITK-LNNTRRALGLDDDSIQTIKLNEYNLKHVLENVAAKISGIS 160
C +AFR SLSDFL + + + L N R +L L ++ E + + LE + ISGI+
Sbjct: 957 CSEAFRASLSDFLIKSLAETLKNLRESLLLGEEQY------EGDDRGYLEKIVLNISGIT 1010
Query: 159 SRQLQVFLDSCISRYHAKRLEAGTAIGAIGAQSIGEPGTQMTLKTFHFAGVAS 1
+QLQVFL++CISRYH KRLEAGTAIGAIGAQSIGEPGTQMTLKTFHFAGVAS
Sbjct: 1011 KKQLQVFLNTCISRYHLKRLEAGTAIGAIGAQSIGEPGTQMTLKTFHFAGVAS 1063
>ref|XP_009776544.1| PREDICTED: DNA-directed RNA polymerase III subunit RPC1-like
[Nicotiana sylvestris]
Length = 256
Score = 192 bits (488), Expect = 8e-47
Identities = 106/173 (61%), Positives = 125/173 (72%), Gaps = 1/173 (0%)
Frame = -1
Query: 516 GMDPAQMEGKSGTPLNLARLFSKIKATCPATGAYPTLFQSDIEQAIDERLSKHDMTLEGG 337
GMDP+QME K G PLN +RLF K+KATCP G L S+I + ++ERLS HDM+ EGG
Sbjct: 6 GMDPSQMEEKKGRPLNFSRLFMKVKATCPPRGE-KGLSYSEICEIVNERLSYHDMSPEGG 64
Query: 336 CLDAFRKSLSDFLCERITK-LNNTRRALGLDDDSIQTIKLNEYNLKHVLENVAAKISGIS 160
C +AFR SLSDFL + + + L R AL L ++ + LENVA ISGI+
Sbjct: 65 CSEAFRASLSDFLIKNLAETLKRLREALLLGEEQYAG------GDREYLENVALNISGIT 118
Query: 159 SRQLQVFLDSCISRYHAKRLEAGTAIGAIGAQSIGEPGTQMTLKTFHFAGVAS 1
+QLQVFL+ CISRYH KRLE+GTAIGAIGAQSIGEPGTQMTLKTFHFAGVAS
Sbjct: 119 KKQLQVFLNMCISRYHLKRLESGTAIGAIGAQSIGEPGTQMTLKTFHFAGVAS 171
>ref|XP_009800353.1| PREDICTED: DNA-directed RNA polymerase III subunit rpc1 [Nicotiana
sylvestris] gi|698510366|ref|XP_009800354.1| PREDICTED:
DNA-directed RNA polymerase III subunit rpc1 [Nicotiana
sylvestris]
Length = 1390
Score = 192 bits (488), Expect = 8e-47
Identities = 106/173 (61%), Positives = 125/173 (72%), Gaps = 1/173 (0%)
Frame = -1
Query: 516 GMDPAQMEGKSGTPLNLARLFSKIKATCPATGAYPTLFQSDIEQAIDERLSKHDMTLEGG 337
GMDP+QME K G PLN +RLF K+KATCP G L S+I + ++ERLS HDM+ EGG
Sbjct: 899 GMDPSQMEEKKGRPLNFSRLFMKVKATCPPRGE-KGLSYSEICEIVNERLSYHDMSPEGG 957
Query: 336 CLDAFRKSLSDFLCERITK-LNNTRRALGLDDDSIQTIKLNEYNLKHVLENVAAKISGIS 160
C +AFR SLSDFL + + + L R AL L ++ + LENVA ISGI+
Sbjct: 958 CSEAFRASLSDFLIKNLAETLKRLREALLLGEEQYAG------GDREYLENVALNISGIT 1011
Query: 159 SRQLQVFLDSCISRYHAKRLEAGTAIGAIGAQSIGEPGTQMTLKTFHFAGVAS 1
+QLQVFL+ CISRYH KRLE+GTAIGAIGAQSIGEPGTQMTLKTFHFAGVAS
Sbjct: 1012 KKQLQVFLNMCISRYHLKRLESGTAIGAIGAQSIGEPGTQMTLKTFHFAGVAS 1064
>ref|XP_009776545.1| PREDICTED: DNA-directed RNA polymerase III subunit RPC1-like,
partial [Nicotiana sylvestris]
Length = 462
Score = 191 bits (485), Expect = 2e-46
Identities = 106/173 (61%), Positives = 124/173 (71%), Gaps = 1/173 (0%)
