BLASTX nr result

ID: Cinnamomum24_contig00019476 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cinnamomum24_contig00019476
         (475 letters)

Database: ./nr 
           77,306,371 sequences; 28,104,191,420 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_010249664.1| PREDICTED: protein EMBRYONIC FLOWER 1-like [...    72   2e-10
ref|XP_010254057.1| PREDICTED: protein EMBRYONIC FLOWER 1-like [...    57   5e-06

>ref|XP_010249664.1| PREDICTED: protein EMBRYONIC FLOWER 1-like [Nelumbo nucifera]
          Length = 1159

 Score = 72.0 bits (175), Expect = 2e-10
 Identities = 50/148 (33%), Positives = 74/148 (50%), Gaps = 1/148 (0%)
 Frame = -3

Query: 455 LDVGFNIEFPASMSNGTSQFCHKDTIRLGRSHLVKMKKKHDKVMASYGTSLEVVKSAKSD 276
           ++VGF++      S  + + C+K    L   +L KM K++   +   GTS  V   +K +
Sbjct: 186 INVGFDVRNCKYTSKDSKEICNKGMPELCSINLTKMNKQYGDTIRDCGTSKVVDLDSKKN 245

Query: 275 VPLTVVVDPSSELNSIGLYQSDHNSSESSEDLAG-IGTRGQHIAGQLGTSTLQRKKPRKT 99
                 +  + +LN + L +SD+  SE+ E+L G  G RG           LQR K RK 
Sbjct: 246 EAPNSAIGQTEKLNPLELGESDYEYSENDENLPGNTGGRG---------GILQRCKTRKV 296

Query: 98  RFLTDIIRSEVPGVPNKILIFNKDAEIN 15
           R LTDIIRSEV    NKI    ++A I+
Sbjct: 297 RLLTDIIRSEVLATSNKICSSKRNARID 324


>ref|XP_010254057.1| PREDICTED: protein EMBRYONIC FLOWER 1-like [Nelumbo nucifera]
          Length = 1308

 Score = 57.0 bits (136), Expect = 5e-06
 Identities = 47/155 (30%), Positives = 69/155 (44%), Gaps = 2/155 (1%)
 Frame = -3

Query: 473 NTGGGSLDVGFNIEFPASMSNGTSQFCHKDTIRLGRSHLVKMKKKHDKVMASYGTSLEVV 294
           N   GS     N+     M N + +  +KD   +   ++ KM  +H  +M     S    
Sbjct: 292 NERHGSAVARENVRKLKCMRNDSKKMYNKDP-EVCTGNVGKMNGQHRHIMTECVISKVAD 350

Query: 293 KSAKSDVPLTVVVDPSSELNSIGLYQSDHNSSESSEDLAGIGTRGQHIAGQLGTS--TLQ 120
              + +           +LN + L +SD+  SE+ E+L G     ++ A QLG    TLQ
Sbjct: 351 AGIQKNESPNTATYQMGKLNPMDLDESDYEFSENDENLIGDNLGYEYHANQLGGIGVTLQ 410

Query: 119 RKKPRKTRFLTDIIRSEVPGVPNKILIFNKDAEIN 15
           + K RK R LTDIIRSEV    NK     +D  I+
Sbjct: 411 KIKTRKVRMLTDIIRSEVLAASNKNCSSERDGSID 445


Top