BLASTX nr result
ID: Cinnamomum24_contig00020005
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Cinnamomum24_contig00020005
(385 letters)
Database: ./nr
77,306,371 sequences; 28,104,191,420 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_010662778.1| PREDICTED: LOW QUALITY PROTEIN: pentatricope... 95 2e-17
ref|XP_010276946.1| PREDICTED: pentatricopeptide repeat-containi... 94 4e-17
ref|XP_008230331.1| PREDICTED: pentatricopeptide repeat-containi... 94 5e-17
ref|XP_010662840.1| PREDICTED: pentatricopeptide repeat-containi... 93 7e-17
ref|XP_010646617.1| PREDICTED: pentatricopeptide repeat-containi... 93 9e-17
ref|XP_009404489.1| PREDICTED: pentatricopeptide repeat-containi... 92 2e-16
emb|CBI23556.3| unnamed protein product [Vitis vinifera] 92 2e-16
ref|XP_010915655.1| PREDICTED: pentatricopeptide repeat-containi... 91 3e-16
ref|XP_008783966.1| PREDICTED: pentatricopeptide repeat-containi... 91 3e-16
emb|CDP05081.1| unnamed protein product [Coffea canephora] 90 8e-16
ref|XP_009760814.1| PREDICTED: pentatricopeptide repeat-containi... 89 1e-15
ref|XP_009760813.1| PREDICTED: pentatricopeptide repeat-containi... 89 1e-15
ref|XP_009587534.1| PREDICTED: pentatricopeptide repeat-containi... 86 1e-14
ref|XP_009373739.1| PREDICTED: pentatricopeptide repeat-containi... 86 1e-14
ref|XP_004231236.1| PREDICTED: pentatricopeptide repeat-containi... 85 2e-14
ref|XP_006347856.1| PREDICTED: pentatricopeptide repeat-containi... 85 2e-14
ref|XP_008341824.1| PREDICTED: pentatricopeptide repeat-containi... 83 9e-14
ref|XP_011076005.1| PREDICTED: pentatricopeptide repeat-containi... 81 4e-13
ref|XP_012851957.1| PREDICTED: pentatricopeptide repeat-containi... 80 5e-13
ref|XP_012440013.1| PREDICTED: pentatricopeptide repeat-containi... 80 6e-13
>ref|XP_010662778.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At3g49170, chloroplastic [Vitis vinifera]
Length = 982
Score = 95.1 bits (235), Expect = 2e-17
Identities = 59/107 (55%), Positives = 69/107 (64%), Gaps = 4/107 (3%)
Frame = -2
Query: 309 TMNTLSLIPTTTQNVPTKRPKHSKLSLPKPQFQNPT----KHPNFEPLKHRLIRLAESGH 142
TM TLSL P+ Q + P SK P Q P+ K+PNFEPLK+RLIR + G
Sbjct: 442 TMITLSL-PSPAQPL---LPPSSKTLNPSRQNIIPSSLSLKNPNFEPLKNRLIRQLDVGR 497
Query: 141 LKTALSTLDLMTQQGIQPDLTTYSVLLKSCIRSRNFDHGKRLHAQLL 1
L A STLDLMTQQ PDLTTYS+LLKSCIR RNF GK +H +L+
Sbjct: 498 LHHAFSTLDLMTQQNAPPDLTTYSILLKSCIRFRNFQLGKLVHRKLM 544
