BLASTX nr result

ID: Cinnamomum24_contig00017894 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cinnamomum24_contig00017894
         (672 letters)

Database: ./nr 
           69,698,275 sequences; 24,982,196,650 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003612076.1| GRF zinc finger containing protein [Medicago...    54   3e-06
ref|XP_003593148.1| GRF zinc finger containing protein [Medicago...    54   5e-06
ref|XP_003589474.1| hypothetical protein MTR_1g025050 [Medicago ...    57   7e-06

>ref|XP_003612076.1| GRF zinc finger containing protein [Medicago truncatula]
           gi|355513411|gb|AES95034.1| GRF zinc finger protein
           [Medicago truncatula]
          Length = 116

 Score = 53.5 bits (127), Expect(2) = 3e-06
 Identities = 24/47 (51%), Positives = 30/47 (63%)
 Frame = -3

Query: 205 SSSSHDHRCDGQVQSRIFCHCGKLSPIVTTKTMANPGRRFYGCGNYF 65
           +SSS         +SR+ C+CG  SP+VT  T  NPGRRF+GCG YF
Sbjct: 5   NSSSTVFGSSSMAKSRLVCYCGVESPLVTAWTDENPGRRFHGCGKYF 51



 Score = 25.0 bits (53), Expect(2) = 3e-06
 Identities = 8/16 (50%), Positives = 9/16 (56%)
 Frame = -2

Query: 50  CGFFSWIDEELPPHDK 3
           C FF W D E+P   K
Sbjct: 56  CSFFRWFDPEVPERQK 71


>ref|XP_003593148.1| GRF zinc finger containing protein [Medicago truncatula]
           gi|355482196|gb|AES63399.1| GRF zinc finger protein
           [Medicago truncatula]
          Length = 116

 Score = 53.5 bits (127), Expect(2) = 5e-06
 Identities = 24/47 (51%), Positives = 30/47 (63%)
 Frame = -3

Query: 205 SSSSHDHRCDGQVQSRIFCHCGKLSPIVTTKTMANPGRRFYGCGNYF 65
           +SSS         +SR+ C+CG  SP+VT  T  NPGRRF+GCG YF
Sbjct: 5   NSSSTVFGSSSMAKSRLVCYCGVESPLVTAWTDENPGRRFHGCGKYF 51



 Score = 24.3 bits (51), Expect(2) = 5e-06
 Identities = 8/16 (50%), Positives = 9/16 (56%)
 Frame = -2

Query: 50  CGFFSWIDEELPPHDK 3
           C FF W D E+P   K
Sbjct: 56  CSFFRWFDPEVPERRK 71


>ref|XP_003589474.1| hypothetical protein MTR_1g025050 [Medicago truncatula]
           gi|355478522|gb|AES59725.1| GRF zinc finger protein
           [Medicago truncatula]
          Length = 73

 Score = 57.4 bits (137), Expect = 7e-06
 Identities = 31/72 (43%), Positives = 41/72 (56%)
 Frame = -3

Query: 229 PHQDISLVSSSSHDHRCDGQVQSRIFCHCGKLSPIVTTKTMANPGRRFYGCGNYFGPANP 50
           P+   S VS SS   +      +++ C+CG  SP+VT  T  NPGRRF+GCGNY      
Sbjct: 4   PYSSTSTVSGSSCLDK------TKLVCYCGVESPLVTAWTDQNPGRRFHGCGNYL-QRRK 56

Query: 49  AGFLVGSMKSFL 14
             F VGS++ FL
Sbjct: 57  CSFFVGSIQKFL 68


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