BLASTX nr result

ID: Cinnamomum24_contig00021122 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cinnamomum24_contig00021122
         (627 letters)

Database: ./nr 
           77,306,371 sequences; 28,104,191,420 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_010278247.1| PREDICTED: ATP-dependent RNA helicase DBP3 [...    79   2e-12
ref|XP_011024273.1| PREDICTED: DEAD-box ATP-dependent RNA helica...    77   1e-11
ref|XP_006851750.1| PREDICTED: DEAD-box ATP-dependent RNA helica...    75   2e-11
gb|KHN24383.1| Pre-mRNA-processing ATP-dependent RNA helicase pr...    74   9e-11
ref|XP_003519029.1| PREDICTED: pre-mRNA-processing ATP-dependent...    74   9e-11
ref|XP_010912223.1| PREDICTED: LOW QUALITY PROTEIN: DEAD-box ATP...    71   4e-10
ref|XP_002530895.1| dead box ATP-dependent RNA helicase, putativ...    71   4e-10
ref|XP_012455566.1| PREDICTED: ATP-dependent RNA helicase DBP3 [...    69   2e-09
ref|XP_007145518.1| hypothetical protein PHAVU_007G245100g [Phas...    69   2e-09
ref|XP_008804384.1| PREDICTED: ATP-dependent RNA helicase DBP2 [...    69   2e-09
ref|XP_002315356.2| hypothetical protein POPTR_0010s24020g [Popu...    69   3e-09
ref|XP_006492170.1| PREDICTED: DEAD-box ATP-dependent RNA helica...    67   6e-09
ref|XP_006436687.1| hypothetical protein CICLE_v10033771mg, part...    67   6e-09
gb|KDO40535.1| hypothetical protein CISIN_1g0082352mg, partial [...    67   8e-09
gb|KJB73411.1| hypothetical protein B456_011G232400 [Gossypium r...    65   2e-08
ref|XP_009335126.1| PREDICTED: ATP-dependent RNA helicase DBP3-l...    65   2e-08
ref|XP_009335122.1| PREDICTED: ATP-dependent RNA helicase DBP3-l...    65   2e-08
ref|XP_003590262.1| DEAD-box helicase family protein [Medicago t...    65   2e-08
ref|XP_007010194.1| P-loop containing nucleoside triphosphate hy...    65   3e-08
ref|XP_004491931.1| PREDICTED: pre-mRNA-processing ATP-dependent...    65   4e-08

>ref|XP_010278247.1| PREDICTED: ATP-dependent RNA helicase DBP3 [Nelumbo nucifera]
          Length = 571

 Score = 79.0 bits (193), Expect = 2e-12
 Identities = 42/92 (45%), Positives = 54/92 (58%)
 Frame = -1

Query: 588 SSEKGVAVSVMDKDHMSMCQNXXXXXXXXXVDFPSIDDYTGILTKMARHSVDGAMHIFLH 409
           +SEK + VSV  K+H+                 PSID YT ILT+MARHSV+G +H  L 
Sbjct: 475 NSEKSMVVSVSVKEHVGSMDIEDFEVAIIVDFLPSIDGYTEILTRMARHSVNGVLHSLLC 534

Query: 408 EADVLSAVPLIKLLEQCSQPVPETLKNCLNSS 313
           E D     PLI++LEQC Q VPE L+N  +S+
Sbjct: 535 EEDAPVVKPLIEILEQCGQAVPEALRNMYDST 566


>ref|XP_011024273.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 5 [Populus
           euphratica]
          Length = 555

 Score = 76.6 bits (187), Expect = 1e-11
 Identities = 41/98 (41%), Positives = 59/98 (60%)
 Frame = -1