Score = 88.6 bits (218), Expect = 2e-15
Identities = 54/113 (47%), Positives = 65/113 (57%), Gaps = 3/113 (2%)
Frame = -2
Query: 330 SLFLSLSTMNTLSLIPTTTQNVPTKRPKHSKLSLPKPQF-QNPTKH--PNFEPLKHRLIR 160
SL L++ SL + P P LS P+ NP H PNFE LK+R IR
Sbjct: 53 SLKLAIGEDRDNSLSSLSRPTPPLLPPSFKTLSPPRQNIIPNPHSHKNPNFESLKNRQIR 112
Query: 159 LAESGHLKTALSTLDLMTQQGIQPDLTTYSVLLKSCIRSRNFDHGKRLHAQLL 1
+ GHL ALS+LDLMT Q PDLTTYS+LLKSCIR RNF K +H +L+
Sbjct: 113 QLDVGHLNHALSSLDLMTLQNAPPDLTTYSILLKSCIRFRNFQLRKLVHRKLI 165
>ref|XP_010276946.1| PREDICTED: pentatricopeptide repeat-containing protein At3g49170,
chloroplastic [Nelumbo nucifera]
Length = 856
Score = 94.0 bits (232), Expect = 4e-17
Identities = 53/104 (50%), Positives = 66/104 (63%), Gaps = 2/104 (1%)
Frame = -2
Query: 306 MNTLSLIPTTTQNVP--TKRPKHSKLSLPKPQFQNPTKHPNFEPLKHRLIRLAESGHLKT 133
+NT +P + P + RP K+S + KHP FEPLK+RLIRL G+L
Sbjct: 2 INTCLGVPAKIISPPLTSLRPSRDKISSGES-----LKHPQFEPLKNRLIRLVNGGNLDG 56
Query: 132 ALSTLDLMTQQGIQPDLTTYSVLLKSCIRSRNFDHGKRLHAQLL 1
ALSTL+ MTQ+GIQ DL TYSVLLKSCIR R FD GK +H + +
Sbjct: 57 ALSTLEFMTQKGIQADLVTYSVLLKSCIRFRAFDRGKVVHRRFI 100
>ref|XP_008230331.1| PREDICTED: pentatricopeptide repeat-containing protein At3g49170,
chloroplastic [Prunus mume]
Length = 846
Score = 93.6 bits (231), Expect = 5e-17
Identities = 45/82 (54%), Positives = 57/82 (69%)
Frame = -2
Query: 246 HSKLSLPKPQFQNPTKHPNFEPLKHRLIRLAESGHLKTALSTLDLMTQQGIQPDLTTYSV 67
H+ LP P P K PNF+ L +RLI GHL+ A++TLDLM Q+G PDL YS+
Sbjct: 9 HAPAKLPLPPSLRPQKSPNFDSLNNRLISHINVGHLRKAITTLDLMAQRGTHPDLPIYSL 68
Query: 66 LLKSCIRSRNFDHGKRLHAQLL 1
LLKSCIRSRNFD G+ +HA+L+
Sbjct: 69 LLKSCIRSRNFDLGRLVHARLV 90
>ref|XP_010662840.1| PREDICTED: pentatricopeptide repeat-containing protein At3g49170,
chloroplastic-like [Vitis vinifera]
Length = 620
Score = 93.2 bits (230), Expect = 7e-17
Identities = 58/106 (54%), Positives = 68/106 (64%), Gaps = 4/106 (3%)
Frame = -2
Query: 306 MNTLSLIPTTTQNVPTKRPKHSKLSLPKPQFQNPT----KHPNFEPLKHRLIRLAESGHL 139
M TLSL P+ Q + P SK P Q P+ K+PNFEPLK+RLIR + G L
Sbjct: 1 MITLSL-PSPAQPL---LPPSSKTLNPSRQNIIPSSLSLKNPNFEPLKNRLIRQLDVGRL 56
Query: 138 KTALSTLDLMTQQGIQPDLTTYSVLLKSCIRSRNFDHGKRLHAQLL 1
A STLDLMTQQ PDLTTYS+LLKSCIR RNF GK +H +L+
Sbjct: 57 HHAFSTLDLMTQQNAPPDLTTYSILLKSCIRFRNFQLGKLVHRKLM 102
>ref|XP_010646617.1| PREDICTED: pentatricopeptide repeat-containing protein At3g49170,
