BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cinnamomum24_contig00019338
         (745 letters)

Database: ./nr 
           77,306,371 sequences; 28,104,191,420 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|EMS62068.1| DNA-directed RNA polymerase subunit alpha [Tritic...    52   1e-08

>gb|EMS62068.1| DNA-directed RNA polymerase subunit alpha [Triticum urartu]
          Length = 430

 Score = 52.4 bits (124), Expect(2) = 1e-08
 Identities = 30/52 (57%), Positives = 33/52 (63%), Gaps = 2/52 (3%)
 Frame = +1

Query: 145 MTLCKKRFTGFNFTGL--QLPIARNSVLTSKCSIPK*ASKFDHDQMLFGWSH 294
           MTL KK F  F+F  L  QL I  N +L  KCSI K A KFDHDQ+L G SH
Sbjct: 377 MTLGKKSFIRFSFPKLHLQLLIENNPILMGKCSISKWAYKFDHDQLLCGLSH 428



 Score = 35.0 bits (79), Expect(2) = 1e-08
 Identities = 13/16 (81%), Positives = 15/16 (93%)
 Frame = +3

Query: 36  IHPPKEPDMIIFYHPA 83
           IHPPKEPDM I++HPA
Sbjct: 339 IHPPKEPDMRIYHHPA 354