Query: 603 SCINLSSEKGVAVSVMDKDHMSMCQNXXXXXXXXXVDFPSIDDYTGILTKMARHSVDGAM 424
           S ++++  K   VSV++ +H+S                PSID+Y  ILT+MARHS++G  
Sbjct: 454 SSLDMNIRKKPVVSVINVEHISTTNLAFCETVILPNFVPSIDNYVQILTRMARHSINGNF 513

Query: 423 HIFLHEADVLSAVPLIKLLEQCSQPVPETLKNCLNSSS 310
           H FL + D L A PL+ +LEQC Q VPE L+N  ++SS
Sbjct: 514 HSFLTKEDALVARPLMGILEQCGQVVPEALRNLHHTSS 551


>ref|XP_006851750.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 20 [Amborella
           trichopoda] gi|548855330|gb|ERN13217.1| hypothetical
           protein AMTR_s00040p00223590 [Amborella trichopoda]
          Length = 566

 Score = 75.5 bits (184), Expect = 2e-11
 Identities = 42/100 (42%), Positives = 60/100 (60%), Gaps = 1/100 (1%)
 Frame = -1

Query: 594 NLSSEKGVAVSVMDKDHMSMCQNXXXXXXXXXVDFPS-IDDYTGILTKMARHSVDGAMHI 418
           +LSSEKGV VSV DKD +   ++          DFPS I++Y  IL+KM  H + G ++ 
Sbjct: 466 SLSSEKGVVVSVTDKDSIGRTEDIGVFQTIFFYDFPSSIEEYVEILSKMETHLIKGVIYS 525

Query: 417 FLHEADVLSAVPLIKLLEQCSQPVPETLKNCLNSSSAMLE 298
                D   A PLIK++EQ +QPVPETLK   +++S + +
Sbjct: 526 LCSGVDAPLAKPLIKVMEQHAQPVPETLKMLSDAASVVFK 565


>gb|KHN24383.1| Pre-mRNA-processing ATP-dependent RNA helicase prp5 [Glycine soja]
          Length = 564

 Score = 73.6 bits (179), Expect = 9e-11
 Identities = 44/98 (44%), Positives = 58/98 (59%)
 Frame = -1

Query: 591 LSSEKGVAVSVMDKDHMSMCQNXXXXXXXXXVDFPSIDDYTGILTKMARHSVDGAMHIFL 412
           + S++  AVS++D   +S                PSID Y  ILTKMAR SV+G +H FL
Sbjct: 467 VDSDRRAAVSLIDLVQISTTDIGTYDVVVLPSFVPSIDTYVHILTKMARTSVNGVLHSFL 526

Query: 411 HEADVLSAVPLIKLLEQCSQPVPETLKNCLNSSSAMLE 298
            + D   A PLI +LEQC Q VP+TL++ LN +S MLE
Sbjct: 527 TKRDTELAAPLIAVLEQCGQEVPQTLQD-LNHTSNMLE 563


>ref|XP_003519029.1| PREDICTED: pre-mRNA-processing ATP-dependent RNA helicase prp5-like
           [Glycine max] gi|947123528|gb|KRH71734.1| hypothetical
           protein GLYMA_02G165400 [Glycine max]
          Length = 563

 Score = 73.6 bits (179), Expect = 9e-11
 Identities = 44/98 (44%), Positives = 58/98 (59%)
 Frame = -1

Query: 591 LSSEKGVAVSVMDKDHMSMCQNXXXXXXXXXVDFPSIDDYTGILTKMARHSVDGAMHIFL 412
           + S++  AVS++D   +S                PSID Y  ILTKMAR SV+G +H FL
Sbjct: 466 VDSDRRAAVSLIDLVQISTTDIGTYDVVVLPSFVPSIDTYVHILTKMARTSVNGVLHSFL 525

Query: 411 HEADVLSAVPLIKLLEQCSQPVPETLKNCLNSSSAMLE 298
            + D   A PLI +LEQC Q VP+TL++ LN +S MLE
Sbjct: 526 TKRDTELAAPLIAVLEQCGQEVPQTLQD-LNHTSNMLE 562