chloroplastic-like [Vitis vinifera]
Length = 406
Score = 92.8 bits (229), Expect = 9e-17
Identities = 56/106 (52%), Positives = 66/106 (62%), Gaps = 4/106 (3%)
Frame = -2
Query: 306 MNTLSLIPTTTQNVPTKRPKHSKLSLPKPQFQNPT----KHPNFEPLKHRLIRLAESGHL 139
M TLSL+ +P SK P Q P+ K+PNFEPLK+RLIR + G L
Sbjct: 1 MITLSLLSPAQPLLPPS----SKTLNPSRQNIIPSSLSLKNPNFEPLKNRLIRQLDVGRL 56
Query: 138 KTALSTLDLMTQQGIQPDLTTYSVLLKSCIRSRNFDHGKRLHAQLL 1
A STLDLMTQQ PDLTTYS+LLKSCIR RNF GK +H +L+
Sbjct: 57 HHAFSTLDLMTQQNAPPDLTTYSILLKSCIRFRNFQLGKLVHRKLM 102
>ref|XP_009404489.1| PREDICTED: pentatricopeptide repeat-containing protein At3g49170,
chloroplastic [Musa acuminata subsp. malaccensis]
Length = 862
Score = 91.7 bits (226), Expect = 2e-16
Identities = 43/77 (55%), Positives = 59/77 (76%)
Frame = -2
Query: 234 SLPKPQFQNPTKHPNFEPLKHRLIRLAESGHLKTALSTLDLMTQQGIQPDLTTYSVLLKS 55
S+ P + PTKHP+ EPLKHRLIRLA++G + A+STLDLM+ +G+ DL +YSVLL+S
Sbjct: 30 SVTSPPPRIPTKHPSLEPLKHRLIRLADAGRVDDAISTLDLMSDRGVPADLVSYSVLLRS 89
Query: 54 CIRSRNFDHGKRLHAQL 4
CIRSR+ G+ +H +L
Sbjct: 90 CIRSRDLVRGRIVHRRL 106
>emb|CBI23556.3| unnamed protein product [Vitis vinifera]
Length = 827
Score = 91.7 bits (226), Expect = 2e-16
Identities = 45/67 (67%), Positives = 52/67 (77%)
Frame = -2
Query: 201 KHPNFEPLKHRLIRLAESGHLKTALSTLDLMTQQGIQPDLTTYSVLLKSCIRSRNFDHGK 22
K+PNFEPLK+RLIR + G L A STLDLMTQQ PDLTTYS+LLKSCIR RNF GK
Sbjct: 5 KNPNFEPLKNRLIRQLDVGRLHHAFSTLDLMTQQNAPPDLTTYSILLKSCIRFRNFQLGK 64
Query: 21 RLHAQLL 1
+H +L+
Sbjct: 65 LVHRKLM 71
>ref|XP_010915655.1| PREDICTED: pentatricopeptide repeat-containing protein At3g49170,
chloroplastic [Elaeis guineensis]
Length = 862
Score = 91.3 bits (225), Expect = 3e-16
Identities = 52/106 (49%), Positives = 66/106 (62%), Gaps = 5/106 (4%)
Frame = -2
Query: 303 NTLSLIPTTTQNVPTK-----RPKHSKLSLPKPQFQNPTKHPNFEPLKHRLIRLAESGHL 139
+ LSL TT P + RPK + ++ PQ KHP EPLKHR+IRLA+ G L
Sbjct: 3 HALSLPAKTTSPHPLRPGSACRPK-TTITTTVPQTPATNKHPALEPLKHRVIRLADRGRL 61
Query: 138 KTALSTLDLMTQQGIQPDLTTYSVLLKSCIRSRNFDHGKRLHAQLL 1
ALS LDLM ++G+ DL TYSVL +SCIRSR+ G+ LH +LL
Sbjct: 62 DDALSALDLMDRRGVPADLVTYSVLFRSCIRSRDLARGRLLHRRLL 107
>ref|XP_008783966.1| PREDICTED: pentatricopeptide repeat-containing protein At3g49170,
chloroplastic [Phoenix dactylifera]
Length = 862
Score = 90.9 bits (224), Expect = 3e-16
Identities = 52/106 (49%), Positives = 66/106 (62%), Gaps = 4/106 (3%)
Frame = -2
