BLASTX nr result
ID: Cinnamomum24_contig00020659
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Cinnamomum24_contig00020659
(366 letters)
Database: ./nr
77,306,371 sequences; 28,104,191,420 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_010668088.1| PREDICTED: pentatricopeptide repeat-containi... 69 1e-09
ref|XP_004138818.1| PREDICTED: pentatricopeptide repeat-containi... 68 2e-09
ref|XP_010537812.1| PREDICTED: pentatricopeptide repeat-containi... 68 3e-09
ref|XP_008441211.1| PREDICTED: pentatricopeptide repeat-containi... 67 5e-09
ref|XP_010265649.1| PREDICTED: pentatricopeptide repeat-containi... 67 7e-09
ref|XP_002316152.1| pentatricopeptide repeat-containing family p... 65 2e-08
ref|XP_011014127.1| PREDICTED: pentatricopeptide repeat-containi... 65 3e-08
ref|XP_012078463.1| PREDICTED: pentatricopeptide repeat-containi... 64 3e-08
ref|XP_002887788.1| EMB2217 [Arabidopsis lyrata subsp. lyrata] g... 64 3e-08
ref|XP_002532083.1| pentatricopeptide repeat-containing protein,... 64 6e-08
ref|XP_006300415.1| hypothetical protein CARUB_v10021690mg [Caps... 64 6e-08
ref|NP_178067.1| pentatricopeptide repeat-containing protein [Ar... 63 8e-08
ref|XP_006389884.1| hypothetical protein EUTSA_v10018121mg [Eutr... 63 8e-08
ref|XP_010417611.1| PREDICTED: pentatricopeptide repeat-containi... 62 2e-07
ref|XP_010025649.1| PREDICTED: pentatricopeptide repeat-containi... 62 2e-07
ref|XP_012456038.1| PREDICTED: pentatricopeptide repeat-containi... 61 4e-07
ref|XP_004245808.1| PREDICTED: pentatricopeptide repeat-containi... 61 4e-07
ref|XP_006359236.1| PREDICTED: pentatricopeptide repeat-containi... 60 5e-07
ref|XP_004306550.1| PREDICTED: pentatricopeptide repeat-containi... 58 6e-07
gb|KCW62354.1| hypothetical protein EUGRSUZ_H04993 [Eucalyptus g... 60 8e-07
>ref|XP_010668088.1| PREDICTED: pentatricopeptide repeat-containing protein At1g79490,
mitochondrial [Beta vulgaris subsp. vulgaris]
gi|870840772|gb|KMS94906.1| hypothetical protein
BVRB_014230 [Beta vulgaris subsp. vulgaris]
Length = 818
Score = 69.3 bits (168), Expect = 1e-09
Identities = 38/70 (54%), Positives = 45/70 (64%)
Frame = -3
Query: 211 FSPIPVTPNSFWLFFSSARINNHPLCRHFASEKTPTDGSSEWTDDIVYLDESGDVIFSGK 32
F PIPV +S +F S + N R F SEK +SEWTD+I YLDE G V++SGK
Sbjct: 44 FRPIPVHLSSNSIFHS---VKNPKFARSFCSEKP---NASEWTDEIEYLDEKGSVLYSGK 97
Query: 31 GIRSVEPGLD 2
GIRSVEPG D
Sbjct: 98 GIRSVEPGFD 107
>ref|XP_004138818.1| PREDICTED: pentatricopeptide repeat-containing protein At1g79490,
mitochondrial [Cucumis sativus]
gi|700207976|gb|KGN63095.1| hypothetical protein
Csa_2G402030 [Cucumis sativus]
Length = 823
Score = 68.2 bits (165), Expect = 2e-09
Identities = 31/50 (62%), Positives = 36/50 (72%)
Frame = -3
Query: 151 NNHPLCRHFASEKTPTDGSSEWTDDIVYLDESGDVIFSGKGIRSVEPGLD 2
NN R + S K +G EWT+DI YLDESG VIFSGKG+RSVEPG+D
Sbjct: 63 NNRSFTRSYCSGKESGNGGREWTEDIEYLDESGSVIFSGKGVRSVEPGVD 112
>ref|XP_010537812.1| PREDICTED: pentatricopeptide repeat-containing protein At1g79490,
