BLASTX nr result

ID: Cinnamomum24_contig00019010 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cinnamomum24_contig00019010
         (1491 letters)

Database: ./nr 
           77,306,371 sequences; 28,104,191,420 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ABD63154.1| hypothetical protein 20.t00006 [Asparagus officin...    71   2e-09
gb|ABD63171.1| hypothetical protein 20.t00023 [Asparagus officin...    70   6e-09
gb|ABD63142.1| Retrotransposon gag protein [Asparagus officinalis]     67   4e-08
gb|ABD63135.1| Retrotransposon gag protein [Asparagus officinalis]     67   4e-08
ref|XP_007015171.1| Uncharacterized protein TCM_040805 [Theobrom...    60   5e-06
ref|XP_006386953.1| hypothetical protein POPTR_2731s00200g, part...    59   9e-06

>gb|ABD63154.1| hypothetical protein 20.t00006 [Asparagus officinalis]
          Length = 851

 Score = 71.2 bits (173), Expect = 2e-09
 Identities = 37/117 (31%), Positives = 54/117 (46%), Gaps = 13/117 (11%)
 Frame = -3

Query: 1489 NDPRYCPYHQMVSHPLNQCFVVREKINEMWKNGVITFDKNYGSASVNMIS--YGQTPKKK 1316
            +DP YC YH+ + HP  +C+V ++ +  +    V+T      + S NMI+  +G  P   
Sbjct: 652  DDPNYCRYHRFLGHPTKKCYVFKDILQNLVNANVLTLKPEQKTVSTNMIAVQFGDFPPVV 711

Query: 1315 ITTSFKVINKIE-----------ASEGLVPYPTPDGQPLWVHPDLLEDENWEIVKTK 1178
                   I K E              GLVP  T  G+ +WVHPDLL D+ W    +K
Sbjct: 712  TANGVIPIRKGEMHLKNVDPHSQKDRGLVPLTTQKGEIMWVHPDLLRDQQWTSTSSK 768


>gb|ABD63171.1| hypothetical protein 20.t00023 [Asparagus officinalis]
          Length = 403

 Score = 69.7 bits (169), Expect = 6e-09
 Identities = 36/112 (32%), Positives = 60/112 (53%), Gaps = 14/112 (12%)
 Frame = -3

Query: 1489 NDPRYCPYHQMVSHPLNQCFVVREKINEMWKNGVITFDKNYGSASVNMI--SYG-QTPKK 1319
            +DP YC YH+ + H  ++C+++++K+  ++  GV+  +K     + NM+  S+G   P+ 
Sbjct: 92   DDPSYCTYHRFLGHHTSKCYILKDKLQTLYDVGVLKKEKVQKKVTTNMVILSFGTDLPEV 151

Query: 1318 KITTSF----KVINKI-------EASEGLVPYPTPDGQPLWVHPDLLEDENW 1196
               T      K + KI       +  +GLV    P GQ +WVHPDLL D+ W
Sbjct: 152  HAPTGVVPIPKAVLKITNADPHNQREKGLVSQTLPSGQVMWVHPDLLSDKQW 203


>gb|ABD63142.1| Retrotransposon gag protein [Asparagus officinalis]
          Length = 1788

 Score = 67.0 bits (162), Expect = 4e-08
 Identities = 33/111 (29%), Positives = 52/111 (46%), Gaps = 13/111 (11%)
 Frame = -3

Query: 1489 NDPRYCPYHQMVSHPLNQCFVVREKINEMWKNGVITFDKNYGSASVNMIS--YGQTPKKK 1316
            +DP YC YH+ + HP  +C+V ++ +  +    V+T      + S N+I+  +G  P   
Sbjct: 1665 DDPNYCRYHRFLGHPTRKCYVFKDILQNLVNANVLTLKPEQKTVSTNLIAVQFGDFPPVA 1724

Query: 1315 ITTSFKVINKIE-----------ASEGLVPYPTPDGQPLWVHPDLLEDENW 1196
                   + K E              GLVP     G+ +WVHPDL+ED+ W
Sbjct: 1725 AADGVIPVRKGEMHLKNTDLHNQKDRGLVPLTISKGEIMWVHPDLVEDQQW 1775


>gb|ABD63135.1| Retrotransposon gag protein [Asparagus officinalis]
          Length = 926

 Score = 67.0 bits (162), Expect = 4e-08
 Identities = 33/111 (29%), Positives = 52/111 (46%), Gaps = 13/111 (11%)
 Frame = -3

Query: 1489 NDPRYCPYHQMVSHPLNQCFVVREKINEMWKNGVITFDKNYGSASVNMIS--YGQTPKKK 1316
            +DP YC YH+ + HP  +C+V ++ +  +    V+T      + S N+I+  +G  P   
Sbjct: 803  DDPNYCRYHRFLGHPTRKCYVFKDILQNLVNANVLTLKPEQKTVSTNLIAVQFGDFPPVA 862

Query: 1315 ITTSFKVINKIE-----------ASEGLVPYPTPDGQPLWVHPDLLEDENW 1196
                   + K E              GLVP     G+ +WVHPDL+ED+ W
Sbjct: 863  AADGVIPVRKGEMHLKNTDLHNQKDRGLVPLTISKGEIMWVHPDLVEDQQW 913


>ref|XP_007015171.1| Uncharacterized protein TCM_040805 [Theobroma cacao]
            gi|508785534|gb|EOY32790.1| Uncharacterized protein
            TCM_040805 [Theobroma cacao]
          Length = 264

 Score = 60.1 bits (144), Expect = 5e-06
 Identities = 24/50 (48%), Positives = 37/50 (74%)
 Frame = -3

Query: 1489 NDPRYCPYHQMVSHPLNQCFVVREKINEMWKNGVITFDKNYGSASVNMIS 1340
            NDP YC YH++V HP+ +CFV++++I  ++K+G I F KN  SA+V  I+
Sbjct: 65   NDPNYCKYHRLVDHPIEKCFVLKDRIMGLYKDGKIEFKKNMVSANVASIT 114


>ref|XP_006386953.1| hypothetical protein POPTR_2731s00200g, partial [Populus trichocarpa]
            gi|550303449|gb|ERP45867.1| hypothetical protein
            POPTR_2731s00200g, partial [Populus trichocarpa]
          Length = 157

 Score = 59.3 bits (142), Expect = 9e-06
 Identities = 28/72 (38%), Positives = 47/72 (65%), Gaps = 2/72 (2%)
 Frame = -3

Query: 1489 NDPRYCPYHQMVSHPLNQCFVVREKINEMWKNGVITFDKNYGSASV-NMISYGQTPKKKI 1313
            ++P YC YH+++SHP+ +CFV+++KI  + KNG I FD    +++V  M++ G  P++ +
Sbjct: 75   DNPNYCKYHRLISHPIEKCFVLKDKIMRLHKNGDIVFDDEVAASNVTTMVNLG--PRQSL 132

Query: 1312 -TTSFKVINKIE 1280
             T SF     IE
Sbjct: 133  PTISFSSFEPIE 144


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