Query: 306 MNTLSLIPTTTQNVPTK--RPKHSK--LSLPKPQFQNPTKHPNFEPLKHRLIRLAESGHL 139
++ LSL TT +P K P H K ++ PQ TKHP EPLK R I LA+ G L
Sbjct: 2 IHALSLPAKTTPPLPLKPFSPCHPKTPITTTVPQTPAATKHPALEPLKRRAIGLADRGRL 61
Query: 138 KTALSTLDLMTQQGIQPDLTTYSVLLKSCIRSRNFDHGKRLHAQLL 1
ALS LDLM ++G+ DL TYS+LL+SCIRSR+ G+ LH +LL
Sbjct: 62 DDALSALDLMARRGVPADLVTYSILLRSCIRSRDLARGRLLHRRLL 107
>emb|CDP05081.1| unnamed protein product [Coffea canephora]
Length = 862
Score = 89.7 bits (221), Expect = 8e-16
Identities = 51/110 (46%), Positives = 70/110 (63%), Gaps = 4/110 (3%)
Frame = -2
Query: 318 SLSTMNTLSLIPTTTQNVPTKRPKHSKLSLPKPQFQNPTKH----PNFEPLKHRLIRLAE 151
SLS+ + L P + P +RP+ + P Q +PT H P FE LK LIR A+
Sbjct: 3 SLSSPSPAKLFPLQS---PIRRPR----TPPSHQSLSPTHHRKTKPKFEALKDNLIRHAD 55
Query: 150 SGHLKTALSTLDLMTQQGIQPDLTTYSVLLKSCIRSRNFDHGKRLHAQLL 1
+G +K A+STLD M + G+ PDLT+YSVLLK CIR+RNF GK +H+++L
Sbjct: 56 AGDIKRAISTLDFMARNGLTPDLTSYSVLLKFCIRTRNFHLGKLIHSKIL 105
>ref|XP_009760814.1| PREDICTED: pentatricopeptide repeat-containing protein At3g49170,
chloroplastic isoform X2 [Nicotiana sylvestris]
gi|698527937|ref|XP_009760815.1| PREDICTED:
pentatricopeptide repeat-containing protein At3g49170,
chloroplastic isoform X3 [Nicotiana sylvestris]
Length = 849
Score = 89.4 bits (220), Expect = 1e-15
Identities = 47/87 (54%), Positives = 62/87 (71%), Gaps = 4/87 (4%)
Frame = -2
Query: 252 PKHSKLSLPKPQ----FQNPTKHPNFEPLKHRLIRLAESGHLKTALSTLDLMTQQGIQPD 85
P +KL P P+ Q ++PNFE LK RLIR A G+LK A+STLD ++Q G+ PD
Sbjct: 7 PSPAKLIPPSPKNLTSLQIHRRNPNFEALKDRLIRQANVGNLKQAISTLDHISQMGLTPD 66
Query: 84 LTTYSVLLKSCIRSRNFDHGKRLHAQL 4
LT+Y+VLLKSCIR+RNF G+ LH++L
Sbjct: 67 LTSYTVLLKSCIRTRNFQLGELLHSKL 93
>ref|XP_009760813.1| PREDICTED: pentatricopeptide repeat-containing protein At3g49170,
chloroplastic isoform X1 [Nicotiana sylvestris]
Length = 849
Score = 89.4 bits (220), Expect = 1e-15
Identities = 47/87 (54%), Positives = 62/87 (71%), Gaps = 4/87 (4%)
Frame = -2
Query: 252 PKHSKLSLPKPQ----FQNPTKHPNFEPLKHRLIRLAESGHLKTALSTLDLMTQQGIQPD 85
P +KL P P+ Q ++PNFE LK RLIR A G+LK A+STLD ++Q G+ PD
Sbjct: 7 PSPAKLIPPSPKNLTSLQIHRRNPNFEALKDRLIRQANVGNLKQAISTLDHISQMGLTPD 66
Query: 84 LTTYSVLLKSCIRSRNFDHGKRLHAQL 4
LT+Y+VLLKSCIR+RNF G+ LH++L
Sbjct: 67 LTSYTVLLKSCIRTRNFQLGELLHSKL 93
>ref|XP_009587534.1| PREDICTED: pentatricopeptide repeat-containing protein At3g49170,
chloroplastic [Nicotiana tomentosiformis]
Length = 851
