BLASTX nr result

ID: Cinnamomum24_contig00020648 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cinnamomum24_contig00020648
         (245 letters)

Database: ./nr 
           77,306,371 sequences; 28,104,191,420 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI35735.3| unnamed protein product [Vitis vinifera]               52   1e-06

>emb|CBI35735.3| unnamed protein product [Vitis vinifera]
          Length = 234

 Score = 51.6 bits (122), Expect(2) = 1e-06
 Identities = 27/63 (42%), Positives = 36/63 (57%), Gaps = 6/63 (9%)
 Frame = +1

Query: 25  SFFFLSVPPQKRLPKEMDQKKGGTSETGYATH------YL*GKSHPSHRKHLQCHDHIGL 186
           SF  +  PP++R  +E+   +GG+ E+           +   KSHPSHRKHLQCHDHIG 
Sbjct: 51  SFPIVLFPPRERRTEEVCPARGGSVESFCCLSRELYDLFPYWKSHPSHRKHLQCHDHIGF 110

Query: 187 PFF 195
             F
Sbjct: 111 ALF 113



 Score = 27.7 bits (60), Expect(2) = 1e-06
 Identities = 13/15 (86%), Positives = 13/15 (86%)
 Frame = +3

Query: 183 FTLFSLVVQRTVAHP 227
           F LFSLVVQRTVA P
Sbjct: 110 FALFSLVVQRTVAPP 124


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