>ref|XP_010912223.1| PREDICTED: LOW QUALITY PROTEIN: DEAD-box ATP-dependent RNA helicase
           20 [Elaeis guineensis]
          Length = 528

 Score = 71.2 bits (173), Expect = 4e-10
 Identities = 38/86 (44%), Positives = 54/86 (62%)
 Frame = -1

Query: 585 SEKGVAVSVMDKDHMSMCQNXXXXXXXXXVDFPSIDDYTGILTKMARHSVDGAMHIFLHE 406
           SEK   V+V DK+++ +  +         VD PS++DY  ILT++ARHSV G +H F  +
Sbjct: 440 SEKVTKVTVKDKENI-LKADMEEFEIVMFVDLPSVEDYVEILTRIARHSVTGVLHSFFRK 498

Query: 405 ADVLSAVPLIKLLEQCSQPVPETLKN 328
           AD   + PLI +LEQC Q VPE L++
Sbjct: 499 ADAPLSQPLINVLEQCGQMVPEVLRS 524


>ref|XP_002530895.1| dead box ATP-dependent RNA helicase, putative [Ricinus communis]
           gi|223529548|gb|EEF31501.1| dead box ATP-dependent RNA
           helicase, putative [Ricinus communis]
          Length = 493

 Score = 71.2 bits (173), Expect = 4e-10
 Identities = 41/99 (41%), Positives = 57/99 (57%)
 Frame = -1

Query: 594 NLSSEKGVAVSVMDKDHMSMCQNXXXXXXXXXVDFPSIDDYTGILTKMARHSVDGAMHIF 415
           N+ +     VSV++ +H+S                 SID+Y  ILT+MARH+  G +H F
Sbjct: 396 NVDTRMKPVVSVINAEHISTADLGVYEIIILPNFVLSIDNYIQILTRMARHTTHGILHSF 455

Query: 414 LHEADVLSAVPLIKLLEQCSQPVPETLKNCLNSSSAMLE 298
           + E D L A PLI++LEQC Q VPETL+  L+  S+M E
Sbjct: 456 MTEEDALLAGPLIEILEQCGQAVPETLRT-LHLRSSMSE 493


>ref|XP_012455566.1| PREDICTED: ATP-dependent RNA helicase DBP3 [Gossypium raimondii]
           gi|763806471|gb|KJB73409.1| hypothetical protein
           B456_011G232200 [Gossypium raimondii]
          Length = 558

 Score = 69.3 bits (168), Expect = 2e-09
 Identities = 39/81 (48%), Positives = 52/81 (64%), Gaps = 1/81 (1%)
 Frame = -1

Query: 567 VSVMDKDHMSMCQNXXXXXXXXXVDFP-SIDDYTGILTKMARHSVDGAMHIFLHEADVLS 391
           VS+MD +++S C +          DF  SIDDY  ILT+MARH+V+G +H FL + D   
Sbjct: 478 VSIMDTENIS-CTDLGEYGVVIIPDFVLSIDDYLQILTRMARHTVNGVLHSFLTKDDSQH 536

Query: 390 AVPLIKLLEQCSQPVPETLKN 328
           A PLI++LEQC Q V E L+N
Sbjct: 537 AGPLIEILEQCGQEVAEELRN 557


>ref|XP_007145518.1| hypothetical protein PHAVU_007G245100g [Phaseolus vulgaris]
           gi|561018708|gb|ESW17512.1| hypothetical protein
           PHAVU_007G245100g [Phaseolus vulgaris]
          Length = 564

 Score = 69.3 bits (168), Expect = 2e-09
 Identities = 43/108 (39%), Positives = 60/108 (55%)
 Frame = -1