mitochondrial [Tarenaya hassleriana]
Length = 833
Score = 67.8 bits (164), Expect = 3e-09
Identities = 40/100 (40%), Positives = 55/100 (55%)
Frame = -3
Query: 301 SSFPFHPQIHRNTKTFHSHQTQQAHLTKFTFSPIPVTPNSFWLFFSSARINNHPLCRHFA 122
SS P +P N + HS ++ + + S +P P+ F + N + R +
Sbjct: 30 SSSPIYPSSRANESSCHSSNSRFS-TRLYPISSVPENPS----FVGCQQTRN--IVRSYC 82
Query: 121 SEKTPTDGSSEWTDDIVYLDESGDVIFSGKGIRSVEPGLD 2
S K+ S WT++I YLDESG VI+SGKGIRSVEPGLD
Sbjct: 83 SGKSNNGESGGWTEEIEYLDESGSVIYSGKGIRSVEPGLD 122
>ref|XP_008441211.1| PREDICTED: pentatricopeptide repeat-containing protein At1g79490,
mitochondrial [Cucumis melo]
Length = 823
Score = 67.0 bits (162), Expect = 5e-09
Identities = 31/50 (62%), Positives = 36/50 (72%)
Frame = -3
Query: 151 NNHPLCRHFASEKTPTDGSSEWTDDIVYLDESGDVIFSGKGIRSVEPGLD 2
NN R + S K +G EWT+DI YLDESG VIFSGKG+RSVEPG+D
Sbjct: 63 NNRSFTRPYCSGKEIGNGGREWTEDIEYLDESGSVIFSGKGVRSVEPGVD 112
>ref|XP_010265649.1| PREDICTED: pentatricopeptide repeat-containing protein At1g79490,
mitochondrial [Nelumbo nucifera]
Length = 845
Score = 66.6 bits (161), Expect = 7e-09
Identities = 35/61 (57%), Positives = 41/61 (67%)
Frame = -3
Query: 184 SFWLFFSSARINNHPLCRHFASEKTPTDGSSEWTDDIVYLDESGDVIFSGKGIRSVEPGL 5
+F L F CR F+S ++ D S+EWT+DI YLDE G VIFSGKGIRSVEPGL
Sbjct: 75 NFDLIFPKFPTGYSSFCRTFSSGESCND-STEWTEDIEYLDEKGSVIFSGKGIRSVEPGL 133
Query: 4 D 2
D
Sbjct: 134 D 134
>ref|XP_002316152.1| pentatricopeptide repeat-containing family protein [Populus
trichocarpa] gi|222865192|gb|EEF02323.1|
pentatricopeptide repeat-containing family protein
[Populus trichocarpa]
Length = 785
Score = 65.1 bits (157), Expect = 2e-08
Identities = 30/58 (51%), Positives = 39/58 (67%)
Frame = -3
Query: 175 LFFSSARINNHPLCRHFASEKTPTDGSSEWTDDIVYLDESGDVIFSGKGIRSVEPGLD 2
L + + + R++ + K GS EWT+DI YLDESG VI+SGKGIRSVEPG+D
Sbjct: 18 LVSNGGHVKANSFVRNYCAGKNGEAGSGEWTEDIEYLDESGSVIYSGKGIRSVEPGVD 75
>ref|XP_011014127.1| PREDICTED: pentatricopeptide repeat-containing protein At1g79490,
mitochondrial [Populus euphratica]
Length = 840
Score = 64.7 bits (156), Expect = 3e-08
Identities = 30/58 (51%), Positives = 39/58 (67%)
Frame = -3
Query: 175 LFFSSARINNHPLCRHFASEKTPTDGSSEWTDDIVYLDESGDVIFSGKGIRSVEPGLD 2
L + + + R++ + K GS EWT+DI YLDESG VI+SGKGIRSVEPG+D
Sbjct: 73 LVSNGGHVKANRFVRNYCAGKNGEAGSGEWTEDIEYLDESGSVIYSGKGIRSVEPGVD 130
>ref|XP_012078463.1| PREDICTED: pentatricopeptide repeat-containing protein At1g79490,
mitochondrial [Jatropha curcas]
Length = 841
Score = 64.3 bits (155), Expect = 3e-08
Identities = 31/45 (68%), Positives = 37/45 (82%), Gaps = 1/45 (2%)
Frame = -3
Query: 133 RHFASEKTPT-DGSSEWTDDIVYLDESGDVIFSGKGIRSVEPGLD 2
R++ S K T GSS+WT+DI YLDESG VI+SGKGIRSVEPG+D
Sbjct: 86 RNYCSAKNNTGSGSSQWTEDIQYLDESGGVIYSGKGIRSVEPGVD 130
>ref|XP_002887788.1| EMB2217 [Arabidopsis lyrata subsp. lyrata]
gi|297333629|gb|EFH64047.1| EMB2217 [Arabidopsis lyrata
subsp. lyrata]
Length = 832
Score = 64.3 bits (155), Expect = 3e-08
