BLASTX nr result

ID: Cinnamomum24_contig00019196 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cinnamomum24_contig00019196
         (428 letters)

Database: ./nr 
           77,306,371 sequences; 28,104,191,420 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_010923947.1| PREDICTED: pentatricopeptide repeat-containi...    57   7e-06

>ref|XP_010923947.1| PREDICTED: pentatricopeptide repeat-containing protein At4g21170
           [Elaeis guineensis]
          Length = 571

 Score = 56.6 bits (135), Expect = 7e-06
 Identities = 36/90 (40%), Positives = 45/90 (50%), Gaps = 1/90 (1%)
 Frame = -3

Query: 342 MLPKTPSFLSSLAAQPTSLQWRXXXXXXXXXXXXXXXXXQRKNWIQXXXXXXXXXXXTAD 163
           ML +TP  L  L+  PTSL+WR                 QRK+W              A 
Sbjct: 1   MLVRTPH-LRRLSTLPTSLKWRNQFRQRALASQISSLLLQRKDWTPLLRSKPSLPTPLAS 59

Query: 162 HLF-QILQNTQNHPQISLDFFNWSKTNLPF 76
           +LF QIL  TQ+ P+ISL FFNW+K+NL F
Sbjct: 60  NLFLQILTGTQSQPEISLRFFNWAKSNLGF 89


Top