Query: 621 DSQGVASCINLSSEKGVAVSVMDKDHMSMCQNXXXXXXXXXVDFPSIDDYTGILTKMARH 442
           DS   +   ++ S+    VS +  DH+S                PSID Y  ILTKMAR 
Sbjct: 457 DSDSASLNDSVDSDSKPVVSAIALDHISTTDIGTYDAVILPNFVPSIDTYVHILTKMARQ 516

Query: 441 SVDGAMHIFLHEADVLSAVPLIKLLEQCSQPVPETLKNCLNSSSAMLE 298
           SV+G ++ FL + D   A PLI +LEQC Q VP++L++ L+ SS M+E
Sbjct: 517 SVNGVLYSFLTKRDTELASPLITVLEQCGQEVPQSLQD-LHHSSNMVE 563


>ref|XP_008804384.1| PREDICTED: ATP-dependent RNA helicase DBP2 [Phoenix dactylifera]
          Length = 511

 Score = 68.9 bits (167), Expect = 2e-09
 Identities = 42/95 (44%), Positives = 59/95 (62%), Gaps = 2/95 (2%)
 Frame = -1

Query: 606 ASCINLS-SEKGVAVSVMDKDHMSMCQNXXXXXXXXXVDFPS-IDDYTGILTKMARHSVD 433
           + C+ +S SEK   V+V DK+++ +  +         VD PS I+DY  ILT++ARHSV 
Sbjct: 414 SDCVIISDSEKVTKVTVKDKENV-LKADVEEFEIVLFVDLPSSIEDYVEILTRIARHSVT 472

Query: 432 GAMHIFLHEADVLSAVPLIKLLEQCSQPVPETLKN 328
           G +H F  EAD   + PLI +LEQC Q VPE L++
Sbjct: 473 GVLHSFFCEADAPLSQPLINVLEQCGQMVPEVLRS 507


>ref|XP_002315356.2| hypothetical protein POPTR_0010s24020g [Populus trichocarpa]
           gi|550330484|gb|EEF01527.2| hypothetical protein
           POPTR_0010s24020g [Populus trichocarpa]
          Length = 491

 Score = 68.6 bits (166), Expect = 3e-09
 Identities = 34/60 (56%), Positives = 42/60 (70%)
 Frame = -1

Query: 489 PSIDDYTGILTKMARHSVDGAMHIFLHEADVLSAVPLIKLLEQCSQPVPETLKNCLNSSS 310
           PSID+Y  ILT+MARHS+ G  H FL + D L A PL+ +LEQC Q VPE L+N   +SS
Sbjct: 428 PSIDNYVQILTRMARHSIKGNFHSFLTKEDALIARPLMGILEQCGQAVPEALRNLHLTSS 487


>ref|XP_006492170.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 5-like [Citrus
           sinensis]
          Length = 573

 Score = 67.4 bits (163), Expect = 6e-09
 Identities = 38/104 (36%), Positives = 57/104 (54%)
 Frame = -1

Query: 609 VASCINLSSEKGVAVSVMDKDHMSMCQNXXXXXXXXXVDFPSIDDYTGILTKMARHSVDG 430
           + + +     K  AVS++DKDH+S  +              S+ +Y  ILT MARH+V G
Sbjct: 471 IKNSVEADGRKRPAVSMIDKDHISTAELEEYEVVIVPDFIISMKNYVEILTSMARHTVSG 530

Query: 429 AMHIFLHEADVLSAVPLIKLLEQCSQPVPETLKNCLNSSSAMLE 298
            +H F  + D   A  +I++LEQC Q VP+ L++ L  +S MLE
Sbjct: 531 ILHSFFTKDDAAHAGQMIEILEQCGQVVPDALRD-LYHTSPMLE 573


>ref|XP_006436687.1| hypothetical protein CICLE_v10033771mg, partial [Citrus clementina]
           gi|557538883|gb|ESR49927.1| hypothetical protein
           CICLE_v10033771mg, partial [Citrus clementina]
          Length = 157