Score = 85.9 bits (211), Expect = 1e-14
Identities = 46/87 (52%), Positives = 61/87 (70%), Gaps = 4/87 (4%)
Frame = -2
Query: 252 PKHSKLSLPKPQ----FQNPTKHPNFEPLKHRLIRLAESGHLKTALSTLDLMTQQGIQPD 85
P +KL P P+ Q ++PNFE LK RLIR A G+LK A+STLD ++Q G+ PD
Sbjct: 7 PSPAKLIPPSPKNLTSLQIHRRNPNFEALKDRLIRQANVGNLKQAISTLDHISQMGLTPD 66
Query: 84 LTTYSVLLKSCIRSRNFDHGKRLHAQL 4
LT+ +VLLKSCIR+RNF G+ LH++L
Sbjct: 67 LTSCTVLLKSCIRTRNFQLGELLHSKL 93
>ref|XP_009373739.1| PREDICTED: pentatricopeptide repeat-containing protein At3g49170,
chloroplastic-like [Pyrus x bretschneideri]
Length = 845
Score = 85.5 bits (210), Expect = 1e-14
Identities = 46/83 (55%), Positives = 56/83 (67%), Gaps = 5/83 (6%)
Frame = -2
Query: 237 LSLPKPQFQNPT-----KHPNFEPLKHRLIRLAESGHLKTALSTLDLMTQQGIQPDLTTY 73
LSLP P P K NFE L +RLI GHL+ A++TLDL+ Q+GI PDL TY
Sbjct: 6 LSLPAPAKLPPPPPLGPKATNFELLNNRLINQINVGHLRKAITTLDLLAQRGIHPDLPTY 65
Query: 72 SVLLKSCIRSRNFDHGKRLHAQL 4
S+L+KSCIRSRNFD GK +H +L
Sbjct: 66 SLLIKSCIRSRNFDLGKLVHDRL 88
>ref|XP_004231236.1| PREDICTED: pentatricopeptide repeat-containing protein At3g49170,
chloroplastic [Solanum lycopersicum]
Length = 844
Score = 85.1 bits (209), Expect = 2e-14
Identities = 46/85 (54%), Positives = 61/85 (71%), Gaps = 7/85 (8%)
Frame = -2
Query: 237 LSLPKP-QFQNPT------KHPNFEPLKHRLIRLAESGHLKTALSTLDLMTQQGIQPDLT 79
LSLP P +F P+ ++P+FE LK LIR A G+LK A+STLD ++Q G PDLT
Sbjct: 4 LSLPSPAKFIPPSSKSRRIRNPDFEALKDTLIRQANGGNLKQAISTLDQISQMGFNPDLT 63
Query: 78 TYSVLLKSCIRSRNFDHGKRLHAQL 4
+Y+VLLKSCIR+RNF G+ LH++L
Sbjct: 64 SYTVLLKSCIRTRNFQIGQLLHSKL 88
>ref|XP_006347856.1| PREDICTED: pentatricopeptide repeat-containing protein At3g49170,
chloroplastic-like [Solanum tuberosum]
Length = 849
Score = 84.7 bits (208), Expect = 2e-14
Identities = 44/87 (50%), Positives = 60/87 (68%), Gaps = 4/87 (4%)
Frame = -2
Query: 252 PKHSKLSLPKPQFQN----PTKHPNFEPLKHRLIRLAESGHLKTALSTLDLMTQQGIQPD 85
P +K P P+ +N ++P+FE LK LIR A G+LK A+STLD ++Q G PD
Sbjct: 7 PSPAKFIPPSPKSKNLKSRRIRNPDFEALKDTLIRQANVGNLKQAISTLDHISQMGFTPD 66
Query: 84 LTTYSVLLKSCIRSRNFDHGKRLHAQL 4
LT+Y+VLLKSCIR+RNF G+ LH++L
Sbjct: 67 LTSYTVLLKSCIRTRNFQFGQLLHSKL 93
>ref|XP_008341824.1| PREDICTED: pentatricopeptide repeat-containing protein At3g49170,
chloroplastic [Malus domestica]
Length = 845
Score = 82.8 bits (203), Expect = 9e-14
Identities = 45/83 (54%), Positives = 55/83 (66%), Gaps = 5/83 (6%)
Frame = -2