Frame = -1
Query: 516 GMDPAQMEGKSGTPLNLARLFSKIKATCPATGAYPTLFQSDIEQAIDERLSKHDMTLEGG 337
GMDP+QME K G PLN +RLF K+KATCP G L S+I + ++ERLS HDM+ EGG
Sbjct: 243 GMDPSQMEEKKGRPLNFSRLFMKVKATCPPRGE-KGLSYSEICEIVNERLSYHDMSPEGG 301
Query: 336 CLDAFRKSLSDFLCERITK-LNNTRRALGLDDDSIQTIKLNEYNLKHVLENVAAKISGIS 160
C +AFR SLSDFL + + + L R AL L + + LENVA ISGI+
Sbjct: 302 CSEAFRASLSDFLIKNLAETLKRLREALLLGGEQYAG------GDREYLENVALNISGIT 355
Query: 159 SRQLQVFLDSCISRYHAKRLEAGTAIGAIGAQSIGEPGTQMTLKTFHFAGVAS 1
+QLQVFL+ CISRYH KRLE+GTAIGAIGAQSIGEPGTQMTLKTFHFAGVAS
Sbjct: 356 KKQLQVFLNMCISRYHLKRLESGTAIGAIGAQSIGEPGTQMTLKTFHFAGVAS 408
>ref|XP_006653556.1| PREDICTED: DNA-directed RNA polymerase III subunit rpc1-like [Oryza
brachyantha]
Length = 1389
Score = 190 bits (483), Expect = 3e-46
Identities = 99/172 (57%), Positives = 129/172 (75%)
Frame = -1
Query: 516 GMDPAQMEGKSGTPLNLARLFSKIKATCPATGAYPTLFQSDIEQAIDERLSKHDMTLEGG 337
GMDPA+MEG+ G PLNL +LF K+ ATCP G TL +I Q ++++LS+HD + + G
Sbjct: 908 GMDPAKMEGEDGKPLNLDQLFMKVMATCPQRGQN-TLSPGEILQILNDKLSEHDASSDDG 966
Query: 336 CLDAFRKSLSDFLCERITKLNNTRRALGLDDDSIQTIKLNEYNLKHVLENVAAKISGISS 157
C + F++ L DFL +RI L +TRRAL LD++ + E E++AA ISGIS+
Sbjct: 967 CSEKFKQLLKDFLEDRIKLLKSTRRALCLDENHVGKDSSIE-------ESIAANISGISA 1019
Query: 156 RQLQVFLDSCISRYHAKRLEAGTAIGAIGAQSIGEPGTQMTLKTFHFAGVAS 1
+QLQVFLD+C+SRYH+K++EAG +IGAIGAQSIGEPGTQMTLKTFHFAGVAS
Sbjct: 1020 KQLQVFLDTCLSRYHSKKIEAGASIGAIGAQSIGEPGTQMTLKTFHFAGVAS 1071
>ref|XP_002446717.1| hypothetical protein SORBIDRAFT_06g021120 [Sorghum bicolor]
gi|241937900|gb|EES11045.1| hypothetical protein
SORBIDRAFT_06g021120 [Sorghum bicolor]
Length = 1391
Score = 190 bits (483), Expect = 3e-46
Identities = 100/172 (58%), Positives = 130/172 (75%)
Frame = -1
Query: 516 GMDPAQMEGKSGTPLNLARLFSKIKATCPATGAYPTLFQSDIEQAIDERLSKHDMTLEGG 337
GMDPA+MEGK G PLNL +LF K+ ATCP G+ TL I+Q ++++L +HD + +GG
Sbjct: 904 GMDPAKMEGKDGMPLNLDQLFMKVMATCPQRGS-DTLSPEAIKQMLEDKLLQHDTSSDGG 962
Query: 336 CLDAFRKSLSDFLCERITKLNNTRRALGLDDDSIQTIKLNEYNLKHVLENVAAKISGISS 157
C + F+K+L++FL +RI + TRRAL L +D + E V E+VAA ISGIS+
Sbjct: 963 CSEEFKKNLTEFLDKRIELMKCTRRALHLHEDHV------EKKDSCVEESVAAIISGISA 1016
Query: 156 RQLQVFLDSCISRYHAKRLEAGTAIGAIGAQSIGEPGTQMTLKTFHFAGVAS 1
+QLQVFLD+C+SRY +K++EAG +IGAIGAQSIGEPGTQMTLKTFHFAGVAS
Sbjct: 1017 KQLQVFLDTCLSRYQSKKIEAGASIGAIGAQSIGEPGTQMTLKTFHFAGVAS 1068