 Score = 67.4 bits (163), Expect = 6e-09
 Identities = 38/104 (36%), Positives = 57/104 (54%)
 Frame = -1

Query: 609 VASCINLSSEKGVAVSVMDKDHMSMCQNXXXXXXXXXVDFPSIDDYTGILTKMARHSVDG 430
           + + +     K  AVS++DKDH+S  +              S+ +Y  ILT MARH+V G
Sbjct: 55  IKNSVEADGRKRPAVSMIDKDHISTAELEEYEVVIVPDFIISMKNYVEILTSMARHTVSG 114

Query: 429 AMHIFLHEADVLSAVPLIKLLEQCSQPVPETLKNCLNSSSAMLE 298
            +H F  + D   A  +I++LEQC Q VP+ L++ L  +S MLE
Sbjct: 115 ILHSFFTKDDAAHAGQMIEILEQCGQVVPDALRD-LYHTSPMLE 157


>gb|KDO40535.1| hypothetical protein CISIN_1g0082352mg, partial [Citrus sinensis]
          Length = 157

 Score = 67.0 bits (162), Expect = 8e-09
 Identities = 38/104 (36%), Positives = 57/104 (54%)
 Frame = -1

Query: 609 VASCINLSSEKGVAVSVMDKDHMSMCQNXXXXXXXXXVDFPSIDDYTGILTKMARHSVDG 430
           + + +     K  AVS++DKDH+S  +              S+ +Y  ILT MARH+V G
Sbjct: 55  IKNSVEADGRKRPAVSMIDKDHISTAELEEYEVVIVPDFIISMKNYVEILTSMARHTVSG 114

Query: 429 AMHIFLHEADVLSAVPLIKLLEQCSQPVPETLKNCLNSSSAMLE 298
            +H F  + D   A  +I++LEQC Q VP+ L++ L  +S MLE
Sbjct: 115 ILHSFFTKDDAAHAGQMIEILEQCGQVVPDALRD-LCHTSPMLE 157


>gb|KJB73411.1| hypothetical protein B456_011G232400 [Gossypium raimondii]
          Length = 85

 Score = 65.5 bits (158), Expect = 2e-08
 Identities = 37/81 (45%), Positives = 51/81 (62%), Gaps = 1/81 (1%)
 Frame = -1

Query: 567 VSVMDKDHMSMCQNXXXXXXXXXVDFP-SIDDYTGILTKMARHSVDGAMHIFLHEADVLS 391
           VS++  +++S C +          DF  SIDDY  ILT+MARH+V+G +H FL + D   
Sbjct: 5   VSIIGSENIS-CTDLGEYGVVIIPDFVLSIDDYLQILTRMARHTVNGVLHSFLTKDDSQH 63

Query: 390 AVPLIKLLEQCSQPVPETLKN 328
           A PLI++LEQC Q V E L+N
Sbjct: 64  AGPLIEILEQCGQEVAEELRN 84


>ref|XP_009335126.1| PREDICTED: ATP-dependent RNA helicase DBP3-like [Pyrus x
           bretschneideri]
          Length = 581

 Score = 65.5 bits (158), Expect = 2e-08
 Identities = 36/98 (36%), Positives = 50/98 (51%)
 Frame = -1

Query: 609 VASCINLSSEKGVAVSVMDKDHMSMCQNXXXXXXXXXVDFPSIDDYTGILTKMARHSVDG 430
           V + + +      AVS++D D +                  SID Y  ILT+MAR+SV+G
Sbjct: 484 VGNSVEMKGRTRPAVSMIDIDQIGATDFSEYECVVLPDLILSIDSYVQILTRMARYSVNG 543

Query: 429 AMHIFLHEADVLSAVPLIKLLEQCSQPVPETLKNCLNS 316
            +H F    D   A PLIK+LEQC Q VP+ L+   +S
Sbjct: 544 VLHSFFTREDAKLAAPLIKILEQCGQAVPDALRKMSSS 581