Query: 237 LSLPKPQFQNPT-----KHPNFEPLKHRLIRLAESGHLKTALSTLDLMTQQGIQPDLTTY 73
LSLP P P K NFE L +RLI GHL+ A++TLDL+ Q+GI PDL TY
Sbjct: 6 LSLPAPAKLPPPPPLSPKATNFELLNNRLINQINVGHLRKAITTLDLLAQRGIHPDLPTY 65
Query: 72 SVLLKSCIRSRNFDHGKRLHAQL 4
S+L+KSCIRSRNFD K +H +L
Sbjct: 66 SLLIKSCIRSRNFDLXKLVHDRL 88
>ref|XP_011076005.1| PREDICTED: pentatricopeptide repeat-containing protein At3g49170,
chloroplastic [Sesamum indicum]
gi|747059268|ref|XP_011076006.1| PREDICTED:
pentatricopeptide repeat-containing protein At3g49170,
chloroplastic [Sesamum indicum]
gi|747059270|ref|XP_011076007.1| PREDICTED:
pentatricopeptide repeat-containing protein At3g49170,
chloroplastic [Sesamum indicum]
Length = 851
Score = 80.9 bits (198), Expect = 4e-13
Identities = 46/101 (45%), Positives = 67/101 (66%)
Frame = -2
Query: 306 MNTLSLIPTTTQNVPTKRPKHSKLSLPKPQFQNPTKHPNFEPLKHRLIRLAESGHLKTAL 127
M +LSL T+ ++ R H+ SL P + F+ LK RLIR A++G ++ A+
Sbjct: 1 MISLSLPSPTSPSLKVNR--HNVTSL------RPPRSITFQTLKDRLIRQADAGRVQEAI 52
Query: 126 STLDLMTQQGIQPDLTTYSVLLKSCIRSRNFDHGKRLHAQL 4
S LDLM++ + PDLTTYSVLLKSCIR+RNF+ G+ +H++L
Sbjct: 53 SILDLMSRTNLTPDLTTYSVLLKSCIRTRNFELGQLVHSKL 93
>ref|XP_012851957.1| PREDICTED: pentatricopeptide repeat-containing protein At3g49170,
chloroplastic [Erythranthe guttatus]
Length = 856
Score = 80.5 bits (197), Expect = 5e-13
Identities = 44/99 (44%), Positives = 66/99 (66%)
Frame = -2
Query: 297 LSLIPTTTQNVPTKRPKHSKLSLPKPQFQNPTKHPNFEPLKHRLIRLAESGHLKTALSTL 118
+SL P +VP+ +P ++ S K ++ +FE L+ LIR A GH+ A+STL
Sbjct: 3 ISLSPPFPASVPSLKP--NRYSRHKISAVRTHQNISFESLQATLIRHANVGHVDEAVSTL 60
Query: 117 DLMTQQGIQPDLTTYSVLLKSCIRSRNFDHGKRLHAQLL 1
DLM++ + PDL TYSVLLKSCIR+RNF+ G+ +H++L+
Sbjct: 61 DLMSRANLAPDLATYSVLLKSCIRTRNFELGQLVHSRLI 99
>ref|XP_012440013.1| PREDICTED: pentatricopeptide repeat-containing protein At3g49170,
chloroplastic [Gossypium raimondii]
gi|763785523|gb|KJB52594.1| hypothetical protein
B456_008G269700 [Gossypium raimondii]
Length = 859
Score = 80.1 bits (196), Expect = 6e-13
Identities = 43/94 (45%), Positives = 56/94 (59%), Gaps = 7/94 (7%)
Frame = -2
Query: 264 PTKRPKHSKLSLPKPQFQNPTKHP-------NFEPLKHRLIRLAESGHLKTALSTLDLMT 106
P K P S P P+ + + P NFEPL+HRLI+ ++GHL A+STLD+M
Sbjct: 12 PAKSP-----SRPPPKLSSQSSVPLSVNRSVNFEPLRHRLIKHLDAGHLHKAISTLDVMA 66
Query: 105 QQGIQPDLTTYSVLLKSCIRSRNFDHGKRLHAQL 4
DL TYS+LLK+CIRSR+F GK +H L
Sbjct: 67 SHNAHQDLVTYSLLLKACIRSRDFQLGKLVHCHL 100