>gb|KQK97866.1| hypothetical protein SETIT_009186mg [Setaria italica]
Length = 1394
Score = 187 bits (475), Expect = 3e-45
Identities = 99/172 (57%), Positives = 126/172 (73%)
Frame = -1
Query: 516 GMDPAQMEGKSGTPLNLARLFSKIKATCPATGAYPTLFQSDIEQAIDERLSKHDMTLEGG 337
GMDPA+MEGK GTPLNL +LF K+ ATCP G TL DI+Q ++++L++H + +GG
Sbjct: 907 GMDPAKMEGKDGTPLNLDQLFMKVTATCPHRGL-DTLSPDDIKQMLEDKLTQHKTSSDGG 965
Query: 336 CLDAFRKSLSDFLCERITKLNNTRRALGLDDDSIQTIKLNEYNLKHVLENVAAKISGISS 157
C + F++ L FL ERI L TR+AL LD+ + N + E +AA ISGIS+
Sbjct: 966 CSEEFKECLKKFLEERIQLLKCTRKALHLDEKHVGK------NDSCIEEIIAANISGISA 1019
Query: 156 RQLQVFLDSCISRYHAKRLEAGTAIGAIGAQSIGEPGTQMTLKTFHFAGVAS 1
+QLQVFLD+C SRY++K +EAG +IGAIGAQSIGEPGTQMTLKTFHFAGVAS
Sbjct: 1020 KQLQVFLDTCFSRYNSKAIEAGASIGAIGAQSIGEPGTQMTLKTFHFAGVAS 1071
>ref|XP_004976057.1| PREDICTED: DNA-directed RNA polymerase III subunit rpc1 [Setaria
italica]
Length = 1397
Score = 187 bits (475), Expect = 3e-45
Identities = 99/172 (57%), Positives = 126/172 (73%)
Frame = -1
Query: 516 GMDPAQMEGKSGTPLNLARLFSKIKATCPATGAYPTLFQSDIEQAIDERLSKHDMTLEGG 337
GMDPA+MEGK GTPLNL +LF K+ ATCP G TL DI+Q ++++L++H + +GG
Sbjct: 910 GMDPAKMEGKDGTPLNLDQLFMKVTATCPHRGL-DTLSPDDIKQMLEDKLTQHKTSSDGG 968
Query: 336 CLDAFRKSLSDFLCERITKLNNTRRALGLDDDSIQTIKLNEYNLKHVLENVAAKISGISS 157
C + F++ L FL ERI L TR+AL LD+ + N + E +AA ISGIS+
Sbjct: 969 CSEEFKECLKKFLEERIQLLKCTRKALHLDEKHVGK------NDSCIEEIIAANISGISA 1022
Query: 156 RQLQVFLDSCISRYHAKRLEAGTAIGAIGAQSIGEPGTQMTLKTFHFAGVAS 1
+QLQVFLD+C SRY++K +EAG +IGAIGAQSIGEPGTQMTLKTFHFAGVAS
Sbjct: 1023 KQLQVFLDTCFSRYNSKAIEAGASIGAIGAQSIGEPGTQMTLKTFHFAGVAS 1074
>emb|CDP20047.1| unnamed protein product [Coffea canephora]
Length = 611
Score = 187 bits (474), Expect = 3e-45
Identities = 103/172 (59%), Positives = 124/172 (72%)
Frame = -1
Query: 516 GMDPAQMEGKSGTPLNLARLFSKIKATCPATGAYPTLFQSDIEQAIDERLSKHDMTLEGG 337
GMDP+QME KSG PLN RL K+KATCPA G +L SDI + DERLS+ D T EGG
Sbjct: 394 GMDPSQMEEKSGHPLNFDRLLMKVKATCPA-GDQKSLSPSDICKKTDERLSERDTTPEGG 452
Query: 336 CLDAFRKSLSDFLCERITKLNNTRRALGLDDDSIQTIKLNEYNLKHVLENVAAKISGISS 157
C +AFR SLS FL ++ + N + +I+++K E + EN+++ ISG +S
Sbjct: 453 CSEAFRDSLSKFL--KVKCVQNLEK-------TIESLKAQEEDHNSSFENISSNISGFTS 503
Query: 156 RQLQVFLDSCISRYHAKRLEAGTAIGAIGAQSIGEPGTQMTLKTFHFAGVAS 1
RQL+VFL CISRYH KR+EAGTAIGAIGAQSIGEPGTQMTLKTFHFAGVAS
Sbjct: 504 RQLEVFLRVCISRYHTKRVEAGTAIGAIGAQSIGEPGTQMTLKTFHFAGVAS 555