Identities = 33/67 (49%), Positives = 41/67 (61%)
Frame = -3
Query: 202 IPVTPNSFWLFFSSARINNHPLCRHFASEKTPTDGSSEWTDDIVYLDESGDVIFSGKGIR 23
+P PN F + + R F SEK+ SS WT+++ YLDESG V+ SGKGIR
Sbjct: 60 VPRDPN-----FVGLTTQSRSIVRRFCSEKSGGSESSGWTEEVEYLDESGSVLHSGKGIR 114
Query: 22 SVEPGLD 2
SVEPGLD
Sbjct: 115 SVEPGLD 121
>ref|XP_002532083.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis] gi|223528243|gb|EEF30297.1| pentatricopeptide
repeat-containing protein, putative [Ricinus communis]
Length = 841
Score = 63.5 bits (153), Expect = 6e-08
Identities = 29/44 (65%), Positives = 35/44 (79%)
Frame = -3
Query: 133 RHFASEKTPTDGSSEWTDDIVYLDESGDVIFSGKGIRSVEPGLD 2
R++ S GS++WT+DI YLDESG VI+SGKGIRSVEPGLD
Sbjct: 92 RNYCSGNINEGGSAKWTEDIEYLDESGSVIYSGKGIRSVEPGLD 135
>ref|XP_006300415.1| hypothetical protein CARUB_v10021690mg [Capsella rubella]
gi|482569125|gb|EOA33313.1| hypothetical protein
CARUB_v10021690mg [Capsella rubella]
Length = 836
Score = 63.5 bits (153), Expect = 6e-08
Identities = 39/96 (40%), Positives = 49/96 (51%), Gaps = 27/96 (28%)
Frame = -3
Query: 208 SPIPVTPNSFWLFFSSARINNH--------PLC-------------------RHFASEKT 110
SP PV PN +F + R+ ++ P C R F SEK
Sbjct: 30 SPSPVNPNLAGSYFFNVRLLSYFAARNGICPDCSVPRDSDFVGLAKQSRSIVRRFCSEKG 89
Query: 109 PTDGSSEWTDDIVYLDESGDVIFSGKGIRSVEPGLD 2
+ SS WT+++ YLDESG V+ SGKGIRSVEPGLD
Sbjct: 90 GSSESSGWTEEVEYLDESGSVLHSGKGIRSVEPGLD 125
>ref|NP_178067.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75200795|sp|Q9SAK0.1|PP132_ARATH RecName:
Full=Pentatricopeptide repeat-containing protein
At1g79490, mitochondrial; AltName: Full=Protein EMBRYO
DEFECTIVE 2217; Flags: Precursor
gi|4835759|gb|AAD30226.1|AC007202_8 T8K14.9 [Arabidopsis
thaliana] gi|332198129|gb|AEE36250.1| pentatricopeptide
repeat-containing protein [Arabidopsis thaliana]
Length = 836
Score = 63.2 bits (152), Expect = 8e-08
Identities = 29/46 (63%), Positives = 35/46 (76%)
Frame = -3
Query: 139 LCRHFASEKTPTDGSSEWTDDIVYLDESGDVIFSGKGIRSVEPGLD 2
+ R F SEK + SS WT+++ YLDESG V+ SGKGIRSVEPGLD
Sbjct: 80 IVRRFCSEKIGSSESSGWTEEVEYLDESGSVLHSGKGIRSVEPGLD 125
>ref|XP_006389884.1| hypothetical protein EUTSA_v10018121mg [Eutrema salsugineum]
gi|557086318|gb|ESQ27170.1| hypothetical protein
EUTSA_v10018121mg [Eutrema salsugineum]
Length = 836
Score = 63.2 bits (152), Expect = 8e-08
Identities = 29/44 (65%), Positives = 35/44 (79%)
Frame = -3
Query: 133 RHFASEKTPTDGSSEWTDDIVYLDESGDVIFSGKGIRSVEPGLD 2
R F S+K+ + SS WT+++ YLDESG VI SGKGIRSVEPGLD
Sbjct: 82 RRFCSDKSRSSESSGWTEEVEYLDESGSVIHSGKGIRSVEPGLD 125
>ref|XP_010417611.1| PREDICTED: pentatricopeptide repeat-containing protein At1g79490,
mitochondrial [Camelina sativa]
Length = 834
Score = 62.0 bits (149), Expect = 2e-07
Identities = 34/73 (46%), Positives = 44/73 (60%), Gaps = 3/73 (4%)
Frame = -3
Query: 211 FSP---IPVTPNSFWLFFSSARINNHPLCRHFASEKTPTDGSSEWTDDIVYLDESGDVIF 41
FSP +P P+ F+ + + R F EK + SS WT+++ YLDESG V+
Sbjct: 56 FSPDCSVPRDPD-----FAGLAKPSRSIVRRFCGEKGASSESSGWTEEVEYLDESGSVLH 110