>ref|XP_009335122.1| PREDICTED: ATP-dependent RNA helicase DBP3-like [Pyrus x
           bretschneideri]
          Length = 564

 Score = 65.5 bits (158), Expect = 2e-08
 Identities = 36/98 (36%), Positives = 50/98 (51%)
 Frame = -1

Query: 609 VASCINLSSEKGVAVSVMDKDHMSMCQNXXXXXXXXXVDFPSIDDYTGILTKMARHSVDG 430
           V + + +      AVS++D D +                  SID Y  ILT+MAR+SV+G
Sbjct: 467 VGNSVEMKGRTRPAVSMIDIDQIGATDFSEYECVVLPDLILSIDSYVQILTRMARYSVNG 526

Query: 429 AMHIFLHEADVLSAVPLIKLLEQCSQPVPETLKNCLNS 316
            +H F    D   A PLIK+LEQC Q VP+ L+   +S
Sbjct: 527 VLHSFFTREDAKLAAPLIKILEQCGQAVPDALRKMSSS 564


>ref|XP_003590262.1| DEAD-box helicase family protein [Medicago truncatula]
           gi|355479310|gb|AES60513.1| DEAD-box helicase family
           protein [Medicago truncatula]
          Length = 532

 Score = 65.5 bits (158), Expect = 2e-08
 Identities = 33/60 (55%), Positives = 42/60 (70%)
 Frame = -1

Query: 489 PSIDDYTGILTKMARHSVDGAMHIFLHEADVLSAVPLIKLLEQCSQPVPETLKNCLNSSS 310
           PS+D Y  ILT MAR SV+G +H FL ++D   A PLI +LEQC Q VPETLK+   +S+
Sbjct: 466 PSMDTYEHILTNMARQSVNGILHGFLTKSDTEHAGPLISILEQCGQEVPETLKDLHQASN 525


>ref|XP_007010194.1| P-loop containing nucleoside triphosphate hydrolases superfamily
           protein, putative isoform 1 [Theobroma cacao]
           gi|508727107|gb|EOY19004.1| P-loop containing nucleoside
           triphosphate hydrolases superfamily protein, putative
           isoform 1 [Theobroma cacao]
          Length = 578

 Score = 65.1 bits (157), Expect = 3e-08
 Identities = 35/80 (43%), Positives = 47/80 (58%)
 Frame = -1

Query: 567 VSVMDKDHMSMCQNXXXXXXXXXVDFPSIDDYTGILTKMARHSVDGAMHIFLHEADVLSA 388
           VSV+  +H+S                 SIDDY  IL++MAR +V+G +H FL E D   A
Sbjct: 491 VSVVATEHISSTDLGEYGVVILPDFVLSIDDYVQILSRMARQTVNGVLHSFLTEDDAQHA 550

Query: 387 VPLIKLLEQCSQPVPETLKN 328
            PLI++LE+C Q VPE L+N
Sbjct: 551 GPLIEILEKCGQAVPEALRN 570


>ref|XP_004491931.1| PREDICTED: pre-mRNA-processing ATP-dependent RNA helicase prp5
           [Cicer arietinum]
          Length = 544

 Score = 64.7 bits (156), Expect = 4e-08
 Identities = 35/64 (54%), Positives = 44/64 (68%)
 Frame = -1

Query: 489 PSIDDYTGILTKMARHSVDGAMHIFLHEADVLSAVPLIKLLEQCSQPVPETLKNCLNSSS 310
           PS+D Y  ILT MAR SV+G ++ FL + D   A PLI +LEQC Q VP+TL+N L+  S
Sbjct: 481 PSMDTYVHILTNMARQSVNGVLYGFLTKRDTELAGPLISILEQCGQEVPDTLQN-LHQES 539

Query: 309 AMLE 298
            MLE
Sbjct: 540 NMLE 543


Top