Query: 40 SGKGIRSVEPGLD 2
SGKGIRSVEPGLD
Sbjct: 111 SGKGIRSVEPGLD 123
>ref|XP_010025649.1| PREDICTED: pentatricopeptide repeat-containing protein At1g79490,
mitochondrial [Eucalyptus grandis]
Length = 835
Score = 62.0 bits (149), Expect = 2e-07
Identities = 34/71 (47%), Positives = 42/71 (59%), Gaps = 11/71 (15%)
Frame = -3
Query: 181 FWLFFSSARIN-----NHPLCRHFASEKTPTDG------SSEWTDDIVYLDESGDVIFSG 35
FW F + +P C+ F S + G SSEWT++I YLDESG VI+SG
Sbjct: 56 FWSPFEGRGVEIPIFAKYPGCQSFRSYCSGMSGGGDGAKSSEWTEEIEYLDESGSVIYSG 115
Query: 34 KGIRSVEPGLD 2
KG+RSVEPGLD
Sbjct: 116 KGVRSVEPGLD 126
>ref|XP_012456038.1| PREDICTED: pentatricopeptide repeat-containing protein At1g79490,
mitochondrial [Gossypium raimondii]
gi|763806079|gb|KJB73017.1| hypothetical protein
B456_011G209700 [Gossypium raimondii]
Length = 824
Score = 60.8 bits (146), Expect = 4e-07
Identities = 38/70 (54%), Positives = 43/70 (61%), Gaps = 8/70 (11%)
Frame = -3
Query: 187 NSFWLFFSSARINN----HPLCRHFASEKTP----TDGSSEWTDDIVYLDESGDVIFSGK 32
NSF F SS IN H L ++ P + S EWT+DI YLDESG VI+SGK
Sbjct: 44 NSFSFFNSSMGINQISPFHTLYKNPNFIGNPRIVRSYCSGEWTEDIEYLDESGSVIYSGK 103
Query: 31 GIRSVEPGLD 2
GIRSVEPGLD
Sbjct: 104 GIRSVEPGLD 113
>ref|XP_004245808.1| PREDICTED: pentatricopeptide repeat-containing protein At1g79490,
mitochondrial [Solanum lycopersicum]
Length = 794
Score = 60.8 bits (146), Expect = 4e-07
Identities = 29/44 (65%), Positives = 35/44 (79%)
Frame = -3
Query: 133 RHFASEKTPTDGSSEWTDDIVYLDESGDVIFSGKGIRSVEPGLD 2
R++ S K+ S EWT+D+ YLDESG VI+SGKGIRSVEPGLD
Sbjct: 43 RYYCSGKS----SDEWTEDVEYLDESGSVIYSGKGIRSVEPGLD 82
>ref|XP_006359236.1| PREDICTED: pentatricopeptide repeat-containing protein At1g79490,
mitochondrial-like [Solanum tuberosum]
Length = 794
Score = 60.5 bits (145), Expect = 5e-07
Identities = 29/44 (65%), Positives = 34/44 (77%)
Frame = -3
Query: 133 RHFASEKTPTDGSSEWTDDIVYLDESGDVIFSGKGIRSVEPGLD 2
R++ S K S EWT+D+ YLDESG VI+SGKGIRSVEPGLD
Sbjct: 43 RYYCSGKN----SDEWTEDVEYLDESGSVIYSGKGIRSVEPGLD 82
>ref|XP_004306550.1| PREDICTED: pentatricopeptide repeat-containing protein At1g79490,
mitochondrial [Fragaria vesca subsp. vesca]
Length = 844
Score = 57.8 bits (138), Expect(2) = 6e-07
Identities = 28/44 (63%), Positives = 34/44 (77%)
Frame = -3
Query: 133 RHFASEKTPTDGSSEWTDDIVYLDESGDVIFSGKGIRSVEPGLD 2
R++ S K S EWT++I YLDESG VI++GKGIRSVEPGLD
Sbjct: 94 RNYCSGKN----SDEWTEEIEYLDESGSVIYTGKGIRSVEPGLD 133
Score = 22.3 bits (46), Expect(2) = 6e-07
Identities = 12/34 (35%), Positives = 15/34 (44%)
Frame = -1
Query: 267 TPKPSILIKPNKPISPNSHFLPFQSPPIHFGCSF 166
+PK S+ I PN S L F + GC F
Sbjct: 59 SPKYSVPINPNLVGSSGFSRLNFSENSLSVGCDF 92
>gb|KCW62354.1| hypothetical protein EUGRSUZ_H04993 [Eucalyptus grandis]
Length = 706
Score = 59.7 bits (143), Expect = 8e-07
Identities = 26/32 (81%), Positives = 30/32 (93%)
Frame = -3
Query: 97 SSEWTDDIVYLDESGDVIFSGKGIRSVEPGLD 2
SSEWT++I YLDESG VI+SGKG+RSVEPGLD
Sbjct: 10 SSEWTEEIEYLDESGSVIYSGKGVRSVEPGLD 41